Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Gm25745-201ENSMUST00000174945 133 ntBASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Gm27867-201ENSMUST00000184778 125 ntBASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm12497-201ENSMUST00000138778 237 ntBASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv12-1A0A0B4J1H0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv12-1A0A0B4J1H0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.13□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.13□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.13□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trbv12-1A0A0B4J1H0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms