Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC116353.2-201ENST00000505332 712 ntBASIC0.71□□□□□ -2.3
FDFT1P37268 RNU2-12P-201ENST00000517216 168 ntBASIC0.71□□□□□ -2.3
FDFT1P37268 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.71□□□□□ -2.3
FDFT1P37268 MIR3192-201ENST00000584920 77 ntBASIC0.71□□□□□ -2.3
FDFT1P37268 AC060780.3-201ENST00000589464 80 ntBASIC0.71□□□□□ -2.3
FDFT1P37268 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.71□□□□□ -2.3
FDFT1P37268 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
FDFT1P37268 AL591926.4-201ENST00000616895 298 ntBASIC0.71□□□□□ -2.3
FDFT1P37268 Y_RNA.72-201ENST00000362894 103 ntBASIC0.7□□□□□ -2.3
FDFT1P37268 SNORD115-30-201ENST00000364117 82 ntBASIC0.7□□□□□ -2.3
FDFT1P37268 MIR520E-201ENST00000384867 87 ntBASIC0.7□□□□□ -2.3
FDFT1P37268 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.7□□□□□ -2.3
FDFT1P37268 snoU13.25-201ENST00000458945 104 ntBASIC0.7□□□□□ -2.3
FDFT1P37268 RPS29P1-201ENST00000465274 159 ntBASIC0.7□□□□□ -2.3
FDFT1P37268 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.7□□□□□ -2.3
FDFT1P37268 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.7□□□□□ -2.3
FDFT1P37268 RNA5SP255-201ENST00000516370 107 ntBASIC0.7□□□□□ -2.3
FDFT1P37268 RNU7-30P-201ENST00000516835 62 ntBASIC0.7□□□□□ -2.3
FDFT1P37268 RNU6-1213P-201ENST00000517075 94 ntBASIC0.7□□□□□ -2.3
FDFT1P37268 AC006380.1-201ENST00000603598 186 ntBASIC0.7□□□□□ -2.3
FDFT1P37268 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.7□□□□□ -2.3
FDFT1P37268 CASC19-280ENST00000642102 1351 ntBASIC0.7□□□□□ -2.3
FDFT1P37268 AC068700.1-201ENST00000565862 3754 ntBASIC0.69□□□□□ -2.3
FDFT1P37268 RNU6-961P-201ENST00000363893 105 ntBASIC0.69□□□□□ -2.3
FDFT1P37268 Y_RNA.330-201ENST00000365230 109 ntBASIC0.69□□□□□ -2.3
FDFT1P37268 Y_RNA.508-201ENST00000384502 114 ntBASIC0.69□□□□□ -2.3
FDFT1P37268 SNORA69.1-201ENST00000390904 137 ntBASIC0.69□□□□□ -2.3
FDFT1P37268 MIR1298-201ENST00000408783 112 ntBASIC0.69□□□□□ -2.3
FDFT1P37268 MTND4P28-201ENST00000426217 387 ntBASIC0.69□□□□□ -2.3
FDFT1P37268 AC117454.1-201ENST00000491120 168 ntBASIC0.69□□□□□ -2.3
FDFT1P37268 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.69□□□□□ -2.3
FDFT1P37268 RNA5SP220-201ENST00000516298 104 ntBASIC0.69□□□□□ -2.3
FDFT1P37268 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.69□□□□□ -2.3
FDFT1P37268 AC011604.1-201ENST00000545978 196 ntBASIC0.69□□□□□ -2.3
FDFT1P37268 MIR151B-201ENST00000584249 96 ntBASIC0.69□□□□□ -2.3
FDFT1P37268 AC084782.3-201ENST00000612282 578 ntBASIC0.69□□□□□ -2.3
FDFT1P37268 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
FDFT1P37268 AL669831.3-213ENST00000636676 183 ntBASIC0.69□□□□□ -2.3
FDFT1P37268 Y_RNA.361-201ENST00000365515 120 ntBASIC0.68□□□□□ -2.3
FDFT1P37268 RNY1P14-201ENST00000384426 108 ntBASIC0.68□□□□□ -2.3
FDFT1P37268 MIR625-201ENST00000385047 85 ntBASIC0.68□□□□□ -2.3
FDFT1P37268 MIR516B2-201ENST00000385190 85 ntBASIC0.68□□□□□ -2.3
FDFT1P37268 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
FDFT1P37268 AC093019.1-201ENST00000443135 252 ntBASIC0.68□□□□□ -2.3
FDFT1P37268 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.68□□□□□ -2.3
FDFT1P37268 Y_RNA.655-201ENST00000515919 96 ntBASIC0.68□□□□□ -2.3
FDFT1P37268 RNU6-120P-201ENST00000516077 103 ntBASIC0.68□□□□□ -2.3
FDFT1P37268 RNU6-358P-201ENST00000516564 75 ntBASIC0.68□□□□□ -2.3
FDFT1P37268 RNU6-264P-201ENST00000517134 104 ntBASIC0.68□□□□□ -2.3
FDFT1P37268 AC055872.1-201ENST00000570978 278 ntBASIC0.68□□□□□ -2.3
FDFT1P37268 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.68□□□□□ -2.3
FDFT1P37268 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
FDFT1P37268 RNA5SP264-201ENST00000363115 107 ntBASIC0.67□□□□□ -2.3
FDFT1P37268 RNU6-767P-201ENST00000384132 107 ntBASIC0.67□□□□□ -2.3
FDFT1P37268 AL031003.1-201ENST00000404229 172 ntBASIC0.67□□□□□ -2.3
FDFT1P37268 Y_RNA.592-201ENST00000410274 109 ntBASIC0.67□□□□□ -2.3
FDFT1P37268 RNU6-1156P-201ENST00000410365 100 ntBASIC0.67□□□□□ -2.3
FDFT1P37268 MLLT10P1-201ENST00000418346 262 ntBASIC0.67□□□□□ -2.3
FDFT1P37268 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.67□□□□□ -2.3
FDFT1P37268 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.67□□□□□ -2.3
FDFT1P37268 FABP5P4-201ENST00000437203 171 ntBASIC0.67□□□□□ -2.3
FDFT1P37268 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.67□□□□□ -2.3
FDFT1P37268 AC087588.2-201ENST00000617667 426 ntBASIC0.67□□□□□ -2.3
FDFT1P37268 MIR6788-201ENST00000618842 66 ntBASIC0.67□□□□□ -2.3
FDFT1P37268 MIR6734-201ENST00000621166 68 ntBASIC0.67□□□□□ -2.3
FDFT1P37268 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.67□□□□□ -2.3
FDFT1P37268 MIR103A2-201ENST00000362154 78 ntBASIC0.66□□□□□ -2.3
FDFT1P37268 Y_RNA.101-201ENST00000363154 102 ntBASIC0.66□□□□□ -2.3
FDFT1P37268 Y_RNA.796-201ENST00000364268 102 ntBASIC0.66□□□□□ -2.3
FDFT1P37268 U8.5-201ENST00000364528 136 ntBASIC0.66□□□□□ -2.3
FDFT1P37268 Y_RNA.799-201ENST00000364992 102 ntBASIC0.66□□□□□ -2.3
FDFT1P37268 RNU6-42P-201ENST00000384165 107 ntBASIC0.66□□□□□ -2.3
FDFT1P37268 RNU6-110P-201ENST00000384508 104 ntBASIC0.66□□□□□ -2.3
FDFT1P37268 Y_RNA.577-201ENST00000384794 101 ntBASIC0.66□□□□□ -2.3
FDFT1P37268 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.66□□□□□ -2.3
FDFT1P37268 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.66□□□□□ -2.3
FDFT1P37268 snoU13.18-201ENST00000459483 104 ntBASIC0.66□□□□□ -2.3
FDFT1P37268 MTND4P17-201ENST00000470444 350 ntBASIC0.66□□□□□ -2.3
FDFT1P37268 SNORA4-201ENST00000584302 138 ntBASIC0.66□□□□□ -2.3
FDFT1P37268 AL590095.2-201ENST00000604136 117 ntBASIC0.66□□□□□ -2.3
FDFT1P37268 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.66□□□□□ -2.3
FDFT1P37268 RNU6-1084P-201ENST00000362498 107 ntBASIC0.65□□□□□ -2.31
FDFT1P37268 SNORA25.3-201ENST00000363205 127 ntBASIC0.65□□□□□ -2.31
FDFT1P37268 Y_RNA.118-201ENST00000363300 101 ntBASIC0.65□□□□□ -2.31
FDFT1P37268 RNU6-324P-201ENST00000363957 106 ntBASIC0.65□□□□□ -2.31
FDFT1P37268 Y_RNA.355-201ENST00000365462 98 ntBASIC0.65□□□□□ -2.31
FDFT1P37268 MIR520C-201ENST00000385005 87 ntBASIC0.65□□□□□ -2.31
FDFT1P37268 MIR605-201ENST00000385078 83 ntBASIC0.65□□□□□ -2.31
FDFT1P37268 MIR136-201ENST00000385207 82 ntBASIC0.65□□□□□ -2.31
FDFT1P37268 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.65□□□□□ -2.31
FDFT1P37268 RNU2-54P-201ENST00000410299 190 ntBASIC0.65□□□□□ -2.31
FDFT1P37268 RNU4-14P-201ENST00000410858 122 ntBASIC0.65□□□□□ -2.31
FDFT1P37268 FCF1P9-201ENST00000412546 282 ntBASIC0.65□□□□□ -2.31
FDFT1P37268 MRPS18CP6-201ENST00000423587 223 ntBASIC0.65□□□□□ -2.31
FDFT1P37268 FCF1P4-201ENST00000448326 183 ntBASIC0.65□□□□□ -2.31
FDFT1P37268 AC004817.2-201ENST00000561794 651 ntBASIC0.65□□□□□ -2.31
FDFT1P37268 AC023827.1-201ENST00000569247 97 ntBASIC0.65□□□□□ -2.31
FDFT1P37268 MIR4762-201ENST00000585261 75 ntBASIC0.65□□□□□ -2.31
FDFT1P37268 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
FDFT1P37268 AL353765.1-201ENST00000605514 183 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 156.1 ms