Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Usp35M0QWN7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Gm13884-201ENSMUST00000118103 829 ntBASIC17.2■□□□□ 0.34
Usp35M0QWN7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp35M0QWN7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp35M0QWN7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp35M0QWN7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp35M0QWN7 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp35M0QWN7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp35M0QWN7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp35M0QWN7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Usp35M0QWN7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Usp35M0QWN7 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.19■□□□□ 0.34
Usp35M0QWN7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp35M0QWN7 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp35M0QWN7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp35M0QWN7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.19■□□□□ 0.34
Usp35M0QWN7 Gm43514-201ENSMUST00000198852 424 ntBASIC17.19■□□□□ 0.34
Usp35M0QWN7 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.19■□□□□ 0.34
Usp35M0QWN7 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp35M0QWN7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp35M0QWN7 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp35M0QWN7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp35M0QWN7 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp35M0QWN7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp35M0QWN7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp35M0QWN7 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp35M0QWN7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Usp35M0QWN7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp35M0QWN7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Usp35M0QWN7 Gm13312-201ENSMUST00000119631 718 ntBASIC17.18■□□□□ 0.34
Usp35M0QWN7 Rprl3-201ENSMUST00000157400 290 ntBASIC17.18■□□□□ 0.34
Usp35M0QWN7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Usp35M0QWN7 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp35M0QWN7 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp35M0QWN7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp35M0QWN7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp35M0QWN7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp35M0QWN7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp35M0QWN7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp35M0QWN7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp35M0QWN7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp35M0QWN7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp35M0QWN7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp35M0QWN7 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Usp35M0QWN7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp35M0QWN7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp35M0QWN7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp35M0QWN7 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp35M0QWN7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp35M0QWN7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp35M0QWN7 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.17■□□□□ 0.34
Usp35M0QWN7 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp35M0QWN7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp35M0QWN7 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp35M0QWN7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp35M0QWN7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp35M0QWN7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp35M0QWN7 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp35M0QWN7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp35M0QWN7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp35M0QWN7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp35M0QWN7 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.16■□□□□ 0.34
Usp35M0QWN7 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Usp35M0QWN7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp35M0QWN7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.16■□□□□ 0.34
Usp35M0QWN7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Usp35M0QWN7 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp35M0QWN7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.16■□□□□ 0.34
Usp35M0QWN7 Gm10052-201ENSMUST00000168019 960 ntBASIC17.16■□□□□ 0.34
Usp35M0QWN7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Usp35M0QWN7 Gm6443-201ENSMUST00000203599 874 ntBASIC17.16■□□□□ 0.34
Usp35M0QWN7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp35M0QWN7 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.16■□□□□ 0.34
Usp35M0QWN7 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms