Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MIR1295B-201ENST00000636144 60 ntBASIC-0.38□□□□□ -2.47
APOEP02649 MIR3674-201ENST00000636576 68 ntBASIC-0.38□□□□□ -2.47
APOEP02649 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.39□□□□□ -2.47
APOEP02649 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.39□□□□□ -2.47
APOEP02649 RNU6-522P-201ENST00000364497 107 ntBASIC-0.39□□□□□ -2.47
APOEP02649 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.39□□□□□ -2.47
APOEP02649 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.39□□□□□ -2.47
APOEP02649 MIR514A2-201ENST00000385131 88 ntBASIC-0.39□□□□□ -2.47
APOEP02649 MIR514A3-201ENST00000385132 88 ntBASIC-0.39□□□□□ -2.47
APOEP02649 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.39□□□□□ -2.47
APOEP02649 RNA5SP475-201ENST00000410568 110 ntBASIC-0.39□□□□□ -2.47
APOEP02649 RNU7-62P-201ENST00000458856 62 ntBASIC-0.39□□□□□ -2.47
APOEP02649 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.39□□□□□ -2.47
APOEP02649 AC116353.2-201ENST00000505332 712 ntBASIC-0.39□□□□□ -2.47
APOEP02649 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.39□□□□□ -2.47
APOEP02649 RNU7-129P-201ENST00000516128 62 ntBASIC-0.39□□□□□ -2.47
APOEP02649 MIR4791-201ENST00000607666 84 ntBASIC-0.39□□□□□ -2.47
APOEP02649 AC092954.2-201ENST00000609103 430 ntBASIC-0.39□□□□□ -2.47
APOEP02649 uc_338.4-201ENST00000616635 176 ntBASIC-0.39□□□□□ -2.47
APOEP02649 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.39□□□□□ -2.47
APOEP02649 U8.7-201ENST00000364940 136 ntBASIC-0.4□□□□□ -2.47
APOEP02649 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.4□□□□□ -2.47
APOEP02649 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.4□□□□□ -2.47
APOEP02649 RNU6-929P-201ENST00000384429 107 ntBASIC-0.4□□□□□ -2.47
APOEP02649 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.4□□□□□ -2.47
APOEP02649 RNU6-747P-201ENST00000390928 104 ntBASIC-0.4□□□□□ -2.47
APOEP02649 RNU6-241P-201ENST00000391148 104 ntBASIC-0.4□□□□□ -2.47
APOEP02649 U8.17-201ENST00000391292 132 ntBASIC-0.4□□□□□ -2.47
APOEP02649 RNU6-447P-201ENST00000410293 104 ntBASIC-0.4□□□□□ -2.47
APOEP02649 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.4□□□□□ -2.47
APOEP02649 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.4□□□□□ -2.47
APOEP02649 RNU6-355P-201ENST00000410427 104 ntBASIC-0.4□□□□□ -2.47
APOEP02649 RNU6-791P-201ENST00000410467 104 ntBASIC-0.4□□□□□ -2.47
APOEP02649 RNU6-705P-201ENST00000410601 104 ntBASIC-0.4□□□□□ -2.47
APOEP02649 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.4□□□□□ -2.47
APOEP02649 RNU6-860P-201ENST00000410860 104 ntBASIC-0.4□□□□□ -2.47
APOEP02649 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.4□□□□□ -2.47
APOEP02649 RNU6-785P-201ENST00000411324 104 ntBASIC-0.4□□□□□ -2.47
APOEP02649 AC090844.1-201ENST00000422019 156 ntBASIC-0.4□□□□□ -2.47
APOEP02649 USMG5P1-201ENST00000425964 177 ntBASIC-0.4□□□□□ -2.47
APOEP02649 EIF1P2-201ENST00000428233 350 ntBASIC-0.4□□□□□ -2.47
APOEP02649 MTND2P39-201ENST00000457230 764 ntBASIC-0.4□□□□□ -2.47
APOEP02649 SNORA18.4-201ENST00000516440 124 ntBASIC-0.4□□□□□ -2.47
APOEP02649 MIR4528-201ENST00000577763 90 ntBASIC-0.4□□□□□ -2.47
APOEP02649 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.4□□□□□ -2.47
APOEP02649 AC019193.3-201ENST00000609144 554 ntBASIC-0.4□□□□□ -2.47
APOEP02649 U6.90-201ENST00000614007 104 ntBASIC-0.4□□□□□ -2.47
APOEP02649 U6.70-201ENST00000620287 104 ntBASIC-0.4□□□□□ -2.47
APOEP02649 AC097520.1-201ENST00000624435 385 ntBASIC-0.4□□□□□ -2.47
APOEP02649 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.41□□□□□ -2.48
APOEP02649 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.41□□□□□ -2.48
APOEP02649 SNORD38C-201ENST00000384381 69 ntBASIC-0.41□□□□□ -2.48
APOEP02649 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.41□□□□□ -2.48
APOEP02649 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.41□□□□□ -2.48
APOEP02649 RNU6-625P-201ENST00000459412 107 ntBASIC-0.41□□□□□ -2.48
APOEP02649 RPL17P19-201ENST00000489069 552 ntBASIC-0.41□□□□□ -2.48
APOEP02649 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.41□□□□□ -2.48
APOEP02649 RNU7-181P-201ENST00000517234 74 ntBASIC-0.41□□□□□ -2.48
APOEP02649 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.41□□□□□ -2.48
APOEP02649 AC240442.1-201ENST00000616055 283 ntBASIC-0.41□□□□□ -2.48
APOEP02649 Pinc.1-201ENST00000616452 154 ntBASIC-0.41□□□□□ -2.48
APOEP02649 SNORD14E-201ENST00000364009 85 ntBASIC-0.42□□□□□ -2.48
APOEP02649 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.42□□□□□ -2.48
APOEP02649 SNORA69-201ENST00000383895 132 ntBASIC-0.42□□□□□ -2.48
APOEP02649 MIR125B2-201ENST00000385128 89 ntBASIC-0.42□□□□□ -2.48
APOEP02649 MIR214-201ENST00000385214 110 ntBASIC-0.42□□□□□ -2.48
APOEP02649 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.42□□□□□ -2.48
APOEP02649 RNA5SP285-201ENST00000516619 119 ntBASIC-0.42□□□□□ -2.48
APOEP02649 RNA5SP268-201ENST00000516828 124 ntBASIC-0.42□□□□□ -2.48
APOEP02649 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.42□□□□□ -2.48
APOEP02649 AC124303.1-201ENST00000605703 360 ntBASIC-0.42□□□□□ -2.48
APOEP02649 AC010332.2-201ENST00000613083 1904 ntBASIC-0.42□□□□□ -2.48
APOEP02649 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.43□□□□□ -2.48
APOEP02649 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.43□□□□□ -2.48
APOEP02649 RNA5SP128-201ENST00000365305 116 ntBASIC-0.43□□□□□ -2.48
APOEP02649 AL365203.2-201ENST00000423444 196 ntBASIC-0.43□□□□□ -2.48
APOEP02649 AC005042.3-201ENST00000453230 174 ntBASIC-0.43□□□□□ -2.48
APOEP02649 AC091959.1-201ENST00000495857 238 ntBASIC-0.43□□□□□ -2.48
APOEP02649 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.43□□□□□ -2.48
APOEP02649 SCARNA1-201ENST00000517138 166 ntBASIC-0.43□□□□□ -2.48
APOEP02649 RNU7-156P-201ENST00000517214 74 ntBASIC-0.43□□□□□ -2.48
APOEP02649 MTATP6P24-201ENST00000576835 677 ntBASIC-0.43□□□□□ -2.48
APOEP02649 MIR4743-201ENST00000584576 69 ntBASIC-0.43□□□□□ -2.48
APOEP02649 AC245884.10-201ENST00000597355 337 ntBASIC-0.43□□□□□ -2.48
APOEP02649 AC005972.2-201ENST00000604690 348 ntBASIC-0.43□□□□□ -2.48
APOEP02649 RNY1P16-201ENST00000363063 111 ntBASIC-0.44□□□□□ -2.48
APOEP02649 RNU6-595P-201ENST00000363944 107 ntBASIC-0.44□□□□□ -2.48
APOEP02649 RNU6-756P-201ENST00000383997 107 ntBASIC-0.44□□□□□ -2.48
APOEP02649 RNU6-187P-201ENST00000384139 106 ntBASIC-0.44□□□□□ -2.48
APOEP02649 MIR548H2-201ENST00000408874 88 ntBASIC-0.44□□□□□ -2.48
APOEP02649 RNU6-830P-201ENST00000516353 107 ntBASIC-0.44□□□□□ -2.48
APOEP02649 AC022616.4-201ENST00000522985 181 ntBASIC-0.44□□□□□ -2.48
APOEP02649 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.44□□□□□ -2.48
APOEP02649 SNORD92-201ENST00000585078 85 ntBASIC-0.44□□□□□ -2.48
APOEP02649 RNU6-89P-201ENST00000606519 100 ntBASIC-0.44□□□□□ -2.48
APOEP02649 MIR7107-201ENST00000611489 80 ntBASIC-0.44□□□□□ -2.48
APOEP02649 SNORD115-30-201ENST00000364117 82 ntBASIC-0.45□□□□□ -2.48
APOEP02649 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.45□□□□□ -2.48
APOEP02649 AC083798.1-201ENST00000472671 131 ntBASIC-0.45□□□□□ -2.48
APOEP02649 RNU6-448P-201ENST00000517052 107 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms