Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 AL391903.3-201ENST00000612158 163 ntBASIC0.77□□□□□ -2.29
CCL28Q9NRJ3 AC012676.2-201ENST00000619258 186 ntBASIC0.77□□□□□ -2.29
CCL28Q9NRJ3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.77□□□□□ -2.29
CCL28Q9NRJ3 AL606534.2-204ENST00000635008 178 ntBASIC0.77□□□□□ -2.29
CCL28Q9NRJ3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
CCL28Q9NRJ3 AL391987.6-201ENST00000305671 199 ntBASIC0.76□□□□□ -2.29
CCL28Q9NRJ3 MIR378A-201ENST00000362177 66 ntBASIC0.76□□□□□ -2.29
CCL28Q9NRJ3 Y_RNA.5-201ENST00000362334 102 ntBASIC0.76□□□□□ -2.29
CCL28Q9NRJ3 Y_RNA.140-201ENST00000363474 103 ntBASIC0.76□□□□□ -2.29
CCL28Q9NRJ3 RNA5SP99-201ENST00000364020 114 ntBASIC0.76□□□□□ -2.29
CCL28Q9NRJ3 Y_RNA.331-201ENST00000365267 102 ntBASIC0.76□□□□□ -2.29
CCL28Q9NRJ3 MIR15B-201ENST00000385045 98 ntBASIC0.76□□□□□ -2.29
CCL28Q9NRJ3 RPL23AP36-201ENST00000413895 458 ntBASIC0.76□□□□□ -2.29
CCL28Q9NRJ3 MRPL35P3-201ENST00000421557 364 ntBASIC0.76□□□□□ -2.29
CCL28Q9NRJ3 AC002429.1-201ENST00000437672 148 ntBASIC0.76□□□□□ -2.29
CCL28Q9NRJ3 HMGN2P32-201ENST00000444648 269 ntBASIC0.76□□□□□ -2.29
CCL28Q9NRJ3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.76□□□□□ -2.29
CCL28Q9NRJ3 RNU6-507P-201ENST00000516045 100 ntBASIC0.76□□□□□ -2.29
CCL28Q9NRJ3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.76□□□□□ -2.29
CCL28Q9NRJ3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 snoU2-30.1-201ENST00000365012 70 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 Y_RNA.341-201ENST00000365341 102 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 Y_RNA.368-201ENST00000365547 113 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 AC117470.1-201ENST00000381974 330 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 RNU6-1323P-201ENST00000384025 107 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 Y_RNA.456-201ENST00000384232 111 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 Y_RNA.458-201ENST00000384240 102 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 Y_RNA.526-201ENST00000384572 110 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 MIR516B2-201ENST00000385190 85 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 MIR136-201ENST00000385207 82 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 RNU6-131P-201ENST00000391144 107 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 MLLT10P1-201ENST00000418346 262 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 AC024067.1-201ENST00000426199 223 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 snoU13.25-201ENST00000458945 104 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 RPS26P48-201ENST00000491713 339 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 UBL5P1-201ENST00000507979 193 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 SNORD45.4-201ENST00000516629 73 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 RNU7-116P-201ENST00000516940 62 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 AC090142.3-201ENST00000519012 385 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 MIR3192-201ENST00000584920 77 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 DEFB117-201ENST00000602356 141 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 PRELID3BP2-201ENST00000605362 201 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 AC011373.1-201ENST00000607270 237 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 SNORD58B-201ENST00000607313 66 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 AC112487.2-201ENST00000637950 304 ntBASIC0.75□□□□□ -2.29
CCL28Q9NRJ3 RNU6-1084P-201ENST00000362498 107 ntBASIC0.74□□□□□ -2.29
CCL28Q9NRJ3 Y_RNA.58-201ENST00000362807 102 ntBASIC0.74□□□□□ -2.29
CCL28Q9NRJ3 SNORD81.1-201ENST00000363064 77 ntBASIC0.74□□□□□ -2.29
CCL28Q9NRJ3 Y_RNA.154-201ENST00000363624 102 ntBASIC0.74□□□□□ -2.29
CCL28Q9NRJ3 SNORD114-24-201ENST00000365029 72 ntBASIC0.74□□□□□ -2.29
CCL28Q9NRJ3 Y_RNA.310-201ENST00000365063 113 ntBASIC0.74□□□□□ -2.29
CCL28Q9NRJ3 RNY3P1-201ENST00000365085 102 ntBASIC0.74□□□□□ -2.29
CCL28Q9NRJ3 RNY3-201ENST00000365484 102 ntBASIC0.74□□□□□ -2.29
CCL28Q9NRJ3 RNU6-969P-201ENST00000383900 105 ntBASIC0.74□□□□□ -2.29
CCL28Q9NRJ3 AL590004.1-201ENST00000405321 300 ntBASIC0.74□□□□□ -2.29
CCL28Q9NRJ3 SNRPGP10-201ENST00000432323 225 ntBASIC0.74□□□□□ -2.29
CCL28Q9NRJ3 RNU7-21P-201ENST00000459430 62 ntBASIC0.74□□□□□ -2.29
CCL28Q9NRJ3 RNU7-110P-201ENST00000516891 62 ntBASIC0.74□□□□□ -2.29
CCL28Q9NRJ3 Y_RNA.713-201ENST00000517013 96 ntBASIC0.74□□□□□ -2.29
CCL28Q9NRJ3 Y_RNA.714-201ENST00000517065 90 ntBASIC0.74□□□□□ -2.29
CCL28Q9NRJ3 SNORA74.3-201ENST00000517108 154 ntBASIC0.74□□□□□ -2.29
CCL28Q9NRJ3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.74□□□□□ -2.29
CCL28Q9NRJ3 MIR6715A-201ENST00000615929 79 ntBASIC0.74□□□□□ -2.29
CCL28Q9NRJ3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
CCL28Q9NRJ3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
CCL28Q9NRJ3 AC008163.1-202ENST00000636004 2889 ntBASIC0.73□□□□□ -2.29
CCL28Q9NRJ3 Y_RNA.315-201ENST00000365117 102 ntBASIC0.73□□□□□ -2.29
CCL28Q9NRJ3 SNORD14.1-201ENST00000365609 90 ntBASIC0.73□□□□□ -2.29
CCL28Q9NRJ3 Y_RNA.439-201ENST00000384119 94 ntBASIC0.73□□□□□ -2.29
CCL28Q9NRJ3 SNORD63-201ENST00000384262 68 ntBASIC0.73□□□□□ -2.29
CCL28Q9NRJ3 Y_RNA.551-201ENST00000384661 102 ntBASIC0.73□□□□□ -2.29
CCL28Q9NRJ3 MIR200A-201ENST00000384875 90 ntBASIC0.73□□□□□ -2.29
CCL28Q9NRJ3 SNORA75.2-201ENST00000391138 150 ntBASIC0.73□□□□□ -2.29
CCL28Q9NRJ3 SNORA75.3-201ENST00000391231 150 ntBASIC0.73□□□□□ -2.29
CCL28Q9NRJ3 MTND1P14-201ENST00000427400 950 ntBASIC0.73□□□□□ -2.29
CCL28Q9NRJ3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.73□□□□□ -2.29
CCL28Q9NRJ3 SNORD124-201ENST00000459577 104 ntBASIC0.73□□□□□ -2.29
CCL28Q9NRJ3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.73□□□□□ -2.29
CCL28Q9NRJ3 MTND3P22-201ENST00000510932 243 ntBASIC0.73□□□□□ -2.29
CCL28Q9NRJ3 MIR4524B-201ENST00000581569 115 ntBASIC0.73□□□□□ -2.29
CCL28Q9NRJ3 MIR4661-201ENST00000582720 75 ntBASIC0.73□□□□□ -2.29
CCL28Q9NRJ3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.73□□□□□ -2.29
CCL28Q9NRJ3 AC104984.5-201ENST00000586878 94 ntBASIC0.73□□□□□ -2.29
CCL28Q9NRJ3 AP003357.1-201ENST00000604497 148 ntBASIC0.73□□□□□ -2.29
CCL28Q9NRJ3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.72□□□□□ -2.29
CCL28Q9NRJ3 SNORD50B-201ENST00000364995 70 ntBASIC0.72□□□□□ -2.29
CCL28Q9NRJ3 RNY3P14-201ENST00000384309 102 ntBASIC0.72□□□□□ -2.29
CCL28Q9NRJ3 RNY1P14-201ENST00000384426 108 ntBASIC0.72□□□□□ -2.29
CCL28Q9NRJ3 RNU7-90P-201ENST00000459216 62 ntBASIC0.72□□□□□ -2.29
CCL28Q9NRJ3 U8.20-201ENST00000459445 131 ntBASIC0.72□□□□□ -2.29
CCL28Q9NRJ3 RNU6-475P-201ENST00000516073 104 ntBASIC0.72□□□□□ -2.29
CCL28Q9NRJ3 AC024405.2-202ENST00000532731 184 ntBASIC0.72□□□□□ -2.29
CCL28Q9NRJ3 AC127455.1-201ENST00000565496 145 ntBASIC0.72□□□□□ -2.29
CCL28Q9NRJ3 POLR3GP1-201ENST00000594073 261 ntBASIC0.72□□□□□ -2.29
CCL28Q9NRJ3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.72□□□□□ -2.29
CCL28Q9NRJ3 AL442644.1-201ENST00000454390 3105 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 RNU4-73P-201ENST00000363164 141 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 Y_RNA.197-201ENST00000364004 102 ntBASIC0.71□□□□□ -2.3
CCL28Q9NRJ3 Y_RNA.203-201ENST00000364106 102 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms