Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.77■□□□□ 0.27
Scn1aA2APX8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Scn1aA2APX8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn1aA2APX8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn1aA2APX8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn1aA2APX8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn1aA2APX8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Scn1aA2APX8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Scn1aA2APX8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Scn1aA2APX8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn1aA2APX8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.76■□□□□ 0.27
Scn1aA2APX8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn1aA2APX8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Scn1aA2APX8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn1aA2APX8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn1aA2APX8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn1aA2APX8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Scn1aA2APX8 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn1aA2APX8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.76■□□□□ 0.27
Scn1aA2APX8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.76■□□□□ 0.27
Scn1aA2APX8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn1aA2APX8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn1aA2APX8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn1aA2APX8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn1aA2APX8 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.76■□□□□ 0.27
Scn1aA2APX8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.76■□□□□ 0.27
Scn1aA2APX8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn1aA2APX8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn1aA2APX8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn1aA2APX8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn1aA2APX8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn1aA2APX8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Scn1aA2APX8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn1aA2APX8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn1aA2APX8 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Scn1aA2APX8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn1aA2APX8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn1aA2APX8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Scn1aA2APX8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Scn1aA2APX8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn1aA2APX8 Grk6-207ENSMUST00000225925 2769 ntBASIC16.75■□□□□ 0.27
Scn1aA2APX8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.75■□□□□ 0.27
Scn1aA2APX8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn1aA2APX8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn1aA2APX8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Scn1aA2APX8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn1aA2APX8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn1aA2APX8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.75■□□□□ 0.27
Scn1aA2APX8 Gm27525-201ENSMUST00000184465 107 ntBASIC16.75■□□□□ 0.27
Scn1aA2APX8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.75■□□□□ 0.27
Scn1aA2APX8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn1aA2APX8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn1aA2APX8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn1aA2APX8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn1aA2APX8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn1aA2APX8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.75■□□□□ 0.27
Scn1aA2APX8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn1aA2APX8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn1aA2APX8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Scn1aA2APX8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn1aA2APX8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn1aA2APX8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.74■□□□□ 0.27
Scn1aA2APX8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn1aA2APX8 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.73■□□□□ 0.27
Scn1aA2APX8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn1aA2APX8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn1aA2APX8 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.73■□□□□ 0.27
Scn1aA2APX8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn1aA2APX8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn1aA2APX8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn1aA2APX8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn1aA2APX8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn1aA2APX8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn1aA2APX8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn1aA2APX8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Scn1aA2APX8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn1aA2APX8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms