Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 SEPT14P17-201ENST00000617978 177 ntBASIC0.75□□□□□ -2.29
MBD3O95983 Y_RNA.796-201ENST00000364268 102 ntBASIC0.74□□□□□ -2.29
MBD3O95983 Y_RNA.799-201ENST00000364992 102 ntBASIC0.74□□□□□ -2.29
MBD3O95983 SNORA72-201ENST00000384339 132 ntBASIC0.74□□□□□ -2.29
MBD3O95983 RNU6-310P-201ENST00000384655 107 ntBASIC0.74□□□□□ -2.29
MBD3O95983 MIR605-201ENST00000385078 83 ntBASIC0.74□□□□□ -2.29
MBD3O95983 Y_RNA.646-201ENST00000410980 101 ntBASIC0.74□□□□□ -2.29
MBD3O95983 Y_RNA.621-201ENST00000411065 96 ntBASIC0.74□□□□□ -2.29
MBD3O95983 HMGN2P32-201ENST00000444648 269 ntBASIC0.74□□□□□ -2.29
MBD3O95983 CHEK2P4-201ENST00000450340 246 ntBASIC0.74□□□□□ -2.29
MBD3O95983 SNORA25.10-201ENST00000515926 124 ntBASIC0.74□□□□□ -2.29
MBD3O95983 RNU6-436P-201ENST00000516171 114 ntBASIC0.74□□□□□ -2.29
MBD3O95983 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.74□□□□□ -2.29
MBD3O95983 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
MBD3O95983 RNU6-626P-201ENST00000363354 107 ntBASIC0.73□□□□□ -2.29
MBD3O95983 Y_RNA.253-201ENST00000364562 112 ntBASIC0.73□□□□□ -2.29
MBD3O95983 Y_RNA.446-201ENST00000384178 104 ntBASIC0.73□□□□□ -2.29
MBD3O95983 RNU6-710P-201ENST00000410424 105 ntBASIC0.73□□□□□ -2.29
MBD3O95983 PDCL2P1-201ENST00000419302 352 ntBASIC0.73□□□□□ -2.29
MBD3O95983 RPS20P10-201ENST00000451209 253 ntBASIC0.73□□□□□ -2.29
MBD3O95983 RNU6-470P-201ENST00000515954 104 ntBASIC0.73□□□□□ -2.29
MBD3O95983 SNORD45.4-201ENST00000516629 73 ntBASIC0.73□□□□□ -2.29
MBD3O95983 MIR151B-201ENST00000584249 96 ntBASIC0.73□□□□□ -2.29
MBD3O95983 TPTEP1-208ENST00000636884 213 ntBASIC0.73□□□□□ -2.29
MBD3O95983 Y_RNA.160-201ENST00000363677 92 ntBASIC0.72□□□□□ -2.29
MBD3O95983 RNA5SP48-201ENST00000363969 126 ntBASIC0.72□□□□□ -2.29
MBD3O95983 RNU6-20P-201ENST00000384106 107 ntBASIC0.72□□□□□ -2.29
MBD3O95983 RNU6-110P-201ENST00000384508 104 ntBASIC0.72□□□□□ -2.29
MBD3O95983 MIR520C-201ENST00000385005 87 ntBASIC0.72□□□□□ -2.29
MBD3O95983 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.72□□□□□ -2.29
MBD3O95983 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.72□□□□□ -2.29
MBD3O95983 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.72□□□□□ -2.29
MBD3O95983 U7.7-201ENST00000459276 60 ntBASIC0.72□□□□□ -2.29
MBD3O95983 RNU6-1213P-201ENST00000517075 94 ntBASIC0.72□□□□□ -2.29
MBD3O95983 AC025627.3-201ENST00000582078 182 ntBASIC0.72□□□□□ -2.29
MBD3O95983 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
MBD3O95983 AC022441.3-201ENST00000605737 136 ntBASIC0.72□□□□□ -2.29
MBD3O95983 U6atac.1-201ENST00000616025 117 ntBASIC0.72□□□□□ -2.29
MBD3O95983 AC007742.2-201ENST00000618226 398 ntBASIC0.72□□□□□ -2.29
MBD3O95983 AC023934.1-201ENST00000574529 2389 ntBASIC0.71□□□□□ -2.3
MBD3O95983 MIR96-201ENST00000362288 78 ntBASIC0.71□□□□□ -2.3
MBD3O95983 snoU2-30.1-201ENST00000365012 70 ntBASIC0.71□□□□□ -2.3
MBD3O95983 SNORD14.1-201ENST00000365609 90 ntBASIC0.71□□□□□ -2.3
MBD3O95983 RNU6-1323P-201ENST00000384025 107 ntBASIC0.71□□□□□ -2.3
MBD3O95983 RNY1P14-201ENST00000384426 108 ntBASIC0.71□□□□□ -2.3
MBD3O95983 MT-TL1-201ENST00000386347 75 ntBASIC0.71□□□□□ -2.3
MBD3O95983 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.71□□□□□ -2.3
MBD3O95983 RNU6-370P-201ENST00000411008 104 ntBASIC0.71□□□□□ -2.3
MBD3O95983 AC099799.1-201ENST00000439809 192 ntBASIC0.71□□□□□ -2.3
MBD3O95983 AC113410.1-201ENST00000505029 247 ntBASIC0.71□□□□□ -2.3
MBD3O95983 MIR4764-201ENST00000580680 88 ntBASIC0.71□□□□□ -2.3
MBD3O95983 AL353765.1-201ENST00000605514 183 ntBASIC0.71□□□□□ -2.3
MBD3O95983 AC133104.2-201ENST00000615272 193 ntBASIC0.71□□□□□ -2.3
MBD3O95983 MIR103A2-201ENST00000362154 78 ntBASIC0.7□□□□□ -2.3
MBD3O95983 RNU6-1084P-201ENST00000362498 107 ntBASIC0.7□□□□□ -2.3
MBD3O95983 Y_RNA.27-201ENST00000362540 103 ntBASIC0.7□□□□□ -2.3
MBD3O95983 SNORD81.2-201ENST00000365153 76 ntBASIC0.7□□□□□ -2.3
MBD3O95983 SNORD114-22-201ENST00000365423 72 ntBASIC0.7□□□□□ -2.3
MBD3O95983 MIR92A1-201ENST00000385233 78 ntBASIC0.7□□□□□ -2.3
MBD3O95983 MIR1185-1-201ENST00000408598 86 ntBASIC0.7□□□□□ -2.3
MBD3O95983 RPS26P5-201ENST00000418544 335 ntBASIC0.7□□□□□ -2.3
MBD3O95983 MTND1P2-201ENST00000430604 821 ntBASIC0.7□□□□□ -2.3
MBD3O95983 RNU7-116P-201ENST00000516940 62 ntBASIC0.7□□□□□ -2.3
MBD3O95983 AC092794.1-201ENST00000612734 582 ntBASIC0.7□□□□□ -2.3
MBD3O95983 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
MBD3O95983 RNU6-490P-201ENST00000362985 107 ntBASIC0.69□□□□□ -2.3
MBD3O95983 Y_RNA.146-201ENST00000363549 102 ntBASIC0.69□□□□□ -2.3
MBD3O95983 RNU6-926P-201ENST00000384075 107 ntBASIC0.69□□□□□ -2.3
MBD3O95983 RNU6-890P-201ENST00000384121 107 ntBASIC0.69□□□□□ -2.3
MBD3O95983 RNU6-131P-201ENST00000391144 107 ntBASIC0.69□□□□□ -2.3
MBD3O95983 Y_RNA.605-201ENST00000410577 105 ntBASIC0.69□□□□□ -2.3
MBD3O95983 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.69□□□□□ -2.3
MBD3O95983 AL390729.2-201ENST00000416137 156 ntBASIC0.69□□□□□ -2.3
MBD3O95983 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.69□□□□□ -2.3
MBD3O95983 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.69□□□□□ -2.3
MBD3O95983 RNU6-155P-201ENST00000516347 100 ntBASIC0.69□□□□□ -2.3
MBD3O95983 RNU6-1223P-201ENST00000517124 104 ntBASIC0.69□□□□□ -2.3
MBD3O95983 MTND4LP26-201ENST00000518144 282 ntBASIC0.69□□□□□ -2.3
MBD3O95983 MIR4659A-201ENST00000580269 81 ntBASIC0.69□□□□□ -2.3
MBD3O95983 AC131055.1-201ENST00000584626 316 ntBASIC0.69□□□□□ -2.3
MBD3O95983 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.69□□□□□ -2.3
MBD3O95983 AC087685.1-201ENST00000587507 141 ntBASIC0.69□□□□□ -2.3
MBD3O95983 AC113139.1-201ENST00000605049 239 ntBASIC0.69□□□□□ -2.3
MBD3O95983 U2.1-201ENST00000618978 145 ntBASIC0.69□□□□□ -2.3
MBD3O95983 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
MBD3O95983 AC139792.2-201ENST00000624218 587 ntBASIC0.69□□□□□ -2.3
MBD3O95983 AC138305.3-201ENST00000624988 240 ntBASIC0.69□□□□□ -2.3
MBD3O95983 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
MBD3O95983 MIR373-201ENST00000362273 69 ntBASIC0.68□□□□□ -2.3
MBD3O95983 Y_RNA.172-201ENST00000363765 102 ntBASIC0.68□□□□□ -2.3
MBD3O95983 Y_RNA.474-201ENST00000384341 102 ntBASIC0.68□□□□□ -2.3
MBD3O95983 MCFD2P1-201ENST00000417812 300 ntBASIC0.68□□□□□ -2.3
MBD3O95983 AL035398.1-201ENST00000430869 322 ntBASIC0.68□□□□□ -2.3
MBD3O95983 Y_RNA.653-201ENST00000459091 95 ntBASIC0.68□□□□□ -2.3
MBD3O95983 RNU6-120P-201ENST00000516077 103 ntBASIC0.68□□□□□ -2.3
MBD3O95983 RN7SKP164-201ENST00000516138 266 ntBASIC0.68□□□□□ -2.3
MBD3O95983 RNU6-1110P-201ENST00000516462 101 ntBASIC0.68□□□□□ -2.3
MBD3O95983 RN7SKP295-201ENST00000517264 153 ntBASIC0.68□□□□□ -2.3
MBD3O95983 AL590095.2-201ENST00000604136 117 ntBASIC0.68□□□□□ -2.3
MBD3O95983 AC010205.1-201ENST00000616668 449 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms