Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tmf1B9EKI3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tmf1B9EKI3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tmf1B9EKI3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Tmf1B9EKI3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tmf1B9EKI3 Gm5837-201ENSMUST00000191844 1369 ntBASIC21.67■■□□□ 1.06
Tmf1B9EKI3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tmf1B9EKI3 Gm8097-201ENSMUST00000117903 829 ntBASIC21.67■■□□□ 1.06
Tmf1B9EKI3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC21.67■■□□□ 1.06
Tmf1B9EKI3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
Tmf1B9EKI3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC21.67■■□□□ 1.06
Tmf1B9EKI3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tmf1B9EKI3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tmf1B9EKI3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tmf1B9EKI3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC21.67■■□□□ 1.06
Tmf1B9EKI3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tmf1B9EKI3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tmf1B9EKI3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Gm8784-201ENSMUST00000222096 1435 ntBASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Gm11452-201ENSMUST00000122376 690 ntBASIC21.66■■□□□ 1.06
Tmf1B9EKI3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Gm8655-201ENSMUST00000221159 852 ntBASIC21.66■■□□□ 1.06
Tmf1B9EKI3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Gm28265-201ENSMUST00000188201 2319 ntBASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmf1B9EKI3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tmf1B9EKI3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Gm4609-201ENSMUST00000106443 1002 ntBASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Gm5138-201ENSMUST00000113842 1002 ntBASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Gm15191-201ENSMUST00000117933 1000 ntBASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Gm12182-201ENSMUST00000118655 1008 ntBASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Gm13882-201ENSMUST00000120886 1002 ntBASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Gm10284-201ENSMUST00000145057 1005 ntBASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Gm6257-201ENSMUST00000163864 910 ntBASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Gm10481-201ENSMUST00000179228 1002 ntBASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Gm2574-201ENSMUST00000181051 1002 ntBASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Gm3200-201ENSMUST00000181493 1002 ntBASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Gm8825-201ENSMUST00000182565 998 ntBASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Gm4518-201ENSMUST00000182638 718 ntBASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Gm8330-201ENSMUST00000182754 1008 ntBASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Gm4575-201ENSMUST00000182991 1002 ntBASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Gm8709-201ENSMUST00000183230 1012 ntBASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Gm10293-201ENSMUST00000076317 1002 ntBASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Gm6316-201ENSMUST00000082064 1020 ntBASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tmf1B9EKI3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Tmf1B9EKI3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Tmf1B9EKI3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Tmf1B9EKI3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Tmf1B9EKI3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Tmf1B9EKI3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tmf1B9EKI3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tmf1B9EKI3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tmf1B9EKI3 Gm4535-201ENSMUST00000182274 558 ntBASIC21.64■■□□□ 1.05
Tmf1B9EKI3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC21.64■■□□□ 1.05
Tmf1B9EKI3 Gm6376-201ENSMUST00000209407 580 ntBASIC21.64■■□□□ 1.05
Tmf1B9EKI3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tmf1B9EKI3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tmf1B9EKI3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tmf1B9EKI3 Gm10355-201ENSMUST00000097146 517 ntBASIC21.64■■□□□ 1.05
Tmf1B9EKI3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Tmf1B9EKI3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Tmf1B9EKI3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Tmf1B9EKI3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms