Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-2A0A075B638 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav4-2A0A075B638 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-2A0A075B638 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav4-2A0A075B638 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-2A0A075B638 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-2A0A075B638 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Gm13186-201ENSMUST00000118031 316 ntBASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Gm12933-201ENSMUST00000120203 872 ntBASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-2A0A075B638 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 BC037039-201ENSMUST00000192003 2205 ntBASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Gm42569-201ENSMUST00000200539 472 ntBASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-2A0A075B638 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-2A0A075B638 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms