Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 Y_RNA.361-201ENST00000365515 120 ntBASIC0.71□□□□□ -2.3
CCL21O00585 SNORD116-13-201ENST00000384408 92 ntBASIC0.71□□□□□ -2.3
CCL21O00585 MIR942-201ENST00000401111 86 ntBASIC0.71□□□□□ -2.3
CCL21O00585 RNA5SP511-201ENST00000410487 115 ntBASIC0.71□□□□□ -2.3
CCL21O00585 AL354751.2-201ENST00000415471 210 ntBASIC0.71□□□□□ -2.3
CCL21O00585 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.71□□□□□ -2.3
CCL21O00585 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.71□□□□□ -2.3
CCL21O00585 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.71□□□□□ -2.3
CCL21O00585 snoU13.25-201ENST00000458945 104 ntBASIC0.71□□□□□ -2.3
CCL21O00585 RPL17P19-201ENST00000489069 552 ntBASIC0.71□□□□□ -2.3
CCL21O00585 RNU6-197P-201ENST00000516680 100 ntBASIC0.71□□□□□ -2.3
CCL21O00585 RNU6-307P-201ENST00000516743 106 ntBASIC0.71□□□□□ -2.3
CCL21O00585 MIR2355-201ENST00000517199 87 ntBASIC0.71□□□□□ -2.3
CCL21O00585 AC090142.3-201ENST00000519012 385 ntBASIC0.71□□□□□ -2.3
CCL21O00585 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.71□□□□□ -2.3
CCL21O00585 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.71□□□□□ -2.3
CCL21O00585 MIR1244-1-201ENST00000612829 85 ntBASIC0.71□□□□□ -2.3
CCL21O00585 AL008636.1-201ENST00000625038 1018 ntBASIC0.71□□□□□ -2.3
CCL21O00585 MIR1244-3-201ENST00000635744 85 ntBASIC0.71□□□□□ -2.3
CCL21O00585 MIR1244-2-201ENST00000636449 85 ntBASIC0.71□□□□□ -2.3
CCL21O00585 MIR1244-4-202ENST00000636813 85 ntBASIC0.71□□□□□ -2.3
CCL21O00585 MIR6866-201ENST00000638146 69 ntBASIC0.71□□□□□ -2.3
CCL21O00585 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
CCL21O00585 Y_RNA.88-201ENST00000363029 99 ntBASIC0.7□□□□□ -2.3
CCL21O00585 SNORD68-201ENST00000363214 84 ntBASIC0.7□□□□□ -2.3
CCL21O00585 RNU2-64P-201ENST00000411315 191 ntBASIC0.7□□□□□ -2.3
CCL21O00585 PIGPP3-201ENST00000425307 415 ntBASIC0.7□□□□□ -2.3
CCL21O00585 RPL23AP50-201ENST00000434149 455 ntBASIC0.7□□□□□ -2.3
CCL21O00585 AL162725.1-201ENST00000435405 301 ntBASIC0.7□□□□□ -2.3
CCL21O00585 AC116353.2-201ENST00000505332 712 ntBASIC0.7□□□□□ -2.3
CCL21O00585 AC011352.1-201ENST00000512300 793 ntBASIC0.7□□□□□ -2.3
CCL21O00585 RNU6-408P-201ENST00000515910 100 ntBASIC0.7□□□□□ -2.3
CCL21O00585 MIR3192-201ENST00000584920 77 ntBASIC0.7□□□□□ -2.3
CCL21O00585 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.7□□□□□ -2.3
CCL21O00585 AC093783.1-201ENST00000612976 329 ntBASIC0.7□□□□□ -2.3
CCL21O00585 AC007742.2-201ENST00000618226 398 ntBASIC0.7□□□□□ -2.3
CCL21O00585 CASC19-280ENST00000642102 1351 ntBASIC0.7□□□□□ -2.3
CCL21O00585 Y_RNA.6-201ENST00000362350 114 ntBASIC0.69□□□□□ -2.3
CCL21O00585 SNORD114-2-201ENST00000363953 78 ntBASIC0.69□□□□□ -2.3
CCL21O00585 SNORD115-30-201ENST00000364117 82 ntBASIC0.69□□□□□ -2.3
CCL21O00585 MIR608-201ENST00000384820 100 ntBASIC0.69□□□□□ -2.3
CCL21O00585 MIR508-201ENST00000384857 115 ntBASIC0.69□□□□□ -2.3
CCL21O00585 MIR625-201ENST00000385047 85 ntBASIC0.69□□□□□ -2.3
CCL21O00585 Y_RNA.621-201ENST00000411065 96 ntBASIC0.69□□□□□ -2.3
CCL21O00585 RPS3AP1-201ENST00000413190 320 ntBASIC0.69□□□□□ -2.3
CCL21O00585 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.69□□□□□ -2.3
CCL21O00585 MIR2053-201ENST00000459295 91 ntBASIC0.69□□□□□ -2.3
CCL21O00585 AC114811.1-201ENST00000507207 168 ntBASIC0.69□□□□□ -2.3
CCL21O00585 PSMC1P5-201ENST00000512850 177 ntBASIC0.69□□□□□ -2.3
CCL21O00585 SNORA70.12-201ENST00000516084 153 ntBASIC0.69□□□□□ -2.3
CCL21O00585 RNU6-1337P-201ENST00000516525 95 ntBASIC0.69□□□□□ -2.3
CCL21O00585 RNU2-12P-201ENST00000517216 168 ntBASIC0.69□□□□□ -2.3
CCL21O00585 AC023442.1-201ENST00000531247 422 ntBASIC0.69□□□□□ -2.3
CCL21O00585 MIR1273G-201ENST00000577677 100 ntBASIC0.69□□□□□ -2.3
CCL21O00585 AL590095.2-201ENST00000604136 117 ntBASIC0.69□□□□□ -2.3
CCL21O00585 AC007014.2-201ENST00000615581 479 ntBASIC0.69□□□□□ -2.3
CCL21O00585 AC004467.1-201ENST00000615678 330 ntBASIC0.69□□□□□ -2.3
CCL21O00585 RNU6-99P-201ENST00000364721 107 ntBASIC0.68□□□□□ -2.3
CCL21O00585 MIR452-201ENST00000385020 85 ntBASIC0.68□□□□□ -2.3
CCL21O00585 SNORA75.4-201ENST00000391278 119 ntBASIC0.68□□□□□ -2.3
CCL21O00585 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.68□□□□□ -2.3
CCL21O00585 RPEP5-201ENST00000441137 268 ntBASIC0.68□□□□□ -2.3
CCL21O00585 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.68□□□□□ -2.3
CCL21O00585 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.68□□□□□ -2.3
CCL21O00585 AL591926.4-201ENST00000616895 298 ntBASIC0.68□□□□□ -2.3
CCL21O00585 AL442644.1-201ENST00000454390 3105 ntBASIC0.68□□□□□ -2.3
CCL21O00585 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CCL21O00585 Y_RNA.72-201ENST00000362894 103 ntBASIC0.67□□□□□ -2.3
CCL21O00585 SNORD114-23-201ENST00000363536 72 ntBASIC0.67□□□□□ -2.3
CCL21O00585 U8.5-201ENST00000364528 136 ntBASIC0.67□□□□□ -2.3
CCL21O00585 MIR936-201ENST00000401264 98 ntBASIC0.67□□□□□ -2.3
CCL21O00585 MIR1298-201ENST00000408783 112 ntBASIC0.67□□□□□ -2.3
CCL21O00585 AC006461.1-201ENST00000412637 326 ntBASIC0.67□□□□□ -2.3
CCL21O00585 AC093019.1-201ENST00000443135 252 ntBASIC0.67□□□□□ -2.3
CCL21O00585 RPS20P10-201ENST00000451209 253 ntBASIC0.67□□□□□ -2.3
CCL21O00585 AC069439.1-201ENST00000494739 167 ntBASIC0.67□□□□□ -2.3
CCL21O00585 RNA5SP255-201ENST00000516370 107 ntBASIC0.67□□□□□ -2.3
CCL21O00585 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.67□□□□□ -2.3
CCL21O00585 MIR4653-201ENST00000585107 83 ntBASIC0.67□□□□□ -2.3
CCL21O00585 MIR4762-201ENST00000585261 75 ntBASIC0.67□□□□□ -2.3
CCL21O00585 AC060780.3-201ENST00000589464 80 ntBASIC0.67□□□□□ -2.3
CCL21O00585 AC073869.6-201ENST00000640656 341 ntBASIC0.67□□□□□ -2.3
CCL21O00585 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
CCL21O00585 RNA5SP264-201ENST00000363115 107 ntBASIC0.66□□□□□ -2.3
CCL21O00585 RNU6-961P-201ENST00000363893 105 ntBASIC0.66□□□□□ -2.3
CCL21O00585 RNU4-40P-201ENST00000364351 143 ntBASIC0.66□□□□□ -2.3
CCL21O00585 Y_RNA.374-201ENST00000365606 101 ntBASIC0.66□□□□□ -2.3
CCL21O00585 MTND4P28-201ENST00000426217 387 ntBASIC0.66□□□□□ -2.3
CCL21O00585 MTND1P34-201ENST00000438556 671 ntBASIC0.66□□□□□ -2.3
CCL21O00585 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.66□□□□□ -2.3
CCL21O00585 RNU6-351P-201ENST00000516097 100 ntBASIC0.66□□□□□ -2.3
CCL21O00585 RNU6-358P-201ENST00000516564 75 ntBASIC0.66□□□□□ -2.3
CCL21O00585 AC136628.3-201ENST00000521868 290 ntBASIC0.66□□□□□ -2.3
CCL21O00585 AC055872.1-201ENST00000570978 278 ntBASIC0.66□□□□□ -2.3
CCL21O00585 AC006380.1-201ENST00000603598 186 ntBASIC0.66□□□□□ -2.3
CCL21O00585 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.66□□□□□ -2.3
CCL21O00585 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
CCL21O00585 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CCL21O00585 MIR100-201ENST00000385259 80 ntBASIC0.65□□□□□ -2.31
CCL21O00585 SNORA69.1-201ENST00000390904 137 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms