Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16nA0A075B634 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16nA0A075B634 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Trav16nA0A075B634 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16nA0A075B634 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16nA0A075B634 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav16nA0A075B634 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav16nA0A075B634 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16nA0A075B634 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16nA0A075B634 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav16nA0A075B634 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16nA0A075B634 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav16nA0A075B634 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav16nA0A075B634 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav16nA0A075B634 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav16nA0A075B634 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16nA0A075B634 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16nA0A075B634 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav16nA0A075B634 Asic1-205ENSMUST00000228185 1818 ntBASIC12.18□□□□□ -0.46
Trav16nA0A075B634 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16nA0A075B634 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16nA0A075B634 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav16nA0A075B634 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Gm37179-201ENSMUST00000194862 823 ntBASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Gm10602-201ENSMUST00000098239 609 ntBASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav16nA0A075B634 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Actl10-202ENSMUST00000226583 1501 ntBASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Gm12085-201ENSMUST00000119263 940 ntBASIC12.16□□□□□ -0.46
Trav16nA0A075B634 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav16nA0A075B634 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16nA0A075B634 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms