Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AC022616.4-201ENST00000522985 181 ntBASIC0.03□□□□□ -2.4
VCX3BQ9H321 MIR5701-3-201ENST00000578890 82 ntBASIC0.03□□□□□ -2.4
VCX3BQ9H321 MIR5701-1-201ENST00000585138 82 ntBASIC0.03□□□□□ -2.4
VCX3BQ9H321 MIR3942-201ENST00000585264 109 ntBASIC0.03□□□□□ -2.4
VCX3BQ9H321 LARP7P1-201ENST00000605576 316 ntBASIC0.03□□□□□ -2.4
VCX3BQ9H321 MIR5701-2-201ENST00000615634 82 ntBASIC0.03□□□□□ -2.4
VCX3BQ9H321 AL391262.2-201ENST00000622466 494 ntBASIC0.03□□□□□ -2.4
VCX3BQ9H321 RNU6-451P-201ENST00000362921 107 ntBASIC0.02□□□□□ -2.41
VCX3BQ9H321 RNY1P16-201ENST00000363063 111 ntBASIC0.02□□□□□ -2.41
VCX3BQ9H321 Y_RNA.148-201ENST00000363557 117 ntBASIC0.02□□□□□ -2.41
VCX3BQ9H321 Y_RNA.172-201ENST00000363765 102 ntBASIC0.02□□□□□ -2.41
VCX3BQ9H321 RNU6-580P-201ENST00000365159 107 ntBASIC0.02□□□□□ -2.41
VCX3BQ9H321 RNU6-318P-201ENST00000384283 103 ntBASIC0.02□□□□□ -2.41
VCX3BQ9H321 RNU6-1119P-201ENST00000384349 108 ntBASIC0.02□□□□□ -2.41
VCX3BQ9H321 RNU6-131P-201ENST00000391144 107 ntBASIC0.02□□□□□ -2.41
VCX3BQ9H321 MIR936-201ENST00000401264 98 ntBASIC0.02□□□□□ -2.41
VCX3BQ9H321 SNORA40.8-201ENST00000411034 126 ntBASIC0.02□□□□□ -2.41
VCX3BQ9H321 UBE2V1P7-201ENST00000446395 340 ntBASIC0.02□□□□□ -2.41
VCX3BQ9H321 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.02□□□□□ -2.41
VCX3BQ9H321 AC116353.2-201ENST00000505332 712 ntBASIC0.02□□□□□ -2.41
VCX3BQ9H321 SNORA25.12-201ENST00000516202 82 ntBASIC0.02□□□□□ -2.41
VCX3BQ9H321 RNU6-977P-201ENST00000516411 103 ntBASIC0.02□□□□□ -2.41
VCX3BQ9H321 RNU2-12P-201ENST00000517216 168 ntBASIC0.02□□□□□ -2.41
VCX3BQ9H321 AC006362.1-201ENST00000567392 174 ntBASIC0.02□□□□□ -2.41
VCX3BQ9H321 MIR548AO-201ENST00000579992 96 ntBASIC0.02□□□□□ -2.41
VCX3BQ9H321 SNORA25.18-201ENST00000607153 114 ntBASIC0.02□□□□□ -2.41
VCX3BQ9H321 AC078938.1-201ENST00000620993 318 ntBASIC0.02□□□□□ -2.41
VCX3BQ9H321 AC124864.2-201ENST00000624736 186 ntBASIC0.02□□□□□ -2.41
VCX3BQ9H321 AC090582.1-201ENST00000636321 199 ntBASIC0.02□□□□□ -2.41
VCX3BQ9H321 RNU6-815P-201ENST00000384080 113 ntBASIC0.01□□□□□ -2.41
VCX3BQ9H321 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
VCX3BQ9H321 RNU6-205P-201ENST00000390858 107 ntBASIC0.01□□□□□ -2.41
VCX3BQ9H321 RNA5SP247-201ENST00000411181 105 ntBASIC0.01□□□□□ -2.41
VCX3BQ9H321 USP9YP30-201ENST00000430729 455 ntBASIC0.01□□□□□ -2.41
VCX3BQ9H321 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.01□□□□□ -2.41
VCX3BQ9H321 RNU6-863P-201ENST00000515989 104 ntBASIC0.01□□□□□ -2.41
VCX3BQ9H321 Y_RNA.704-201ENST00000516851 102 ntBASIC0.01□□□□□ -2.41
VCX3BQ9H321 RNA5SP94-201ENST00000516917 108 ntBASIC0.01□□□□□ -2.41
VCX3BQ9H321 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.01□□□□□ -2.41
VCX3BQ9H321 MIR4771-2-201ENST00000577758 74 ntBASIC0.01□□□□□ -2.41
VCX3BQ9H321 MIR4771-1-201ENST00000582617 74 ntBASIC0.01□□□□□ -2.41
VCX3BQ9H321 AL359757.2-201ENST00000624309 274 ntBASIC0.01□□□□□ -2.41
VCX3BQ9H321 Y_RNA.77-201ENST00000362962 107 ntBASIC0□□□□□ -2.41
VCX3BQ9H321 RNY3P3-201ENST00000363816 102 ntBASIC0□□□□□ -2.41
VCX3BQ9H321 RNU1-133P-201ENST00000364867 167 ntBASIC0□□□□□ -2.41
VCX3BQ9H321 Y_RNA.368-201ENST00000365547 113 ntBASIC0□□□□□ -2.41
VCX3BQ9H321 Y_RNA.557-201ENST00000384680 107 ntBASIC0□□□□□ -2.41
VCX3BQ9H321 RNU6-679P-201ENST00000391003 106 ntBASIC0□□□□□ -2.41
VCX3BQ9H321 RNU2-54P-201ENST00000410299 190 ntBASIC0□□□□□ -2.41
VCX3BQ9H321 MTCO2P27-201ENST00000420740 428 ntBASIC0□□□□□ -2.41
VCX3BQ9H321 MTND2P9-201ENST00000422293 931 ntBASIC0□□□□□ -2.41
VCX3BQ9H321 AC073261.1-201ENST00000429409 121 ntBASIC0□□□□□ -2.41
VCX3BQ9H321 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0□□□□□ -2.41
VCX3BQ9H321 RNU7-87P-201ENST00000459343 62 ntBASIC0□□□□□ -2.41
VCX3BQ9H321 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0□□□□□ -2.41
VCX3BQ9H321 AC019235.1-201ENST00000503847 207 ntBASIC0□□□□□ -2.41
VCX3BQ9H321 RNU6-1223P-201ENST00000517124 104 ntBASIC0□□□□□ -2.41
VCX3BQ9H321 AC105029.1-201ENST00000520250 669 ntBASIC0□□□□□ -2.41
VCX3BQ9H321 AC055872.1-201ENST00000570978 278 ntBASIC0□□□□□ -2.41
VCX3BQ9H321 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0□□□□□ -2.41
VCX3BQ9H321 MIR4804-201ENST00000581683 73 ntBASIC0□□□□□ -2.41
VCX3BQ9H321 RAC1P9-201ENST00000604990 392 ntBASIC0□□□□□ -2.41
VCX3BQ9H321 AC005014.2-201ENST00000607795 599 ntBASIC0□□□□□ -2.41
VCX3BQ9H321 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0□□□□□ -2.41
VCX3BQ9H321 MIR4315-1-201ENST00000636800 73 ntBASIC0□□□□□ -2.41
VCX3BQ9H321 MIR4315-2-201ENST00000640925 73 ntBASIC0□□□□□ -2.41
VCX3BQ9H321 AL589743.1-201ENST00000551932 2712 ntBASIC-0.01□□□□□ -2.41
VCX3BQ9H321 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
VCX3BQ9H321 SNORA42.1-201ENST00000363515 137 ntBASIC-0.01□□□□□ -2.41
VCX3BQ9H321 RNU6-934P-201ENST00000365154 107 ntBASIC-0.01□□□□□ -2.41
VCX3BQ9H321 RNU6-483P-201ENST00000384088 108 ntBASIC-0.01□□□□□ -2.41
VCX3BQ9H321 SNORD38C-201ENST00000384381 69 ntBASIC-0.01□□□□□ -2.41
VCX3BQ9H321 AL031003.1-201ENST00000404229 172 ntBASIC-0.01□□□□□ -2.41
VCX3BQ9H321 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC-0.01□□□□□ -2.41
VCX3BQ9H321 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.01□□□□□ -2.41
VCX3BQ9H321 BTF3P11-201ENST00000426582 477 ntBASIC-0.01□□□□□ -2.41
VCX3BQ9H321 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.01□□□□□ -2.41
VCX3BQ9H321 SNORD5.1-201ENST00000458800 75 ntBASIC-0.01□□□□□ -2.41
VCX3BQ9H321 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.01□□□□□ -2.41
VCX3BQ9H321 AC093534.1-201ENST00000504977 132 ntBASIC-0.01□□□□□ -2.41
VCX3BQ9H321 RNU6-237P-201ENST00000515985 71 ntBASIC-0.01□□□□□ -2.41
VCX3BQ9H321 RNU6-273P-201ENST00000516937 96 ntBASIC-0.01□□□□□ -2.41
VCX3BQ9H321 RNU1-54P-201ENST00000517181 120 ntBASIC-0.01□□□□□ -2.41
VCX3BQ9H321 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.01□□□□□ -2.41
VCX3BQ9H321 AC069113.3-201ENST00000521019 150 ntBASIC-0.01□□□□□ -2.41
VCX3BQ9H321 MIR4676-201ENST00000583078 72 ntBASIC-0.01□□□□□ -2.41
VCX3BQ9H321 NBR2-204ENST00000587322 63 ntBASIC-0.01□□□□□ -2.41
VCX3BQ9H321 AC020891.4-201ENST00000605745 93 ntBASIC-0.01□□□□□ -2.41
VCX3BQ9H321 MIR924-201ENST00000638017 53 ntBASIC-0.01□□□□□ -2.41
VCX3BQ9H321 SNORD118-201ENST00000363593 134 ntBASIC-0.02□□□□□ -2.41
VCX3BQ9H321 SNORD14E-201ENST00000364009 85 ntBASIC-0.02□□□□□ -2.41
VCX3BQ9H321 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.02□□□□□ -2.41
VCX3BQ9H321 RNU6-259P-201ENST00000383999 107 ntBASIC-0.02□□□□□ -2.41
VCX3BQ9H321 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.02□□□□□ -2.41
VCX3BQ9H321 RNU6-1042P-201ENST00000384204 107 ntBASIC-0.02□□□□□ -2.41
VCX3BQ9H321 SNORA51.10-201ENST00000384418 136 ntBASIC-0.02□□□□□ -2.41
VCX3BQ9H321 RNU6-125P-201ENST00000384505 107 ntBASIC-0.02□□□□□ -2.41
VCX3BQ9H321 RNU6-700P-201ENST00000391043 107 ntBASIC-0.02□□□□□ -2.41
VCX3BQ9H321 RNU6-332P-201ENST00000391193 108 ntBASIC-0.02□□□□□ -2.41
VCX3BQ9H321 RNU2-66P-201ENST00000410650 161 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms