Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Sgo2bJ3QMK1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Sgo2bJ3QMK1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sgo2bJ3QMK1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sgo2bJ3QMK1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sgo2bJ3QMK1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sgo2bJ3QMK1 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
Sgo2bJ3QMK1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sgo2bJ3QMK1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sgo2bJ3QMK1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sgo2bJ3QMK1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sgo2bJ3QMK1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sgo2bJ3QMK1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sgo2bJ3QMK1 Gm5587-201ENSMUST00000206270 674 ntBASIC16.02■□□□□ 0.16
Sgo2bJ3QMK1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sgo2bJ3QMK1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.02■□□□□ 0.16
Sgo2bJ3QMK1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sgo2bJ3QMK1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Sgo2bJ3QMK1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Sgo2bJ3QMK1 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.02■□□□□ 0.15
Sgo2bJ3QMK1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sgo2bJ3QMK1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sgo2bJ3QMK1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sgo2bJ3QMK1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sgo2bJ3QMK1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.02■□□□□ 0.15
Sgo2bJ3QMK1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sgo2bJ3QMK1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Sgo2bJ3QMK1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.01■□□□□ 0.15
Sgo2bJ3QMK1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Sgo2bJ3QMK1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.01■□□□□ 0.15
Sgo2bJ3QMK1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sgo2bJ3QMK1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Sgo2bJ3QMK1 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sgo2bJ3QMK1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.01■□□□□ 0.15
Sgo2bJ3QMK1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sgo2bJ3QMK1 Gm6345-202ENSMUST00000180900 204 ntBASIC16.01■□□□□ 0.15
Sgo2bJ3QMK1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.01■□□□□ 0.15
Sgo2bJ3QMK1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sgo2bJ3QMK1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sgo2bJ3QMK1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sgo2bJ3QMK1 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sgo2bJ3QMK1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sgo2bJ3QMK1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sgo2bJ3QMK1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.01■□□□□ 0.15
Sgo2bJ3QMK1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Sgo2bJ3QMK1 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.01■□□□□ 0.15
Sgo2bJ3QMK1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Sgo2bJ3QMK1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sgo2bJ3QMK1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Sgo2bJ3QMK1 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Sgo2bJ3QMK1 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Sgo2bJ3QMK1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16■□□□□ 0.15
Sgo2bJ3QMK1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sgo2bJ3QMK1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16■□□□□ 0.15
Sgo2bJ3QMK1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sgo2bJ3QMK1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sgo2bJ3QMK1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Sgo2bJ3QMK1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sgo2bJ3QMK1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Sgo2bJ3QMK1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sgo2bJ3QMK1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Sgo2bJ3QMK1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Sgo2bJ3QMK1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sgo2bJ3QMK1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Sgo2bJ3QMK1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sgo2bJ3QMK1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sgo2bJ3QMK1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sgo2bJ3QMK1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.99■□□□□ 0.15
Sgo2bJ3QMK1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Sgo2bJ3QMK1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sgo2bJ3QMK1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Sgo2bJ3QMK1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sgo2bJ3QMK1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sgo2bJ3QMK1 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.99■□□□□ 0.15
Sgo2bJ3QMK1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sgo2bJ3QMK1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms