Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 SNORD116.3-201ENST00000517176 78 ntBASIC1□□□□□ -2.25
CDX2Q99626 AC022868.1-201ENST00000517767 391 ntBASIC1□□□□□ -2.25
CDX2Q99626 AC006600.1-201ENST00000572529 153 ntBASIC1□□□□□ -2.25
CDX2Q99626 MIR5695-201ENST00000579717 85 ntBASIC1□□□□□ -2.25
CDX2Q99626 RNU6-961P-201ENST00000363893 105 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 SNORD115-32-201ENST00000364079 82 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 Y_RNA.364-201ENST00000365532 101 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 Y_RNA.428-201ENST00000384078 102 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 RNU6-738P-201ENST00000384531 106 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 MIR515-2-201ENST00000384883 83 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 MIR515-1-201ENST00000384884 83 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 MIR329-1-201ENST00000385028 80 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 RNU6-823P-201ENST00000391042 103 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 MRPL42P3-201ENST00000401492 326 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 MIR1302-11-201ENST00000408051 138 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 MIR1302-9-201ENST00000408365 138 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 MIR1302-10-201ENST00000408734 138 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 RNA5SP193-201ENST00000410353 107 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.99□□□□□ -2.25
CDX2Q99626 ELOCP20-201ENST00000422460 345 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.99□□□□□ -2.25
CDX2Q99626 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.99□□□□□ -2.25
CDX2Q99626 AC114982.1-201ENST00000469402 321 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 RPS26P45-201ENST00000471748 340 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 AC091179.3-201ENST00000474761 144 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 RPL30P7-201ENST00000479312 323 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 RNU6-976P-201ENST00000516086 111 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 AL442163.3-201ENST00000554110 156 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.99□□□□□ -2.25
CDX2Q99626 RAC1P9-201ENST00000604990 392 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 MIR1302-2-201ENST00000607096 138 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 Y_RNA.812-201ENST00000610788 101 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 Y_RNA.784-201ENST00000613803 101 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 Y_RNA.787-201ENST00000616522 101 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 Y_RNA.780-201ENST00000617336 101 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 Y_RNA.801-201ENST00000619005 101 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 AL121890.5-201ENST00000620848 304 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 AL078596.1-201ENST00000624856 447 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.99□□□□□ -2.25
CDX2Q99626 AL606534.2-204ENST00000635008 178 ntBASIC0.99□□□□□ -2.25
CDX2Q99626 RNU6-1301P-201ENST00000362724 104 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 Y_RNA.214-201ENST00000364201 112 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 RNU4-9P-201ENST00000364951 139 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 Y_RNA.319-201ENST00000365138 92 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 Y_RNA.415-201ENST00000384012 112 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 RNU6-245P-201ENST00000384020 107 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 MIR215-201ENST00000384858 110 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 RNU6-159P-201ENST00000391080 106 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.98□□□□□ -2.25
CDX2Q99626 AC098934.3-201ENST00000430450 190 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 RNU6-221P-201ENST00000459541 99 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 RNU7-175P-201ENST00000515915 61 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 RNU6-327P-201ENST00000516270 127 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 RNU6-264P-201ENST00000517134 104 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 RNU7-128P-201ENST00000517247 62 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CDX2Q99626 AC024995.1-201ENST00000523014 93 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 AC136932.1-201ENST00000574771 208 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.98□□□□□ -2.25
CDX2Q99626 AC113195.1-201ENST00000579952 141 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 AC008737.2-201ENST00000599446 118 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 SNRPGP20-201ENST00000604477 205 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 AC108706.1-201ENST00000611053 297 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 AL078604.3-201ENST00000615580 211 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.98□□□□□ -2.25
CDX2Q99626 U2.1-201ENST00000618978 145 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 AC137590.2-201ENST00000619709 240 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 U6.92-201ENST00000636464 89 ntBASIC0.98□□□□□ -2.25
CDX2Q99626 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CDX2Q99626 AC005592.1-201ENST00000566527 1640 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 Y_RNA.64-201ENST00000362845 102 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 Y_RNA.162-201ENST00000363683 102 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 Y_RNA.202-201ENST00000364083 110 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 RNU6-879P-201ENST00000364328 108 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 Y_RNA.274-201ENST00000364714 101 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 Y_RNA.286-201ENST00000364813 102 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 RNU6-102P-201ENST00000384485 104 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 RNU6-1160P-201ENST00000384546 104 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 SNORA12.1-201ENST00000390873 148 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 ELOCP21-201ENST00000412558 336 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 AC004941.2-201ENST00000427009 228 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 AL606517.2-201ENST00000442855 241 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 AC073910.1-201ENST00000445047 438 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 OR2A41P-201ENST00000473586 105 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 AC079140.2-201ENST00000506193 142 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 AC025647.1-201ENST00000517879 253 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 AC091144.1-201ENST00000519573 138 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 AC040926.1-201ENST00000530195 238 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 AC093023.1-201ENST00000547375 507 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.97□□□□□ -2.25
CDX2Q99626 AC133485.1-201ENST00000567176 124 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 AC138907.6-201ENST00000568401 126 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 AC005899.2-201ENST00000584353 90 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 MIR4719-201ENST00000585233 84 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 AL390123.1-201ENST00000603216 237 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 snoZ196.1-201ENST00000625269 89 ntBASIC0.97□□□□□ -2.25
CDX2Q99626 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CDX2Q99626 SNORD33-201ENST00000362761 85 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 Y_RNA.101-201ENST00000363154 102 ntBASIC0.96□□□□□ -2.26
CDX2Q99626 Y_RNA.133-201ENST00000363428 110 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms