Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 SEPT7P4-201ENST00000437076 306 ntBASIC-0.16□□□□□ -2.44
HLA-DMBP28068 AC087499.7-201ENST00000441958 109 ntBASIC-0.16□□□□□ -2.44
HLA-DMBP28068 U8.19-201ENST00000459095 133 ntBASIC-0.16□□□□□ -2.44
HLA-DMBP28068 U8.22-201ENST00000459141 133 ntBASIC-0.16□□□□□ -2.44
HLA-DMBP28068 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.16□□□□□ -2.44
HLA-DMBP28068 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.16□□□□□ -2.44
HLA-DMBP28068 RNU6-830P-201ENST00000516353 107 ntBASIC-0.16□□□□□ -2.44
HLA-DMBP28068 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.16□□□□□ -2.44
HLA-DMBP28068 AC090897.1-201ENST00000580909 226 ntBASIC-0.16□□□□□ -2.44
HLA-DMBP28068 MIR4264-201ENST00000583520 66 ntBASIC-0.16□□□□□ -2.44
HLA-DMBP28068 AP000753.3-201ENST00000604083 169 ntBASIC-0.16□□□□□ -2.44
HLA-DMBP28068 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.17□□□□□ -2.44
HLA-DMBP28068 RNU6-302P-201ENST00000365249 107 ntBASIC-0.17□□□□□ -2.44
HLA-DMBP28068 SNORA75-201ENST00000384158 137 ntBASIC-0.17□□□□□ -2.44
HLA-DMBP28068 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.17□□□□□ -2.44
HLA-DMBP28068 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.17□□□□□ -2.44
HLA-DMBP28068 RNU6-205P-201ENST00000390858 107 ntBASIC-0.17□□□□□ -2.44
HLA-DMBP28068 RNU6-131P-201ENST00000391144 107 ntBASIC-0.17□□□□□ -2.44
HLA-DMBP28068 RNA5SP475-201ENST00000410568 110 ntBASIC-0.17□□□□□ -2.44
HLA-DMBP28068 MLLT10P1-201ENST00000418346 262 ntBASIC-0.17□□□□□ -2.44
HLA-DMBP28068 AC092447.3-201ENST00000426027 686 ntBASIC-0.17□□□□□ -2.44
HLA-DMBP28068 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.17□□□□□ -2.44
HLA-DMBP28068 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.17□□□□□ -2.44
HLA-DMBP28068 MIR6759-201ENST00000638110 65 ntBASIC-0.17□□□□□ -2.44
HLA-DMBP28068 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.17□□□□□ -2.44
HLA-DMBP28068 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.18□□□□□ -2.44
HLA-DMBP28068 SNORD115-30-201ENST00000364117 82 ntBASIC-0.18□□□□□ -2.44
HLA-DMBP28068 SNORA51.10-201ENST00000384418 136 ntBASIC-0.18□□□□□ -2.44
HLA-DMBP28068 MIR938-201ENST00000401216 83 ntBASIC-0.18□□□□□ -2.44
HLA-DMBP28068 RNU2-59P-201ENST00000410482 191 ntBASIC-0.18□□□□□ -2.44
HLA-DMBP28068 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.18□□□□□ -2.44
HLA-DMBP28068 SNRPGP10-201ENST00000432323 225 ntBASIC-0.18□□□□□ -2.44
HLA-DMBP28068 AL353997.1-201ENST00000432936 108 ntBASIC-0.18□□□□□ -2.44
HLA-DMBP28068 RNU6-625P-201ENST00000459412 107 ntBASIC-0.18□□□□□ -2.44
HLA-DMBP28068 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.18□□□□□ -2.44
HLA-DMBP28068 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.18□□□□□ -2.44
HLA-DMBP28068 AC141557.1-201ENST00000540982 400 ntBASIC-0.18□□□□□ -2.44
HLA-DMBP28068 ZNF519P2-201ENST00000557032 169 ntBASIC-0.18□□□□□ -2.44
HLA-DMBP28068 AC010525.2-201ENST00000590920 195 ntBASIC-0.18□□□□□ -2.44
HLA-DMBP28068 AC090517.2-201ENST00000614966 680 ntBASIC-0.18□□□□□ -2.44
HLA-DMBP28068 Z69908.1-201ENST00000622603 247 ntBASIC-0.18□□□□□ -2.44
HLA-DMBP28068 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.18□□□□□ -2.44
HLA-DMBP28068 SNORD114-5-201ENST00000362928 70 ntBASIC-0.19□□□□□ -2.44
HLA-DMBP28068 SNORD38C-201ENST00000384381 69 ntBASIC-0.19□□□□□ -2.44
HLA-DMBP28068 RNU6-125P-201ENST00000384505 107 ntBASIC-0.19□□□□□ -2.44
HLA-DMBP28068 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.19□□□□□ -2.44
HLA-DMBP28068 MIR570-201ENST00000384917 97 ntBASIC-0.19□□□□□ -2.44
HLA-DMBP28068 BTF3P11-201ENST00000426582 477 ntBASIC-0.19□□□□□ -2.44
HLA-DMBP28068 RNU7-66P-201ENST00000459469 62 ntBASIC-0.19□□□□□ -2.44
HLA-DMBP28068 MTND3P7-201ENST00000474435 343 ntBASIC-0.19□□□□□ -2.44
HLA-DMBP28068 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.19□□□□□ -2.44
HLA-DMBP28068 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-0.19□□□□□ -2.44
HLA-DMBP28068 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.19□□□□□ -2.44
HLA-DMBP28068 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.19□□□□□ -2.44
HLA-DMBP28068 MIR3678-201ENST00000578455 94 ntBASIC-0.19□□□□□ -2.44
HLA-DMBP28068 MTND1P7-201ENST00000632801 297 ntBASIC-0.19□□□□□ -2.44
HLA-DMBP28068 AC068137.3-201ENST00000639191 341 ntBASIC-0.19□□□□□ -2.44
HLA-DMBP28068 SNORA32.1-201ENST00000364514 115 ntBASIC-0.2□□□□□ -2.44
HLA-DMBP28068 RNA5SP496-201ENST00000391240 109 ntBASIC-0.2□□□□□ -2.44
HLA-DMBP28068 MTCO2P27-201ENST00000420740 428 ntBASIC-0.2□□□□□ -2.44
HLA-DMBP28068 RNU6-256P-201ENST00000516747 97 ntBASIC-0.2□□□□□ -2.44
HLA-DMBP28068 RNU2-12P-201ENST00000517216 168 ntBASIC-0.2□□□□□ -2.44
HLA-DMBP28068 AL158211.1-201ENST00000566763 763 ntBASIC-0.2□□□□□ -2.44
HLA-DMBP28068 MIR4273-201ENST00000582824 84 ntBASIC-0.2□□□□□ -2.44
HLA-DMBP28068 AC093424.1-201ENST00000604999 338 ntBASIC-0.2□□□□□ -2.44
HLA-DMBP28068 AC240442.1-201ENST00000616055 283 ntBASIC-0.2□□□□□ -2.44
HLA-DMBP28068 uc_338.4-201ENST00000616635 176 ntBASIC-0.2□□□□□ -2.44
HLA-DMBP28068 SNORA9.1-201ENST00000362412 131 ntBASIC-0.21□□□□□ -2.44
HLA-DMBP28068 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.21□□□□□ -2.44
HLA-DMBP28068 U8.17-201ENST00000391292 132 ntBASIC-0.21□□□□□ -2.44
HLA-DMBP28068 MTCO2P33-201ENST00000402100 465 ntBASIC-0.21□□□□□ -2.44
HLA-DMBP28068 SNRPGP14-201ENST00000435400 219 ntBASIC-0.21□□□□□ -2.44
HLA-DMBP28068 RN7SKP298-201ENST00000515950 94 ntBASIC-0.21□□□□□ -2.44
HLA-DMBP28068 LRRC34P1-201ENST00000542742 915 ntBASIC-0.21□□□□□ -2.44
HLA-DMBP28068 RPL23AP91-201ENST00000569211 455 ntBASIC-0.21□□□□□ -2.44
HLA-DMBP28068 MIR5701-3-201ENST00000578890 82 ntBASIC-0.21□□□□□ -2.44
HLA-DMBP28068 MIR3672-201ENST00000584290 82 ntBASIC-0.21□□□□□ -2.44
HLA-DMBP28068 MIR5701-1-201ENST00000585138 82 ntBASIC-0.21□□□□□ -2.44
HLA-DMBP28068 AC008608.1-201ENST00000603910 127 ntBASIC-0.21□□□□□ -2.44
HLA-DMBP28068 MIR4791-201ENST00000607666 84 ntBASIC-0.21□□□□□ -2.44
HLA-DMBP28068 MIR5701-2-201ENST00000615634 82 ntBASIC-0.21□□□□□ -2.44
HLA-DMBP28068 Pinc.1-201ENST00000616452 154 ntBASIC-0.21□□□□□ -2.44
HLA-DMBP28068 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.22□□□□□ -2.44
HLA-DMBP28068 RNY1P16-201ENST00000363063 111 ntBASIC-0.22□□□□□ -2.44
HLA-DMBP28068 SNORA36.1-201ENST00000363424 132 ntBASIC-0.22□□□□□ -2.44
HLA-DMBP28068 SNORD14E-201ENST00000364009 85 ntBASIC-0.22□□□□□ -2.44
HLA-DMBP28068 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.22□□□□□ -2.44
HLA-DMBP28068 U8.7-201ENST00000364940 136 ntBASIC-0.22□□□□□ -2.44
HLA-DMBP28068 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.22□□□□□ -2.44
HLA-DMBP28068 RNU6-514P-201ENST00000384208 107 ntBASIC-0.22□□□□□ -2.44
HLA-DMBP28068 SNORA72-201ENST00000384339 132 ntBASIC-0.22□□□□□ -2.44
HLA-DMBP28068 Y_RNA.530-201ENST00000384587 101 ntBASIC-0.22□□□□□ -2.44
HLA-DMBP28068 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.22□□□□□ -2.44
HLA-DMBP28068 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.22□□□□□ -2.44
HLA-DMBP28068 MIR190B-201ENST00000401119 79 ntBASIC-0.22□□□□□ -2.44
HLA-DMBP28068 RNU6-1068P-201ENST00000410958 103 ntBASIC-0.22□□□□□ -2.44
HLA-DMBP28068 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.22□□□□□ -2.44
HLA-DMBP28068 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.22□□□□□ -2.44
HLA-DMBP28068 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.22□□□□□ -2.44
HLA-DMBP28068 RPL17P19-201ENST00000489069 552 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms