Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 MIR4771-2-201ENST00000577758 74 ntBASIC0.02□□□□□ -2.41
RPA3P35244 MIR4771-1-201ENST00000582617 74 ntBASIC0.02□□□□□ -2.41
RPA3P35244 AC005730.3-201ENST00000583067 366 ntBASIC0.02□□□□□ -2.41
RPA3P35244 AL162413.1-201ENST00000603198 110 ntBASIC0.02□□□□□ -2.41
RPA3P35244 LARP7P1-201ENST00000605576 316 ntBASIC0.02□□□□□ -2.41
RPA3P35244 Y_RNA.172-201ENST00000363765 102 ntBASIC0.01□□□□□ -2.41
RPA3P35244 RNU6-580P-201ENST00000365159 107 ntBASIC0.01□□□□□ -2.41
RPA3P35244 Y_RNA.370-201ENST00000365589 108 ntBASIC0.01□□□□□ -2.41
RPA3P35244 RNU6-205P-201ENST00000390858 107 ntBASIC0.01□□□□□ -2.41
RPA3P35244 SNORD71-201ENST00000411292 86 ntBASIC0.01□□□□□ -2.41
RPA3P35244 MTCO2P27-201ENST00000420740 428 ntBASIC0.01□□□□□ -2.41
RPA3P35244 AL358176.2-201ENST00000425769 204 ntBASIC0.01□□□□□ -2.41
RPA3P35244 AL353997.1-201ENST00000432936 108 ntBASIC0.01□□□□□ -2.41
RPA3P35244 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.01□□□□□ -2.41
RPA3P35244 Y_RNA.717-201ENST00000517106 92 ntBASIC0.01□□□□□ -2.41
RPA3P35244 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.01□□□□□ -2.41
RPA3P35244 AP003327.1-201ENST00000529684 127 ntBASIC0.01□□□□□ -2.41
RPA3P35244 MIR5701-3-201ENST00000578890 82 ntBASIC0.01□□□□□ -2.41
RPA3P35244 MIR4804-201ENST00000581683 73 ntBASIC0.01□□□□□ -2.41
RPA3P35244 MIR5701-1-201ENST00000585138 82 ntBASIC0.01□□□□□ -2.41
RPA3P35244 SNORA25.18-201ENST00000607153 114 ntBASIC0.01□□□□□ -2.41
RPA3P35244 MIR5701-2-201ENST00000615634 82 ntBASIC0.01□□□□□ -2.41
RPA3P35244 RNU6-815P-201ENST00000384080 113 ntBASIC0□□□□□ -2.41
RPA3P35244 RNU6-318P-201ENST00000384283 103 ntBASIC0□□□□□ -2.41
RPA3P35244 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0□□□□□ -2.41
RPA3P35244 AC073261.1-201ENST00000429409 121 ntBASIC0□□□□□ -2.41
RPA3P35244 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0□□□□□ -2.41
RPA3P35244 RNU2-12P-201ENST00000517216 168 ntBASIC0□□□□□ -2.41
RPA3P35244 AC022616.4-201ENST00000522985 181 ntBASIC0□□□□□ -2.41
RPA3P35244 AC078938.1-201ENST00000620993 318 ntBASIC0□□□□□ -2.41
RPA3P35244 AL391262.2-201ENST00000622466 494 ntBASIC0□□□□□ -2.41
RPA3P35244 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0□□□□□ -2.41
RPA3P35244 RNU6-451P-201ENST00000362921 107 ntBASIC-0.01□□□□□ -2.41
RPA3P35244 RNU6-259P-201ENST00000383999 107 ntBASIC-0.01□□□□□ -2.41
RPA3P35244 RNU6-1119P-201ENST00000384349 108 ntBASIC-0.01□□□□□ -2.41
RPA3P35244 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.01□□□□□ -2.41
RPA3P35244 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.01□□□□□ -2.41
RPA3P35244 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-0.01□□□□□ -2.41
RPA3P35244 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.01□□□□□ -2.41
RPA3P35244 RNA5SP480-201ENST00000516840 109 ntBASIC-0.01□□□□□ -2.41
RPA3P35244 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.01□□□□□ -2.41
RPA3P35244 MIR8087-201ENST00000612745 78 ntBASIC-0.01□□□□□ -2.41
RPA3P35244 MIR377-201ENST00000362145 69 ntBASIC-0.02□□□□□ -2.41
RPA3P35244 SNORD114-26-201ENST00000363543 72 ntBASIC-0.02□□□□□ -2.41
RPA3P35244 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.02□□□□□ -2.41
RPA3P35244 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.02□□□□□ -2.41
RPA3P35244 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.02□□□□□ -2.41
RPA3P35244 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.02□□□□□ -2.41
RPA3P35244 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.02□□□□□ -2.41
RPA3P35244 AC019235.1-201ENST00000503847 207 ntBASIC-0.02□□□□□ -2.41
RPA3P35244 RNU4-77P-201ENST00000516692 156 ntBASIC-0.02□□□□□ -2.41
RPA3P35244 RNA5SP94-201ENST00000516917 108 ntBASIC-0.02□□□□□ -2.41
RPA3P35244 RNU1-54P-201ENST00000517181 120 ntBASIC-0.02□□□□□ -2.41
RPA3P35244 AC069113.3-201ENST00000521019 150 ntBASIC-0.02□□□□□ -2.41
RPA3P35244 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
RPA3P35244 MIR4676-201ENST00000583078 72 ntBASIC-0.02□□□□□ -2.41
RPA3P35244 RAC1P9-201ENST00000604990 392 ntBASIC-0.02□□□□□ -2.41
RPA3P35244 AC020891.4-201ENST00000605745 93 ntBASIC-0.02□□□□□ -2.41
RPA3P35244 AC005014.2-201ENST00000607795 599 ntBASIC-0.02□□□□□ -2.41
RPA3P35244 MIR6128-201ENST00000615528 109 ntBASIC-0.02□□□□□ -2.41
RPA3P35244 AC004467.1-201ENST00000615678 330 ntBASIC-0.02□□□□□ -2.41
RPA3P35244 MIR4315-1-201ENST00000636800 73 ntBASIC-0.02□□□□□ -2.41
RPA3P35244 MIR4315-2-201ENST00000640925 73 ntBASIC-0.02□□□□□ -2.41
RPA3P35244 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.03□□□□□ -2.41
RPA3P35244 SNORA51.10-201ENST00000384418 136 ntBASIC-0.03□□□□□ -2.41
RPA3P35244 MT-TN-201ENST00000387400 73 ntBASIC-0.03□□□□□ -2.41
RPA3P35244 RNU6-700P-201ENST00000391043 107 ntBASIC-0.03□□□□□ -2.41
RPA3P35244 MTCO2P33-201ENST00000402100 465 ntBASIC-0.03□□□□□ -2.41
RPA3P35244 AL031003.1-201ENST00000404229 172 ntBASIC-0.03□□□□□ -2.41
RPA3P35244 RNU7-56P-201ENST00000458744 62 ntBASIC-0.03□□□□□ -2.41
RPA3P35244 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-0.03□□□□□ -2.41
RPA3P35244 NBR2-204ENST00000587322 63 ntBASIC-0.03□□□□□ -2.41
RPA3P35244 AC005972.2-201ENST00000604690 348 ntBASIC-0.03□□□□□ -2.41
RPA3P35244 MTND1P7-201ENST00000632801 297 ntBASIC-0.03□□□□□ -2.41
RPA3P35244 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.04□□□□□ -2.42
RPA3P35244 Y_RNA.77-201ENST00000362962 107 ntBASIC-0.04□□□□□ -2.42
RPA3P35244 SNORD14E-201ENST00000364009 85 ntBASIC-0.04□□□□□ -2.42
RPA3P35244 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.04□□□□□ -2.42
RPA3P35244 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.04□□□□□ -2.42
RPA3P35244 RNU6-1042P-201ENST00000384204 107 ntBASIC-0.04□□□□□ -2.42
RPA3P35244 SNORD38C-201ENST00000384381 69 ntBASIC-0.04□□□□□ -2.42
RPA3P35244 SNORD12B-201ENST00000410433 91 ntBASIC-0.04□□□□□ -2.42
RPA3P35244 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.04□□□□□ -2.42
RPA3P35244 MTND2P9-201ENST00000422293 931 ntBASIC-0.04□□□□□ -2.42
RPA3P35244 HMGN1P10-201ENST00000474557 553 ntBASIC-0.04□□□□□ -2.42
RPA3P35244 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.04□□□□□ -2.42
RPA3P35244 AC093534.1-201ENST00000504977 132 ntBASIC-0.04□□□□□ -2.42
RPA3P35244 RNU6-408P-201ENST00000515910 100 ntBASIC-0.04□□□□□ -2.42
RPA3P35244 RNU6-1088P-201ENST00000516850 104 ntBASIC-0.04□□□□□ -2.42
RPA3P35244 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.04□□□□□ -2.42
RPA3P35244 AC105029.1-201ENST00000520250 669 ntBASIC-0.04□□□□□ -2.42
RPA3P35244 AC055872.1-201ENST00000570978 278 ntBASIC-0.04□□□□□ -2.42
RPA3P35244 EIF1P4-201ENST00000572664 335 ntBASIC-0.04□□□□□ -2.42
RPA3P35244 MIR3611-201ENST00000584484 83 ntBASIC-0.04□□□□□ -2.42
RPA3P35244 AP000753.3-201ENST00000604083 169 ntBASIC-0.04□□□□□ -2.42
RPA3P35244 SNORD118-201ENST00000363593 134 ntBASIC-0.05□□□□□ -2.42
RPA3P35244 RNY3P3-201ENST00000363816 102 ntBASIC-0.05□□□□□ -2.42
RPA3P35244 RNU6-125P-201ENST00000384505 107 ntBASIC-0.05□□□□□ -2.42
RPA3P35244 RNU2-66P-201ENST00000410650 161 ntBASIC-0.05□□□□□ -2.42
RPA3P35244 AL139396.1-201ENST00000421137 167 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms