Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.78□□□□□ -0.36
Trav17A0A075B655 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav17A0A075B655 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav17A0A075B655 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav17A0A075B655 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav17A0A075B655 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav17A0A075B655 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav17A0A075B655 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav17A0A075B655 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trav17A0A075B655 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav17A0A075B655 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.78□□□□□ -0.36
Trav17A0A075B655 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.78□□□□□ -0.36
Trav17A0A075B655 Timm23-208ENSMUST00000226683 750 ntBASIC12.78□□□□□ -0.36
Trav17A0A075B655 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav17A0A075B655 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav17A0A075B655 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav17A0A075B655 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav17A0A075B655 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav17A0A075B655 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav17A0A075B655 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav17A0A075B655 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav17A0A075B655 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav17A0A075B655 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav17A0A075B655 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav17A0A075B655 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav17A0A075B655 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav17A0A075B655 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Trav17A0A075B655 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav17A0A075B655 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav17A0A075B655 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav17A0A075B655 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav17A0A075B655 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.77□□□□□ -0.36
Trav17A0A075B655 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav17A0A075B655 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav17A0A075B655 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav17A0A075B655 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav17A0A075B655 Gm18115-201ENSMUST00000221209 621 ntBASIC12.77□□□□□ -0.37
Trav17A0A075B655 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.77□□□□□ -0.37
Trav17A0A075B655 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav17A0A075B655 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav17A0A075B655 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav17A0A075B655 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav17A0A075B655 App-207ENSMUST00000227737 2827 ntBASIC12.77□□□□□ -0.37
Trav17A0A075B655 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav17A0A075B655 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav17A0A075B655 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav17A0A075B655 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav17A0A075B655 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav17A0A075B655 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav17A0A075B655 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav17A0A075B655 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav17A0A075B655 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.77□□□□□ -0.37
Trav17A0A075B655 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav17A0A075B655 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav17A0A075B655 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav17A0A075B655 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.76□□□□□ -0.37
Trav17A0A075B655 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Phf7-203ENSMUST00000226565 1971 ntBASIC12.76□□□□□ -0.37
Trav17A0A075B655 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav17A0A075B655 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Trav17A0A075B655 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav17A0A075B655 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav17A0A075B655 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav17A0A075B655 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav17A0A075B655 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav17A0A075B655 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav17A0A075B655 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav17A0A075B655 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav17A0A075B655 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav17A0A075B655 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav17A0A075B655 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.75□□□□□ -0.37
Trav17A0A075B655 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav17A0A075B655 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav17A0A075B655 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav17A0A075B655 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms