Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 MTND3P21-201ENST00000433774 331 ntBASIC0.18□□□□□ -2.38
PCDH15Q96QU1 RNU7-175P-201ENST00000515915 61 ntBASIC0.18□□□□□ -2.38
PCDH15Q96QU1 RNU6-977P-201ENST00000516411 103 ntBASIC0.18□□□□□ -2.38
PCDH15Q96QU1 AC091144.1-201ENST00000519573 138 ntBASIC0.18□□□□□ -2.38
PCDH15Q96QU1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.18□□□□□ -2.38
PCDH15Q96QU1 AL357075.2-201ENST00000614906 189 ntBASIC0.18□□□□□ -2.38
PCDH15Q96QU1 AL359880.1-201ENST00000621879 266 ntBASIC0.18□□□□□ -2.38
PCDH15Q96QU1 Y_RNA.41-201ENST00000362646 102 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 RNU6-961P-201ENST00000363893 105 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 Y_RNA.185-201ENST00000363894 100 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 RNU6-324P-201ENST00000363957 106 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
PCDH15Q96QU1 MIR1298-201ENST00000408783 112 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 RNU2-54P-201ENST00000410299 190 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 RNU5A-5P-201ENST00000411054 116 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 AL354751.2-201ENST00000415471 210 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 UQCRBP2-201ENST00000447827 297 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.17□□□□□ -2.38
PCDH15Q96QU1 MTCO3P10-201ENST00000455912 772 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.17□□□□□ -2.38
PCDH15Q96QU1 RNU4-49P-201ENST00000516080 140 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 RN7SKP164-201ENST00000516138 266 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 RNU6-758P-201ENST00000516292 89 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.17□□□□□ -2.38
PCDH15Q96QU1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.17□□□□□ -2.38
PCDH15Q96QU1 AC011195.1-201ENST00000578177 177 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 MIR5188-201ENST00000583467 113 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 AL591926.4-201ENST00000616895 298 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.17□□□□□ -2.38
PCDH15Q96QU1 MTND5P26-201ENST00000426018 1752 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
PCDH15Q96QU1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.17□□□□□ -2.38
PCDH15Q96QU1 Y_RNA.170-201ENST00000363746 110 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 SNORD115-30-201ENST00000364117 82 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 RNU6-348P-201ENST00000384386 107 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 SNORD41-201ENST00000386967 70 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
PCDH15Q96QU1 RNU6-700P-201ENST00000391043 107 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 CALM2P3-201ENST00000400429 449 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 RNA5SP475-201ENST00000410568 110 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 RPS3AP1-201ENST00000413190 320 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 Z95118.1-201ENST00000421372 247 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.17□□□□□ -2.38
PCDH15Q96QU1 UBE2V1P7-201ENST00000446395 340 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 RNU6-107P-201ENST00000516643 102 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 AL355375.2-201ENST00000574825 175 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 AC010999.1-201ENST00000611856 324 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 AC092794.2-201ENST00000620933 563 ntBASIC0.17□□□□□ -2.38
PCDH15Q96QU1 RNU6-1266P-201ENST00000362794 105 ntBASIC0.16□□□□□ -2.38
PCDH15Q96QU1 SNORD50.1-201ENST00000362987 71 ntBASIC0.16□□□□□ -2.38
PCDH15Q96QU1 RNU6-767P-201ENST00000384132 107 ntBASIC0.16□□□□□ -2.38
PCDH15Q96QU1 RNU6-842P-201ENST00000384269 107 ntBASIC0.16□□□□□ -2.38
PCDH15Q96QU1 SNORD116-8-201ENST00000384365 95 ntBASIC0.16□□□□□ -2.38
PCDH15Q96QU1 RNA5SP219-201ENST00000390940 113 ntBASIC0.16□□□□□ -2.38
PCDH15Q96QU1 RNU6-131P-201ENST00000391144 107 ntBASIC0.16□□□□□ -2.38
PCDH15Q96QU1 MIR1827-201ENST00000408549 66 ntBASIC0.16□□□□□ -2.38
PCDH15Q96QU1 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.16□□□□□ -2.38
PCDH15Q96QU1 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.16□□□□□ -2.38
PCDH15Q96QU1 SNORA68.3-201ENST00000515906 83 ntBASIC0.16□□□□□ -2.38
PCDH15Q96QU1 AP001180.6-201ENST00000584918 159 ntBASIC0.16□□□□□ -2.38
PCDH15Q96QU1 AC124303.1-201ENST00000605703 360 ntBASIC0.16□□□□□ -2.38
PCDH15Q96QU1 AC019193.3-201ENST00000609144 554 ntBASIC0.16□□□□□ -2.38
PCDH15Q96QU1 AL096861.1-201ENST00000610899 123 ntBASIC0.16□□□□□ -2.38
PCDH15Q96QU1 AL121757.2-201ENST00000611223 313 ntBASIC0.16□□□□□ -2.38
PCDH15Q96QU1 AC005592.1-201ENST00000566527 1640 ntBASIC0.16□□□□□ -2.38
PCDH15Q96QU1 MIR18A-201ENST00000362310 71 ntBASIC0.15□□□□□ -2.38
PCDH15Q96QU1 Y_RNA.168-201ENST00000363740 102 ntBASIC0.15□□□□□ -2.38
PCDH15Q96QU1 Y_RNA.243-201ENST00000364481 109 ntBASIC0.15□□□□□ -2.38
PCDH15Q96QU1 SNORD114-15-201ENST00000364687 72 ntBASIC0.15□□□□□ -2.38
PCDH15Q96QU1 RNU6-923P-201ENST00000364753 107 ntBASIC0.15□□□□□ -2.38
PCDH15Q96QU1 RNY1P8-201ENST00000383970 114 ntBASIC0.15□□□□□ -2.38
PCDH15Q96QU1 AC073261.1-201ENST00000429409 121 ntBASIC0.15□□□□□ -2.38
PCDH15Q96QU1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.15□□□□□ -2.38
PCDH15Q96QU1 RNU6-863P-201ENST00000515989 104 ntBASIC0.15□□□□□ -2.38
PCDH15Q96QU1 SNORA74.3-201ENST00000517108 154 ntBASIC0.15□□□□□ -2.38
PCDH15Q96QU1 AC022616.4-201ENST00000522985 181 ntBASIC0.15□□□□□ -2.38
PCDH15Q96QU1 MIR548AR-201ENST00000582191 57 ntBASIC0.15□□□□□ -2.38
PCDH15Q96QU1 AC092634.7-201ENST00000621022 103 ntBASIC0.15□□□□□ -2.38
PCDH15Q96QU1 U6.115-201ENST00000636045 103 ntBASIC0.15□□□□□ -2.38
PCDH15Q96QU1 AC090625.1-201ENST00000357130 210 ntBASIC0.15□□□□□ -2.39
PCDH15Q96QU1 Y_RNA.135-201ENST00000363439 95 ntBASIC0.15□□□□□ -2.39
PCDH15Q96QU1 RNU6-1085P-201ENST00000363576 107 ntBASIC0.15□□□□□ -2.39
PCDH15Q96QU1 RNU6-780P-201ENST00000391030 104 ntBASIC0.15□□□□□ -2.39
PCDH15Q96QU1 RNU7-56P-201ENST00000458744 62 ntBASIC0.15□□□□□ -2.39
PCDH15Q96QU1 RN7SKP298-201ENST00000515950 94 ntBASIC0.15□□□□□ -2.39
PCDH15Q96QU1 RNU6-1337P-201ENST00000516525 95 ntBASIC0.15□□□□□ -2.39
PCDH15Q96QU1 RNU6-256P-201ENST00000516747 97 ntBASIC0.15□□□□□ -2.39
PCDH15Q96QU1 Y_RNA.714-201ENST00000517065 90 ntBASIC0.15□□□□□ -2.39
PCDH15Q96QU1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.15□□□□□ -2.39
PCDH15Q96QU1 AC023442.1-201ENST00000531247 422 ntBASIC0.15□□□□□ -2.39
PCDH15Q96QU1 AC018448.1-201ENST00000552843 316 ntBASIC0.15□□□□□ -2.39
PCDH15Q96QU1 MIR4493-201ENST00000584016 73 ntBASIC0.15□□□□□ -2.39
PCDH15Q96QU1 AC010525.2-201ENST00000590920 195 ntBASIC0.15□□□□□ -2.39
PCDH15Q96QU1 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.15□□□□□ -2.39
PCDH15Q96QU1 SNORA72.1-201ENST00000363485 129 ntBASIC0.14□□□□□ -2.39
PCDH15Q96QU1 RNU6-595P-201ENST00000363944 107 ntBASIC0.14□□□□□ -2.39
PCDH15Q96QU1 SNORA20B-201ENST00000384220 132 ntBASIC0.14□□□□□ -2.39
PCDH15Q96QU1 MRPS10P2-201ENST00000431226 381 ntBASIC0.14□□□□□ -2.39
PCDH15Q96QU1 RNU6-448P-201ENST00000517052 107 ntBASIC0.14□□□□□ -2.39
PCDH15Q96QU1 Y_RNA.717-201ENST00000517106 92 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 310 ms