Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh7A0A0A6YY83 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdh7A0A0A6YY83 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh7A0A0A6YY83 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdh7A0A0A6YY83 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh7A0A0A6YY83 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh7A0A0A6YY83 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh7A0A0A6YY83 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh7A0A0A6YY83 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh7A0A0A6YY83 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh7A0A0A6YY83 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh7A0A0A6YY83 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.53■□□□□ 0.24
Pcdh7A0A0A6YY83 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh7A0A0A6YY83 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdh7A0A0A6YY83 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdh7A0A0A6YY83 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh7A0A0A6YY83 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh7A0A0A6YY83 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh7A0A0A6YY83 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh7A0A0A6YY83 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh7A0A0A6YY83 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh7A0A0A6YY83 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdh7A0A0A6YY83 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh7A0A0A6YY83 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh7A0A0A6YY83 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdh7A0A0A6YY83 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.52■□□□□ 0.24
Pcdh7A0A0A6YY83 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh7A0A0A6YY83 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Pcdh7A0A0A6YY83 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh7A0A0A6YY83 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh7A0A0A6YY83 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh7A0A0A6YY83 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdh7A0A0A6YY83 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh7A0A0A6YY83 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh7A0A0A6YY83 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh7A0A0A6YY83 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh7A0A0A6YY83 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pcdh7A0A0A6YY83 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh7A0A0A6YY83 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh7A0A0A6YY83 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh7A0A0A6YY83 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.52■□□□□ 0.23
Pcdh7A0A0A6YY83 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh7A0A0A6YY83 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Pcdh7A0A0A6YY83 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Gm25406-201ENSMUST00000157599 105 ntBASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Gm6257-201ENSMUST00000163864 910 ntBASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pcdh7A0A0A6YY83 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh7A0A0A6YY83 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh7A0A0A6YY83 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.49■□□□□ 0.23
Pcdh7A0A0A6YY83 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh7A0A0A6YY83 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Pcdh7A0A0A6YY83 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh7A0A0A6YY83 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh7A0A0A6YY83 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms