Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sh3yl1O08641 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3yl1O08641 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3yl1O08641 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Sh3yl1O08641 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3yl1O08641 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3yl1O08641 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3yl1O08641 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3yl1O08641 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3yl1O08641 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3yl1O08641 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3yl1O08641 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3yl1O08641 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3yl1O08641 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh3yl1O08641 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Gm45328-201ENSMUST00000210942 917 ntBASIC15.31■□□□□ 0.04
Sh3yl1O08641 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh3yl1O08641 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3yl1O08641 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Sh3yl1O08641 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3yl1O08641 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3yl1O08641 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.3■□□□□ 0.04
Sh3yl1O08641 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sh3yl1O08641 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.3■□□□□ 0.04
Sh3yl1O08641 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3yl1O08641 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3yl1O08641 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3yl1O08641 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3yl1O08641 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3yl1O08641 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh3yl1O08641 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Sh3yl1O08641 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3yl1O08641 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3yl1O08641 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3yl1O08641 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3yl1O08641 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sh3yl1O08641 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.29■□□□□ 0.04
Sh3yl1O08641 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3yl1O08641 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3yl1O08641 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3yl1O08641 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3yl1O08641 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3yl1O08641 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3yl1O08641 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3yl1O08641 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3yl1O08641 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3yl1O08641 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3yl1O08641 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3yl1O08641 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3yl1O08641 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sh3yl1O08641 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sh3yl1O08641 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sh3yl1O08641 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3yl1O08641 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Sh3yl1O08641 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3yl1O08641 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.29■□□□□ 0.04
Sh3yl1O08641 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3yl1O08641 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh3yl1O08641 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.28■□□□□ 0.04
Sh3yl1O08641 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3yl1O08641 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Sh3yl1O08641 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3yl1O08641 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3yl1O08641 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3yl1O08641 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3yl1O08641 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3yl1O08641 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Sh3yl1O08641 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Sh3yl1O08641 Olfr129-201ENSMUST00000122318 993 ntBASIC15.28■□□□□ 0.04
Sh3yl1O08641 Gm27742-201ENSMUST00000184667 60 ntBASIC15.28■□□□□ 0.04
Sh3yl1O08641 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.28■□□□□ 0.04
Sh3yl1O08641 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.28■□□□□ 0.04
Sh3yl1O08641 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3yl1O08641 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3yl1O08641 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3yl1O08641 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh3yl1O08641 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms