Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.76□□□□□ -2.29
CLDN3O15551 snoU13.25-201ENST00000458945 104 ntBASIC0.76□□□□□ -2.29
CLDN3O15551 RPL17P19-201ENST00000489069 552 ntBASIC0.76□□□□□ -2.29
CLDN3O15551 RNU6-1337P-201ENST00000516525 95 ntBASIC0.76□□□□□ -2.29
CLDN3O15551 RNU6-1223P-201ENST00000517124 104 ntBASIC0.76□□□□□ -2.29
CLDN3O15551 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.76□□□□□ -2.29
CLDN3O15551 AC133485.1-201ENST00000567176 124 ntBASIC0.76□□□□□ -2.29
CLDN3O15551 AC138907.6-201ENST00000568401 126 ntBASIC0.76□□□□□ -2.29
CLDN3O15551 AC006380.1-201ENST00000603598 186 ntBASIC0.76□□□□□ -2.29
CLDN3O15551 AL590095.2-201ENST00000604136 117 ntBASIC0.76□□□□□ -2.29
CLDN3O15551 AL591926.4-201ENST00000616895 298 ntBASIC0.76□□□□□ -2.29
CLDN3O15551 MIR103A2-201ENST00000362154 78 ntBASIC0.75□□□□□ -2.29
CLDN3O15551 MIR508-201ENST00000384857 115 ntBASIC0.75□□□□□ -2.29
CLDN3O15551 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.75□□□□□ -2.29
CLDN3O15551 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.75□□□□□ -2.29
CLDN3O15551 AC006461.1-201ENST00000412637 326 ntBASIC0.75□□□□□ -2.29
CLDN3O15551 AC093019.1-201ENST00000443135 252 ntBASIC0.75□□□□□ -2.29
CLDN3O15551 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.75□□□□□ -2.29
CLDN3O15551 AC007014.2-201ENST00000615581 479 ntBASIC0.75□□□□□ -2.29
CLDN3O15551 AC023934.1-201ENST00000574529 2389 ntBASIC0.74□□□□□ -2.29
CLDN3O15551 SNORA25.3-201ENST00000363205 127 ntBASIC0.74□□□□□ -2.29
CLDN3O15551 SNORD115-30-201ENST00000364117 82 ntBASIC0.74□□□□□ -2.29
CLDN3O15551 RNU6-99P-201ENST00000364721 107 ntBASIC0.74□□□□□ -2.29
CLDN3O15551 RNU6-926P-201ENST00000384075 107 ntBASIC0.74□□□□□ -2.29
CLDN3O15551 RNU6-42P-201ENST00000384165 107 ntBASIC0.74□□□□□ -2.29
CLDN3O15551 MIR520C-201ENST00000385005 87 ntBASIC0.74□□□□□ -2.29
CLDN3O15551 MLLT10P1-201ENST00000418346 262 ntBASIC0.74□□□□□ -2.29
CLDN3O15551 RPS26P5-201ENST00000418544 335 ntBASIC0.74□□□□□ -2.29
CLDN3O15551 AC117454.1-201ENST00000491120 168 ntBASIC0.74□□□□□ -2.29
CLDN3O15551 AC116353.2-201ENST00000505332 712 ntBASIC0.74□□□□□ -2.29
CLDN3O15551 AC011352.1-201ENST00000512300 793 ntBASIC0.74□□□□□ -2.29
CLDN3O15551 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.74□□□□□ -2.29
CLDN3O15551 MIR2355-201ENST00000517199 87 ntBASIC0.74□□□□□ -2.29
CLDN3O15551 AC023827.1-201ENST00000569247 97 ntBASIC0.74□□□□□ -2.29
CLDN3O15551 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.74□□□□□ -2.29
CLDN3O15551 AC093783.1-201ENST00000612976 329 ntBASIC0.74□□□□□ -2.29
CLDN3O15551 MIR6734-201ENST00000621166 68 ntBASIC0.74□□□□□ -2.29
CLDN3O15551 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.74□□□□□ -2.29
CLDN3O15551 Y_RNA.88-201ENST00000363029 99 ntBASIC0.73□□□□□ -2.29
CLDN3O15551 Y_RNA.361-201ENST00000365515 120 ntBASIC0.73□□□□□ -2.29
CLDN3O15551 MIR5000-201ENST00000577717 103 ntBASIC0.73□□□□□ -2.29
CLDN3O15551 RNU6-1084P-201ENST00000362498 107 ntBASIC0.72□□□□□ -2.29
CLDN3O15551 U8.5-201ENST00000364528 136 ntBASIC0.72□□□□□ -2.29
CLDN3O15551 MIR136-201ENST00000385207 82 ntBASIC0.72□□□□□ -2.29
CLDN3O15551 SNORA75.4-201ENST00000391278 119 ntBASIC0.72□□□□□ -2.29
CLDN3O15551 MTND5P15-201ENST00000434246 349 ntBASIC0.72□□□□□ -2.29
CLDN3O15551 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.72□□□□□ -2.29
CLDN3O15551 Y_RNA.673-201ENST00000516306 88 ntBASIC0.72□□□□□ -2.29
CLDN3O15551 RNU2-12P-201ENST00000517216 168 ntBASIC0.72□□□□□ -2.29
CLDN3O15551 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.72□□□□□ -2.29
CLDN3O15551 MIR4714-201ENST00000580728 77 ntBASIC0.72□□□□□ -2.29
CLDN3O15551 AC011712.1-201ENST00000588959 234 ntBASIC0.72□□□□□ -2.29
CLDN3O15551 AC104465.1-201ENST00000611365 139 ntBASIC0.72□□□□□ -2.29
CLDN3O15551 RMST_2.1-201ENST00000617263 136 ntBASIC0.72□□□□□ -2.29
CLDN3O15551 Y_RNA.6-201ENST00000362350 114 ntBASIC0.71□□□□□ -2.3
CLDN3O15551 Y_RNA.122-201ENST00000363331 96 ntBASIC0.71□□□□□ -2.3
CLDN3O15551 RNU6-961P-201ENST00000363893 105 ntBASIC0.71□□□□□ -2.3
CLDN3O15551 RNU6-324P-201ENST00000363957 106 ntBASIC0.71□□□□□ -2.3
CLDN3O15551 SNORD14.1-201ENST00000365609 90 ntBASIC0.71□□□□□ -2.3
CLDN3O15551 SNORA69.1-201ENST00000390904 137 ntBASIC0.71□□□□□ -2.3
CLDN3O15551 AL031003.1-201ENST00000404229 172 ntBASIC0.71□□□□□ -2.3
CLDN3O15551 MTND4P28-201ENST00000426217 387 ntBASIC0.71□□□□□ -2.3
CLDN3O15551 AL035398.1-201ENST00000430869 322 ntBASIC0.71□□□□□ -2.3
CLDN3O15551 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.71□□□□□ -2.3
CLDN3O15551 AC069439.1-201ENST00000494739 167 ntBASIC0.71□□□□□ -2.3
CLDN3O15551 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.71□□□□□ -2.3
CLDN3O15551 SNORA18.7-201ENST00000516910 131 ntBASIC0.71□□□□□ -2.3
CLDN3O15551 AC004812.1-201ENST00000540773 146 ntBASIC0.71□□□□□ -2.3
CLDN3O15551 AL353765.1-201ENST00000605514 183 ntBASIC0.71□□□□□ -2.3
CLDN3O15551 SEPT14P17-201ENST00000617978 177 ntBASIC0.71□□□□□ -2.3
CLDN3O15551 AC073869.6-201ENST00000640656 341 ntBASIC0.71□□□□□ -2.3
CLDN3O15551 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
CLDN3O15551 Y_RNA.72-201ENST00000362894 103 ntBASIC0.7□□□□□ -2.3
CLDN3O15551 RNU4-40P-201ENST00000364351 143 ntBASIC0.7□□□□□ -2.3
CLDN3O15551 RNU6-1297P-201ENST00000384415 104 ntBASIC0.7□□□□□ -2.3
CLDN3O15551 MIR625-201ENST00000385047 85 ntBASIC0.7□□□□□ -2.3
CLDN3O15551 AL390729.2-201ENST00000416137 156 ntBASIC0.7□□□□□ -2.3
CLDN3O15551 MRPS18CP6-201ENST00000423587 223 ntBASIC0.7□□□□□ -2.3
CLDN3O15551 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.7□□□□□ -2.3
CLDN3O15551 RNU7-41P-201ENST00000515917 61 ntBASIC0.7□□□□□ -2.3
CLDN3O15551 SNORA74.3-201ENST00000517108 154 ntBASIC0.7□□□□□ -2.3
CLDN3O15551 AC109810.1-201ENST00000534066 224 ntBASIC0.7□□□□□ -2.3
CLDN3O15551 AC131055.1-201ENST00000584626 316 ntBASIC0.7□□□□□ -2.3
CLDN3O15551 MIR4762-201ENST00000585261 75 ntBASIC0.7□□□□□ -2.3
CLDN3O15551 Y_RNA.253-201ENST00000364562 112 ntBASIC0.69□□□□□ -2.3
CLDN3O15551 Y_RNA.355-201ENST00000365462 98 ntBASIC0.69□□□□□ -2.3
CLDN3O15551 SNORD89-201ENST00000390981 114 ntBASIC0.69□□□□□ -2.3
CLDN3O15551 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.69□□□□□ -2.3
CLDN3O15551 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.69□□□□□ -2.3
CLDN3O15551 MTND1P34-201ENST00000438556 671 ntBASIC0.69□□□□□ -2.3
CLDN3O15551 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.69□□□□□ -2.3
CLDN3O15551 RNU6-358P-201ENST00000516564 75 ntBASIC0.69□□□□□ -2.3
CLDN3O15551 RNU6-1213P-201ENST00000517075 94 ntBASIC0.69□□□□□ -2.3
CLDN3O15551 AC055872.1-201ENST00000570978 278 ntBASIC0.69□□□□□ -2.3
CLDN3O15551 AL669831.3-213ENST00000636676 183 ntBASIC0.69□□□□□ -2.3
CLDN3O15551 Y_RNA.269-201ENST00000364685 89 ntBASIC0.68□□□□□ -2.3
CLDN3O15551 RNU6-1335P-201ENST00000365426 107 ntBASIC0.68□□□□□ -2.3
CLDN3O15551 MIR15B-201ENST00000385045 98 ntBASIC0.68□□□□□ -2.3
CLDN3O15551 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.68□□□□□ -2.3
CLDN3O15551 FCF1P4-201ENST00000448326 183 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 157.9 ms