Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.3□□□□□ -2.2
GGPS1O95749 RNU6-917P-201ENST00000516294 104 ntBASIC1.3□□□□□ -2.2
GGPS1O95749 RNU6-155P-201ENST00000516347 100 ntBASIC1.3□□□□□ -2.2
GGPS1O95749 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.3□□□□□ -2.2
GGPS1O95749 AC090821.2-201ENST00000523552 176 ntBASIC1.3□□□□□ -2.2
GGPS1O95749 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.3□□□□□ -2.2
GGPS1O95749 MIR548S-201ENST00000581352 82 ntBASIC1.3□□□□□ -2.2
GGPS1O95749 MIR4452-201ENST00000583004 71 ntBASIC1.3□□□□□ -2.2
GGPS1O95749 AC136443.5-201ENST00000603741 370 ntBASIC1.3□□□□□ -2.2
GGPS1O95749 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.3□□□□□ -2.2
GGPS1O95749 Y_RNA.116-201ENST00000363292 103 ntBASIC1.29□□□□□ -2.2
GGPS1O95749 Y_RNA.146-201ENST00000363549 102 ntBASIC1.29□□□□□ -2.2
GGPS1O95749 SNORA25.8-201ENST00000364831 128 ntBASIC1.29□□□□□ -2.2
GGPS1O95749 SNORA2.2-201ENST00000365473 135 ntBASIC1.29□□□□□ -2.2
GGPS1O95749 AL451046.2-201ENST00000403074 277 ntBASIC1.29□□□□□ -2.2
GGPS1O95749 AC093850.1-201ENST00000454121 251 ntBASIC1.29□□□□□ -2.2
GGPS1O95749 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.29□□□□□ -2.2
GGPS1O95749 RNU6-322P-201ENST00000516010 103 ntBASIC1.29□□□□□ -2.2
GGPS1O95749 Y_RNA.702-201ENST00000516843 96 ntBASIC1.29□□□□□ -2.2
GGPS1O95749 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.29□□□□□ -2.2
GGPS1O95749 AC022441.3-201ENST00000605737 136 ntBASIC1.29□□□□□ -2.2
GGPS1O95749 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
GGPS1O95749 RNU6-324P-201ENST00000363957 106 ntBASIC1.28□□□□□ -2.2
GGPS1O95749 Y_RNA.356-201ENST00000365475 113 ntBASIC1.28□□□□□ -2.2
GGPS1O95749 SNORD116-13-201ENST00000384408 92 ntBASIC1.28□□□□□ -2.2
GGPS1O95749 MIR618-201ENST00000385287 98 ntBASIC1.28□□□□□ -2.2
GGPS1O95749 AF228730.4-201ENST00000421457 183 ntBASIC1.28□□□□□ -2.2
GGPS1O95749 AC236972.2-201ENST00000434979 310 ntBASIC1.28□□□□□ -2.2
GGPS1O95749 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.28□□□□□ -2.2
GGPS1O95749 AL133373.1-201ENST00000497098 94 ntBASIC1.28□□□□□ -2.2
GGPS1O95749 RNU6-436P-201ENST00000516171 114 ntBASIC1.28□□□□□ -2.2
GGPS1O95749 RNU6-966P-201ENST00000516479 104 ntBASIC1.28□□□□□ -2.2
GGPS1O95749 MIR4295-201ENST00000585286 85 ntBASIC1.28□□□□□ -2.2
GGPS1O95749 AL117336.2-201ENST00000602435 335 ntBASIC1.28□□□□□ -2.2
GGPS1O95749 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.28□□□□□ -2.2
GGPS1O95749 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.28□□□□□ -2.2
GGPS1O95749 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.27□□□□□ -2.21
GGPS1O95749 Y_RNA.269-201ENST00000364685 89 ntBASIC1.27□□□□□ -2.21
GGPS1O95749 Y_RNA.355-201ENST00000365462 98 ntBASIC1.27□□□□□ -2.21
GGPS1O95749 RNU6-1080P-201ENST00000383982 107 ntBASIC1.27□□□□□ -2.21
GGPS1O95749 Y_RNA.496-201ENST00000384444 101 ntBASIC1.27□□□□□ -2.21
GGPS1O95749 Y_RNA.508-201ENST00000384502 114 ntBASIC1.27□□□□□ -2.21
GGPS1O95749 RNU6-939P-201ENST00000384634 107 ntBASIC1.27□□□□□ -2.21
GGPS1O95749 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.27□□□□□ -2.21
GGPS1O95749 RPEP5-201ENST00000441137 268 ntBASIC1.27□□□□□ -2.21
GGPS1O95749 CYCTP-201ENST00000504253 315 ntBASIC1.27□□□□□ -2.21
GGPS1O95749 RNU6-507P-201ENST00000516045 100 ntBASIC1.27□□□□□ -2.21
GGPS1O95749 RN7SKP295-201ENST00000517264 153 ntBASIC1.27□□□□□ -2.21
GGPS1O95749 AC093027.1-201ENST00000546698 429 ntBASIC1.27□□□□□ -2.21
GGPS1O95749 AC010205.1-201ENST00000616668 449 ntBASIC1.27□□□□□ -2.21
GGPS1O95749 AL138825.1-201ENST00000618587 192 ntBASIC1.27□□□□□ -2.21
GGPS1O95749 RNU6-833P-201ENST00000363486 107 ntBASIC1.26□□□□□ -2.21
GGPS1O95749 Y_RNA.252-201ENST00000364556 101 ntBASIC1.26□□□□□ -2.21
GGPS1O95749 RNU1-115P-201ENST00000365329 160 ntBASIC1.26□□□□□ -2.21
GGPS1O95749 Y_RNA.570-201ENST00000384750 101 ntBASIC1.26□□□□□ -2.21
GGPS1O95749 AC087343.1-201ENST00000477341 475 ntBASIC1.26□□□□□ -2.21
GGPS1O95749 AC120024.3-201ENST00000603167 156 ntBASIC1.26□□□□□ -2.21
GGPS1O95749 AL357312.1-201ENST00000603879 298 ntBASIC1.26□□□□□ -2.21
GGPS1O95749 AC004832.4-201ENST00000608952 331 ntBASIC1.26□□□□□ -2.21
GGPS1O95749 AC027279.3-201ENST00000625055 122 ntBASIC1.26□□□□□ -2.21
GGPS1O95749 AC112487.2-201ENST00000637950 304 ntBASIC1.26□□□□□ -2.21
GGPS1O95749 Y_RNA.39-201ENST00000362620 98 ntBASIC1.25□□□□□ -2.21
GGPS1O95749 RNU1-93P-201ENST00000364704 169 ntBASIC1.25□□□□□ -2.21
GGPS1O95749 RNY3P14-201ENST00000384309 102 ntBASIC1.25□□□□□ -2.21
GGPS1O95749 SNORA25-201ENST00000384384 134 ntBASIC1.25□□□□□ -2.21
GGPS1O95749 RNU6-1105P-201ENST00000384774 107 ntBASIC1.25□□□□□ -2.21
GGPS1O95749 MIR518E-201ENST00000385252 88 ntBASIC1.25□□□□□ -2.21
GGPS1O95749 MIR891A-201ENST00000401237 79 ntBASIC1.25□□□□□ -2.21
GGPS1O95749 Y_RNA.621-201ENST00000411065 96 ntBASIC1.25□□□□□ -2.21
GGPS1O95749 RNU6-976P-201ENST00000516086 111 ntBASIC1.25□□□□□ -2.21
GGPS1O95749 RNU6-1116P-201ENST00000517269 99 ntBASIC1.25□□□□□ -2.21
GGPS1O95749 AC022616.4-201ENST00000522985 181 ntBASIC1.25□□□□□ -2.21
GGPS1O95749 AC011604.1-201ENST00000545978 196 ntBASIC1.25□□□□□ -2.21
GGPS1O95749 MIR4423-201ENST00000580922 80 ntBASIC1.25□□□□□ -2.21
GGPS1O95749 AC092447.9-201ENST00000603395 144 ntBASIC1.25□□□□□ -2.21
GGPS1O95749 AL022345.2-201ENST00000606307 135 ntBASIC1.25□□□□□ -2.21
GGPS1O95749 AC104985.2-201ENST00000620598 500 ntBASIC1.25□□□□□ -2.21
GGPS1O95749 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.25□□□□□ -2.21
GGPS1O95749 AC027335.2-201ENST00000624030 375 ntBASIC1.25□□□□□ -2.21
GGPS1O95749 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
GGPS1O95749 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
GGPS1O95749 Y_RNA.172-201ENST00000363765 102 ntBASIC1.24□□□□□ -2.21
GGPS1O95749 U8.5-201ENST00000364528 136 ntBASIC1.24□□□□□ -2.21
GGPS1O95749 RNU6-1175P-201ENST00000365200 107 ntBASIC1.24□□□□□ -2.21
GGPS1O95749 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
GGPS1O95749 RNU6-1054P-201ENST00000411293 104 ntBASIC1.24□□□□□ -2.21
GGPS1O95749 AL591704.2-201ENST00000421658 181 ntBASIC1.24□□□□□ -2.21
GGPS1O95749 AC104332.1-201ENST00000440471 797 ntBASIC1.24□□□□□ -2.21
GGPS1O95749 AC005042.3-201ENST00000453230 174 ntBASIC1.24□□□□□ -2.21
GGPS1O95749 SNORA31.2-201ENST00000516019 134 ntBASIC1.24□□□□□ -2.21
GGPS1O95749 RNU4-77P-201ENST00000516692 156 ntBASIC1.24□□□□□ -2.21
GGPS1O95749 MIR5188-201ENST00000583467 113 ntBASIC1.24□□□□□ -2.21
GGPS1O95749 MIR4762-201ENST00000585261 75 ntBASIC1.24□□□□□ -2.21
GGPS1O95749 BX284668.6-201ENST00000606899 438 ntBASIC1.24□□□□□ -2.21
GGPS1O95749 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.24□□□□□ -2.21
GGPS1O95749 AL591926.4-201ENST00000616895 298 ntBASIC1.24□□□□□ -2.21
GGPS1O95749 MIR6767-201ENST00000637302 66 ntBASIC1.24□□□□□ -2.21
GGPS1O95749 SNORD68-201ENST00000363214 84 ntBASIC1.23□□□□□ -2.21
GGPS1O95749 RNU6-163P-201ENST00000384396 106 ntBASIC1.23□□□□□ -2.21
GGPS1O95749 MIR1285-1-201ENST00000408593 84 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms