Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AL096861.1-201ENST00000610899 123 ntBASIC1.12□□□□□ -2.23
VPS33AQ96AX1 AC012676.2-201ENST00000619258 186 ntBASIC1.12□□□□□ -2.23
VPS33AQ96AX1 RNU4-73P-201ENST00000363164 141 ntBASIC1.11□□□□□ -2.23
VPS33AQ96AX1 Y_RNA.112-201ENST00000363250 102 ntBASIC1.11□□□□□ -2.23
VPS33AQ96AX1 Y_RNA.197-201ENST00000364004 102 ntBASIC1.11□□□□□ -2.23
VPS33AQ96AX1 snoU2-30.1-201ENST00000365012 70 ntBASIC1.11□□□□□ -2.23
VPS33AQ96AX1 Y_RNA.363-201ENST00000365529 113 ntBASIC1.11□□□□□ -2.23
VPS33AQ96AX1 RNU6-131P-201ENST00000391144 107 ntBASIC1.11□□□□□ -2.23
VPS33AQ96AX1 MRPL35P3-201ENST00000421557 364 ntBASIC1.11□□□□□ -2.23
VPS33AQ96AX1 AC245047.8-201ENST00000456455 284 ntBASIC1.11□□□□□ -2.23
VPS33AQ96AX1 SNORD45.4-201ENST00000516629 73 ntBASIC1.11□□□□□ -2.23
VPS33AQ96AX1 RNU7-110P-201ENST00000516891 62 ntBASIC1.11□□□□□ -2.23
VPS33AQ96AX1 AL391903.3-201ENST00000612158 163 ntBASIC1.11□□□□□ -2.23
VPS33AQ96AX1 RNU6-1084P-201ENST00000362498 107 ntBASIC1.1□□□□□ -2.23
VPS33AQ96AX1 SNORD81.1-201ENST00000363064 77 ntBASIC1.1□□□□□ -2.23
VPS33AQ96AX1 RNY1P14-201ENST00000384426 108 ntBASIC1.1□□□□□ -2.23
VPS33AQ96AX1 MIR136-201ENST00000385207 82 ntBASIC1.1□□□□□ -2.23
VPS33AQ96AX1 Y_RNA.579-201ENST00000390939 94 ntBASIC1.1□□□□□ -2.23
VPS33AQ96AX1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS33AQ96AX1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS33AQ96AX1 RPS29P28-201ENST00000446439 141 ntBASIC1.1□□□□□ -2.23
VPS33AQ96AX1 MIR4795-201ENST00000584182 89 ntBASIC1.1□□□□□ -2.23
VPS33AQ96AX1 DEFB117-201ENST00000602356 141 ntBASIC1.1□□□□□ -2.23
VPS33AQ96AX1 AP003357.1-201ENST00000604497 148 ntBASIC1.1□□□□□ -2.23
VPS33AQ96AX1 PRELID3BP2-201ENST00000605362 201 ntBASIC1.1□□□□□ -2.23
VPS33AQ96AX1 LARP7P1-201ENST00000605576 316 ntBASIC1.1□□□□□ -2.23
VPS33AQ96AX1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS33AQ96AX1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
VPS33AQ96AX1 MLLT10P1-201ENST00000418346 262 ntBASIC1.09□□□□□ -2.23
VPS33AQ96AX1 SNRPGP10-201ENST00000432323 225 ntBASIC1.09□□□□□ -2.23
VPS33AQ96AX1 AC002429.1-201ENST00000437672 148 ntBASIC1.09□□□□□ -2.23
VPS33AQ96AX1 RNU7-95P-201ENST00000459222 64 ntBASIC1.09□□□□□ -2.23
VPS33AQ96AX1 SNORA74.3-201ENST00000517108 154 ntBASIC1.09□□□□□ -2.23
VPS33AQ96AX1 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.09□□□□□ -2.23
VPS33AQ96AX1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
VPS33AQ96AX1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.09□□□□□ -2.23
VPS33AQ96AX1 POLR3GP1-201ENST00000594073 261 ntBASIC1.09□□□□□ -2.23
VPS33AQ96AX1 AL133255.1-201ENST00000606374 441 ntBASIC1.09□□□□□ -2.23
VPS33AQ96AX1 Y_RNA.804-201ENST00000615262 101 ntBASIC1.09□□□□□ -2.23
VPS33AQ96AX1 AC007742.2-201ENST00000618226 398 ntBASIC1.09□□□□□ -2.23
VPS33AQ96AX1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.09□□□□□ -2.24
VPS33AQ96AX1 SNORA22-201ENST00000383907 134 ntBASIC1.08□□□□□ -2.24
VPS33AQ96AX1 SNORA22C-201ENST00000384614 134 ntBASIC1.08□□□□□ -2.24
VPS33AQ96AX1 RNU6-21P-201ENST00000384710 107 ntBASIC1.08□□□□□ -2.24
VPS33AQ96AX1 SNORA11.2-201ENST00000408318 127 ntBASIC1.08□□□□□ -2.24
VPS33AQ96AX1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.08□□□□□ -2.24
VPS33AQ96AX1 MTND1P14-201ENST00000427400 950 ntBASIC1.08□□□□□ -2.24
VPS33AQ96AX1 HMGN1P10-201ENST00000474557 553 ntBASIC1.08□□□□□ -2.24
VPS33AQ96AX1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.08□□□□□ -2.24
VPS33AQ96AX1 RNU6-1170P-201ENST00000515974 106 ntBASIC1.08□□□□□ -2.24
VPS33AQ96AX1 AC090142.3-201ENST00000519012 385 ntBASIC1.08□□□□□ -2.24
VPS33AQ96AX1 AC040926.1-201ENST00000530195 238 ntBASIC1.08□□□□□ -2.24
VPS33AQ96AX1 AC087685.1-201ENST00000587507 141 ntBASIC1.08□□□□□ -2.24
VPS33AQ96AX1 AC006157.1-201ENST00000611750 366 ntBASIC1.08□□□□□ -2.24
VPS33AQ96AX1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
VPS33AQ96AX1 AL442644.1-201ENST00000454390 3105 ntBASIC1.07□□□□□ -2.24
VPS33AQ96AX1 MIR200A-201ENST00000384875 90 ntBASIC1.07□□□□□ -2.24
VPS33AQ96AX1 AL590004.1-201ENST00000405321 300 ntBASIC1.07□□□□□ -2.24
VPS33AQ96AX1 MIR1302-11-201ENST00000408051 138 ntBASIC1.07□□□□□ -2.24
VPS33AQ96AX1 MIR1302-9-201ENST00000408365 138 ntBASIC1.07□□□□□ -2.24
VPS33AQ96AX1 MIR1302-10-201ENST00000408734 138 ntBASIC1.07□□□□□ -2.24
VPS33AQ96AX1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.07□□□□□ -2.24
VPS33AQ96AX1 AC009474.2-201ENST00000451383 136 ntBASIC1.07□□□□□ -2.24
VPS33AQ96AX1 RNU7-21P-201ENST00000459430 62 ntBASIC1.07□□□□□ -2.24
VPS33AQ96AX1 RPS26P48-201ENST00000491713 339 ntBASIC1.07□□□□□ -2.24
VPS33AQ96AX1 UBL5P1-201ENST00000507979 193 ntBASIC1.07□□□□□ -2.24
VPS33AQ96AX1 AC127455.1-201ENST00000565496 145 ntBASIC1.07□□□□□ -2.24
VPS33AQ96AX1 MIR4661-201ENST00000582720 75 ntBASIC1.07□□□□□ -2.24
VPS33AQ96AX1 AL080274.1-201ENST00000605565 220 ntBASIC1.07□□□□□ -2.24
VPS33AQ96AX1 MIR1302-2-201ENST00000607096 138 ntBASIC1.07□□□□□ -2.24
VPS33AQ96AX1 Y_RNA.203-201ENST00000364106 102 ntBASIC1.06□□□□□ -2.24
VPS33AQ96AX1 SNORD50B-201ENST00000364995 70 ntBASIC1.06□□□□□ -2.24
VPS33AQ96AX1 SNORD14.1-201ENST00000365609 90 ntBASIC1.06□□□□□ -2.24
VPS33AQ96AX1 Y_RNA.395-201ENST00000383945 109 ntBASIC1.06□□□□□ -2.24
VPS33AQ96AX1 Y_RNA.431-201ENST00000384086 102 ntBASIC1.06□□□□□ -2.24
VPS33AQ96AX1 Y_RNA.471-201ENST00000384312 102 ntBASIC1.06□□□□□ -2.24
VPS33AQ96AX1 RNU6-937P-201ENST00000384325 106 ntBASIC1.06□□□□□ -2.24
VPS33AQ96AX1 MIR516B2-201ENST00000385190 85 ntBASIC1.06□□□□□ -2.24
VPS33AQ96AX1 AC022028.1-201ENST00000412054 408 ntBASIC1.06□□□□□ -2.24
VPS33AQ96AX1 RNU7-115P-201ENST00000516433 55 ntBASIC1.06□□□□□ -2.24
VPS33AQ96AX1 RNU7-43P-201ENST00000516554 64 ntBASIC1.06□□□□□ -2.24
VPS33AQ96AX1 AC024405.2-202ENST00000532731 184 ntBASIC1.06□□□□□ -2.24
VPS33AQ96AX1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.06□□□□□ -2.24
VPS33AQ96AX1 MIR3192-201ENST00000584920 77 ntBASIC1.06□□□□□ -2.24
VPS33AQ96AX1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
VPS33AQ96AX1 Y_RNA.80-201ENST00000362996 102 ntBASIC1.05□□□□□ -2.24
VPS33AQ96AX1 SNORA7.1-201ENST00000363750 139 ntBASIC1.05□□□□□ -2.24
VPS33AQ96AX1 SNORD114-24-201ENST00000365029 72 ntBASIC1.05□□□□□ -2.24
VPS33AQ96AX1 RNU6-969P-201ENST00000383900 105 ntBASIC1.05□□□□□ -2.24
VPS33AQ96AX1 Y_RNA.485-201ENST00000384395 102 ntBASIC1.05□□□□□ -2.24
VPS33AQ96AX1 RNU6-1248P-201ENST00000391096 64 ntBASIC1.05□□□□□ -2.24
VPS33AQ96AX1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.05□□□□□ -2.24
VPS33AQ96AX1 RNU7-90P-201ENST00000459216 62 ntBASIC1.05□□□□□ -2.24
VPS33AQ96AX1 AC108210.2-201ENST00000503681 201 ntBASIC1.05□□□□□ -2.24
VPS33AQ96AX1 SEPT14P8-201ENST00000508026 178 ntBASIC1.05□□□□□ -2.24
VPS33AQ96AX1 AP001094.1-201ENST00000579805 193 ntBASIC1.05□□□□□ -2.24
VPS33AQ96AX1 MIR4295-201ENST00000585286 85 ntBASIC1.05□□□□□ -2.24
VPS33AQ96AX1 SNORD113-5-201ENST00000607261 78 ntBASIC1.05□□□□□ -2.24
VPS33AQ96AX1 JPX_2.1-201ENST00000614161 69 ntBASIC1.05□□□□□ -2.24
VPS33AQ96AX1 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 202.2 ms