Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.83□□□□□ -2.28
NPIPA1Q9UND3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.83□□□□□ -2.28
NPIPA1Q9UND3 RNU7-169P-201ENST00000459456 61 ntBASIC0.83□□□□□ -2.28
NPIPA1Q9UND3 RPS26P48-201ENST00000491713 339 ntBASIC0.83□□□□□ -2.28
NPIPA1Q9UND3 CYCTP-201ENST00000504253 315 ntBASIC0.83□□□□□ -2.28
NPIPA1Q9UND3 AC114811.1-201ENST00000507207 168 ntBASIC0.83□□□□□ -2.28
NPIPA1Q9UND3 SNORD111.1-201ENST00000516421 86 ntBASIC0.83□□□□□ -2.28
NPIPA1Q9UND3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.83□□□□□ -2.28
NPIPA1Q9UND3 AC055872.1-201ENST00000570978 278 ntBASIC0.83□□□□□ -2.28
NPIPA1Q9UND3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
NPIPA1Q9UND3 AC006380.1-201ENST00000603598 186 ntBASIC0.83□□□□□ -2.28
NPIPA1Q9UND3 AC087588.2-201ENST00000617667 426 ntBASIC0.83□□□□□ -2.28
NPIPA1Q9UND3 SNORD115-30-201ENST00000364117 82 ntBASIC0.82□□□□□ -2.28
NPIPA1Q9UND3 MIR942-201ENST00000401111 86 ntBASIC0.82□□□□□ -2.28
NPIPA1Q9UND3 RNU6-370P-201ENST00000411008 104 ntBASIC0.82□□□□□ -2.28
NPIPA1Q9UND3 AL162725.1-201ENST00000435405 301 ntBASIC0.82□□□□□ -2.28
NPIPA1Q9UND3 PDCD5P2-201ENST00000507570 312 ntBASIC0.82□□□□□ -2.28
NPIPA1Q9UND3 RNU2-12P-201ENST00000517216 168 ntBASIC0.82□□□□□ -2.28
NPIPA1Q9UND3 CYP3A137P-201ENST00000562436 69 ntBASIC0.82□□□□□ -2.28
NPIPA1Q9UND3 AL008636.1-201ENST00000625038 1018 ntBASIC0.82□□□□□ -2.28
NPIPA1Q9UND3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
NPIPA1Q9UND3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
NPIPA1Q9UND3 SNORD114-7-201ENST00000362520 77 ntBASIC0.81□□□□□ -2.28
NPIPA1Q9UND3 RNU6-845P-201ENST00000362578 103 ntBASIC0.81□□□□□ -2.28
NPIPA1Q9UND3 Y_RNA.112-201ENST00000363250 102 ntBASIC0.81□□□□□ -2.28
NPIPA1Q9UND3 RNY3P11-201ENST00000364153 102 ntBASIC0.81□□□□□ -2.28
NPIPA1Q9UND3 RNU6-969P-201ENST00000383900 105 ntBASIC0.81□□□□□ -2.28
NPIPA1Q9UND3 RNU6-1105P-201ENST00000384774 107 ntBASIC0.81□□□□□ -2.28
NPIPA1Q9UND3 MIR598-201ENST00000384868 97 ntBASIC0.81□□□□□ -2.28
NPIPA1Q9UND3 Y_RNA.592-201ENST00000410274 109 ntBASIC0.81□□□□□ -2.28
NPIPA1Q9UND3 Y_RNA.646-201ENST00000410980 101 ntBASIC0.81□□□□□ -2.28
NPIPA1Q9UND3 MLLT10P1-201ENST00000418346 262 ntBASIC0.81□□□□□ -2.28
NPIPA1Q9UND3 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.81□□□□□ -2.28
NPIPA1Q9UND3 RPS20P10-201ENST00000451209 253 ntBASIC0.81□□□□□ -2.28
NPIPA1Q9UND3 FGF7P6-202ENST00000451282 293 ntBASIC0.81□□□□□ -2.28
NPIPA1Q9UND3 Y_RNA.635-201ENST00000459041 101 ntBASIC0.81□□□□□ -2.28
NPIPA1Q9UND3 SNORA70.12-201ENST00000516084 153 ntBASIC0.81□□□□□ -2.28
NPIPA1Q9UND3 MIR5000-201ENST00000577717 103 ntBASIC0.81□□□□□ -2.28
NPIPA1Q9UND3 AC004832.4-201ENST00000608952 331 ntBASIC0.81□□□□□ -2.28
NPIPA1Q9UND3 AL591926.4-201ENST00000616895 298 ntBASIC0.81□□□□□ -2.28
NPIPA1Q9UND3 AC139792.2-201ENST00000624218 587 ntBASIC0.81□□□□□ -2.28
NPIPA1Q9UND3 AC098679.4-201ENST00000624241 654 ntBASIC0.81□□□□□ -2.28
NPIPA1Q9UND3 Y_RNA.101-201ENST00000363154 102 ntBASIC0.8□□□□□ -2.28
NPIPA1Q9UND3 RNU6-324P-201ENST00000363957 106 ntBASIC0.8□□□□□ -2.28
NPIPA1Q9UND3 Y_RNA.336-201ENST00000365307 109 ntBASIC0.8□□□□□ -2.28
NPIPA1Q9UND3 SNORD116-13-201ENST00000384408 92 ntBASIC0.8□□□□□ -2.28
NPIPA1Q9UND3 Y_RNA.577-201ENST00000384794 101 ntBASIC0.8□□□□□ -2.28
NPIPA1Q9UND3 SNORA75.2-201ENST00000391138 150 ntBASIC0.8□□□□□ -2.28
NPIPA1Q9UND3 SNORA75.3-201ENST00000391231 150 ntBASIC0.8□□□□□ -2.28
NPIPA1Q9UND3 RNU6-876P-201ENST00000391295 104 ntBASIC0.8□□□□□ -2.28
NPIPA1Q9UND3 AL031003.1-201ENST00000404229 172 ntBASIC0.8□□□□□ -2.28
NPIPA1Q9UND3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.8□□□□□ -2.28
NPIPA1Q9UND3 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.8□□□□□ -2.28
NPIPA1Q9UND3 RNU7-21P-201ENST00000459430 62 ntBASIC0.8□□□□□ -2.28
NPIPA1Q9UND3 RNA5SP436-201ENST00000516020 115 ntBASIC0.8□□□□□ -2.28
NPIPA1Q9UND3 AC090142.3-201ENST00000519012 385 ntBASIC0.8□□□□□ -2.28
NPIPA1Q9UND3 MIR3192-201ENST00000584920 77 ntBASIC0.8□□□□□ -2.28
NPIPA1Q9UND3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.8□□□□□ -2.28
NPIPA1Q9UND3 AC027279.3-201ENST00000625055 122 ntBASIC0.8□□□□□ -2.28
NPIPA1Q9UND3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
NPIPA1Q9UND3 RNU6-310P-201ENST00000384655 107 ntBASIC0.79□□□□□ -2.28
NPIPA1Q9UND3 MIR200A-201ENST00000384875 90 ntBASIC0.79□□□□□ -2.28
NPIPA1Q9UND3 MIR452-201ENST00000385020 85 ntBASIC0.79□□□□□ -2.28
NPIPA1Q9UND3 MIR516B2-201ENST00000385190 85 ntBASIC0.79□□□□□ -2.28
NPIPA1Q9UND3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.79□□□□□ -2.28
NPIPA1Q9UND3 MIR1298-201ENST00000408783 112 ntBASIC0.79□□□□□ -2.28
NPIPA1Q9UND3 Y_RNA.605-201ENST00000410577 105 ntBASIC0.79□□□□□ -2.28
NPIPA1Q9UND3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.79□□□□□ -2.28
NPIPA1Q9UND3 AC245047.8-201ENST00000456455 284 ntBASIC0.79□□□□□ -2.28
NPIPA1Q9UND3 RPL30P15-201ENST00000457129 321 ntBASIC0.79□□□□□ -2.28
NPIPA1Q9UND3 snoU13.25-201ENST00000458945 104 ntBASIC0.79□□□□□ -2.28
NPIPA1Q9UND3 RNU7-90P-201ENST00000459216 62 ntBASIC0.79□□□□□ -2.28
NPIPA1Q9UND3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.79□□□□□ -2.28
NPIPA1Q9UND3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.79□□□□□ -2.28
NPIPA1Q9UND3 MIR5690-201ENST00000583739 73 ntBASIC0.79□□□□□ -2.28
NPIPA1Q9UND3 PRELID3BP2-201ENST00000605362 201 ntBASIC0.79□□□□□ -2.28
NPIPA1Q9UND3 PVT1_3.1-201ENST00000620853 95 ntBASIC0.79□□□□□ -2.28
NPIPA1Q9UND3 TPTEP1-208ENST00000636884 213 ntBASIC0.79□□□□□ -2.28
NPIPA1Q9UND3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.79□□□□□ -2.28
NPIPA1Q9UND3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
NPIPA1Q9UND3 Y_RNA.166-201ENST00000363730 102 ntBASIC0.78□□□□□ -2.28
NPIPA1Q9UND3 Y_RNA.172-201ENST00000363765 102 ntBASIC0.78□□□□□ -2.28
NPIPA1Q9UND3 Y_RNA.330-201ENST00000365230 109 ntBASIC0.78□□□□□ -2.28
NPIPA1Q9UND3 RNU6-192P-201ENST00000391253 100 ntBASIC0.78□□□□□ -2.28
NPIPA1Q9UND3 SNORA75.6-201ENST00000391318 127 ntBASIC0.78□□□□□ -2.28
NPIPA1Q9UND3 PDCL2P1-201ENST00000419302 352 ntBASIC0.78□□□□□ -2.28
NPIPA1Q9UND3 AC093019.1-201ENST00000443135 252 ntBASIC0.78□□□□□ -2.28
NPIPA1Q9UND3 FCF1P4-201ENST00000448326 183 ntBASIC0.78□□□□□ -2.28
NPIPA1Q9UND3 AC144568.1-201ENST00000520139 137 ntBASIC0.78□□□□□ -2.28
NPIPA1Q9UND3 AC005176.2-201ENST00000596933 147 ntBASIC0.78□□□□□ -2.28
NPIPA1Q9UND3 AL391903.3-201ENST00000612158 163 ntBASIC0.78□□□□□ -2.28
NPIPA1Q9UND3 AC011476.5-201ENST00000615594 130 ntBASIC0.78□□□□□ -2.28
NPIPA1Q9UND3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.78□□□□□ -2.28
NPIPA1Q9UND3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.78□□□□□ -2.28
NPIPA1Q9UND3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
NPIPA1Q9UND3 RNU6-1084P-201ENST00000362498 107 ntBASIC0.77□□□□□ -2.29
NPIPA1Q9UND3 RNU6-626P-201ENST00000363354 107 ntBASIC0.77□□□□□ -2.29
NPIPA1Q9UND3 RNU6-1188P-201ENST00000363795 107 ntBASIC0.77□□□□□ -2.29
NPIPA1Q9UND3 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
NPIPA1Q9UND3 Y_RNA.279-201ENST00000364763 95 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms