Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 CASC19-280ENST00000642102 1351 ntBASIC0.91□□□□□ -2.26
DDX39AO00148 SNORD114-2-201ENST00000363953 78 ntBASIC0.9□□□□□ -2.27
DDX39AO00148 Y_RNA.361-201ENST00000365515 120 ntBASIC0.9□□□□□ -2.27
DDX39AO00148 RNU6-42P-201ENST00000384165 107 ntBASIC0.9□□□□□ -2.27
DDX39AO00148 SNORA75.4-201ENST00000391278 119 ntBASIC0.9□□□□□ -2.27
DDX39AO00148 RNA5SP511-201ENST00000410487 115 ntBASIC0.9□□□□□ -2.27
DDX39AO00148 RPS4XP11-201ENST00000446897 772 ntBASIC0.9□□□□□ -2.27
DDX39AO00148 AC114811.1-201ENST00000507207 168 ntBASIC0.9□□□□□ -2.27
DDX39AO00148 RNU6-1337P-201ENST00000516525 95 ntBASIC0.9□□□□□ -2.27
DDX39AO00148 RNU2-12P-201ENST00000517216 168 ntBASIC0.9□□□□□ -2.27
DDX39AO00148 CYP3A137P-201ENST00000562436 69 ntBASIC0.9□□□□□ -2.27
DDX39AO00148 AC006380.1-201ENST00000603598 186 ntBASIC0.9□□□□□ -2.27
DDX39AO00148 PRELID3BP2-201ENST00000605362 201 ntBASIC0.9□□□□□ -2.27
DDX39AO00148 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.9□□□□□ -2.27
DDX39AO00148 AL008636.1-201ENST00000625038 1018 ntBASIC0.9□□□□□ -2.27
DDX39AO00148 RNU6-99P-201ENST00000364721 107 ntBASIC0.89□□□□□ -2.27
DDX39AO00148 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
DDX39AO00148 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.89□□□□□ -2.27
DDX39AO00148 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.89□□□□□ -2.27
DDX39AO00148 RPEP5-201ENST00000441137 268 ntBASIC0.89□□□□□ -2.27
DDX39AO00148 FGF7P6-202ENST00000451282 293 ntBASIC0.89□□□□□ -2.27
DDX39AO00148 PSMC1P5-201ENST00000512850 177 ntBASIC0.89□□□□□ -2.27
DDX39AO00148 RNU7-30P-201ENST00000516835 62 ntBASIC0.89□□□□□ -2.27
DDX39AO00148 AC004467.1-201ENST00000615678 330 ntBASIC0.89□□□□□ -2.27
DDX39AO00148 U8.5-201ENST00000364528 136 ntBASIC0.88□□□□□ -2.27
DDX39AO00148 RNU6-767P-201ENST00000384132 107 ntBASIC0.88□□□□□ -2.27
DDX39AO00148 MIR608-201ENST00000384820 100 ntBASIC0.88□□□□□ -2.27
DDX39AO00148 MIR625-201ENST00000385047 85 ntBASIC0.88□□□□□ -2.27
DDX39AO00148 MTND4P28-201ENST00000426217 387 ntBASIC0.88□□□□□ -2.27
DDX39AO00148 RPS20P10-201ENST00000451209 253 ntBASIC0.88□□□□□ -2.27
DDX39AO00148 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.88□□□□□ -2.27
DDX39AO00148 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.88□□□□□ -2.27
DDX39AO00148 RNU6-1213P-201ENST00000517075 94 ntBASIC0.88□□□□□ -2.27
DDX39AO00148 RNU6-1223P-201ENST00000517124 104 ntBASIC0.88□□□□□ -2.27
DDX39AO00148 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.88□□□□□ -2.27
DDX39AO00148 AC013244.2-201ENST00000603396 103 ntBASIC0.88□□□□□ -2.27
DDX39AO00148 AC108706.1-201ENST00000611053 297 ntBASIC0.88□□□□□ -2.27
DDX39AO00148 AL591926.4-201ENST00000616895 298 ntBASIC0.88□□□□□ -2.27
DDX39AO00148 AC139792.2-201ENST00000624218 587 ntBASIC0.88□□□□□ -2.27
DDX39AO00148 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.88□□□□□ -2.27
DDX39AO00148 SNORA69.1-201ENST00000390904 137 ntBASIC0.87□□□□□ -2.27
DDX39AO00148 FABP5P4-201ENST00000437203 171 ntBASIC0.87□□□□□ -2.27
DDX39AO00148 AC093019.1-201ENST00000443135 252 ntBASIC0.87□□□□□ -2.27
DDX39AO00148 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.87□□□□□ -2.27
DDX39AO00148 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.87□□□□□ -2.27
DDX39AO00148 MIR3192-201ENST00000584920 77 ntBASIC0.87□□□□□ -2.27
DDX39AO00148 AL669831.3-213ENST00000636676 183 ntBASIC0.87□□□□□ -2.27
DDX39AO00148 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
DDX39AO00148 RNU6-961P-201ENST00000363893 105 ntBASIC0.86□□□□□ -2.27
DDX39AO00148 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
DDX39AO00148 AL031003.1-201ENST00000404229 172 ntBASIC0.86□□□□□ -2.27
DDX39AO00148 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.86□□□□□ -2.27
DDX39AO00148 MIR1298-201ENST00000408783 112 ntBASIC0.86□□□□□ -2.27
DDX39AO00148 RNU4-14P-201ENST00000410858 122 ntBASIC0.86□□□□□ -2.27
DDX39AO00148 MTND4P17-201ENST00000470444 350 ntBASIC0.86□□□□□ -2.27
DDX39AO00148 RNU6-351P-201ENST00000516097 100 ntBASIC0.86□□□□□ -2.27
DDX39AO00148 RNA5SP255-201ENST00000516370 107 ntBASIC0.86□□□□□ -2.27
DDX39AO00148 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.86□□□□□ -2.27
DDX39AO00148 MIR4762-201ENST00000585261 75 ntBASIC0.86□□□□□ -2.27
DDX39AO00148 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
DDX39AO00148 MIR103A2-201ENST00000362154 78 ntBASIC0.85□□□□□ -2.27
DDX39AO00148 RNU6-845P-201ENST00000362578 103 ntBASIC0.85□□□□□ -2.27
DDX39AO00148 RNA5SP264-201ENST00000363115 107 ntBASIC0.85□□□□□ -2.27
DDX39AO00148 Y_RNA.279-201ENST00000364763 95 ntBASIC0.85□□□□□ -2.27
DDX39AO00148 RNU6-926P-201ENST00000384075 107 ntBASIC0.85□□□□□ -2.27
DDX39AO00148 Y_RNA.577-201ENST00000384794 101 ntBASIC0.85□□□□□ -2.27
DDX39AO00148 MIR15B-201ENST00000385045 98 ntBASIC0.85□□□□□ -2.27
DDX39AO00148 RNU6-192P-201ENST00000391253 100 ntBASIC0.85□□□□□ -2.27
DDX39AO00148 MRPS18CP6-201ENST00000423587 223 ntBASIC0.85□□□□□ -2.27
DDX39AO00148 FCF1P4-201ENST00000448326 183 ntBASIC0.85□□□□□ -2.27
DDX39AO00148 snoU13.25-201ENST00000458945 104 ntBASIC0.85□□□□□ -2.27
DDX39AO00148 Y_RNA.691-201ENST00000516611 103 ntBASIC0.85□□□□□ -2.27
DDX39AO00148 RNU6-264P-201ENST00000517134 104 ntBASIC0.85□□□□□ -2.27
DDX39AO00148 AC022616.4-201ENST00000522985 181 ntBASIC0.85□□□□□ -2.27
DDX39AO00148 MIR4714-201ENST00000580728 77 ntBASIC0.85□□□□□ -2.27
DDX39AO00148 AC022709.1-201ENST00000615967 87 ntBASIC0.85□□□□□ -2.27
DDX39AO00148 MIR6866-201ENST00000638146 69 ntBASIC0.85□□□□□ -2.27
DDX39AO00148 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.84□□□□□ -2.27
DDX39AO00148 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
DDX39AO00148 Y_RNA.160-201ENST00000363677 92 ntBASIC0.84□□□□□ -2.27
DDX39AO00148 Y_RNA.166-201ENST00000363730 102 ntBASIC0.84□□□□□ -2.27
DDX39AO00148 Y_RNA.330-201ENST00000365230 109 ntBASIC0.84□□□□□ -2.27
DDX39AO00148 MIR489-201ENST00000384923 84 ntBASIC0.84□□□□□ -2.27
DDX39AO00148 MIR516B2-201ENST00000385190 85 ntBASIC0.84□□□□□ -2.27
DDX39AO00148 Y_RNA.592-201ENST00000410274 109 ntBASIC0.84□□□□□ -2.27
DDX39AO00148 AC004941.2-201ENST00000427009 228 ntBASIC0.84□□□□□ -2.27
DDX39AO00148 RNA5SP436-201ENST00000516020 115 ntBASIC0.84□□□□□ -2.27
DDX39AO00148 RNU6-120P-201ENST00000516077 103 ntBASIC0.84□□□□□ -2.27
DDX39AO00148 MTND4LP26-201ENST00000518144 282 ntBASIC0.84□□□□□ -2.27
DDX39AO00148 AC136628.3-201ENST00000521868 290 ntBASIC0.84□□□□□ -2.27
DDX39AO00148 MIR7111-201ENST00000619751 72 ntBASIC0.84□□□□□ -2.27
DDX39AO00148 MIR6835-201ENST00000621552 64 ntBASIC0.84□□□□□ -2.27
DDX39AO00148 MIR508-201ENST00000384857 115 ntBASIC0.83□□□□□ -2.28
DDX39AO00148 MIR136-201ENST00000385207 82 ntBASIC0.83□□□□□ -2.28
DDX39AO00148 MIR100-201ENST00000385259 80 ntBASIC0.83□□□□□ -2.28
DDX39AO00148 RNU2-54P-201ENST00000410299 190 ntBASIC0.83□□□□□ -2.28
DDX39AO00148 PDCL2P1-201ENST00000419302 352 ntBASIC0.83□□□□□ -2.28
DDX39AO00148 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.83□□□□□ -2.28
DDX39AO00148 Y_RNA.635-201ENST00000459041 101 ntBASIC0.83□□□□□ -2.28
DDX39AO00148 AC117454.1-201ENST00000491120 168 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms