Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 App-207ENSMUST00000227737 2827 ntBASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Gm10231-201ENSMUST00000181584 441 ntBASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Gm10175-202ENSMUST00000208752 441 ntBASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav1A0A075B5Z4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 Gm5587-201ENSMUST00000206270 674 ntBASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav1A0A075B5Z4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Gm6623-201ENSMUST00000173570 544 ntBASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav1A0A075B5Z4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav1A0A075B5Z4 Asic1-205ENSMUST00000228185 1818 ntBASIC14.89□□□□□ -0.03
Trav1A0A075B5Z4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav1A0A075B5Z4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav1A0A075B5Z4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav1A0A075B5Z4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav1A0A075B5Z4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav1A0A075B5Z4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav1A0A075B5Z4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav1A0A075B5Z4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav1A0A075B5Z4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav1A0A075B5Z4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav1A0A075B5Z4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav1A0A075B5Z4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav1A0A075B5Z4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms