Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 TIMM9P2-201ENST00000419324 266 ntBASIC-0.4□□□□□ -2.47
HSPG2P98160 SNRPGP14-201ENST00000435400 219 ntBASIC-0.4□□□□□ -2.47
HSPG2P98160 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.4□□□□□ -2.47
HSPG2P98160 MTND1P8-201ENST00000571424 950 ntBASIC-0.4□□□□□ -2.47
HSPG2P98160 MIR548AR-201ENST00000582191 57 ntBASIC-0.4□□□□□ -2.47
HSPG2P98160 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-0.4□□□□□ -2.47
HSPG2P98160 AC139792.3-201ENST00000623525 224 ntBASIC-0.4□□□□□ -2.47
HSPG2P98160 AL162376.1-201ENST00000624117 175 ntBASIC-0.4□□□□□ -2.47
HSPG2P98160 RPL23AP30-201ENST00000432419 501 ntBASIC-0.4□□□□□ -2.47
HSPG2P98160 SEPT14P24-201ENST00000447236 180 ntBASIC-0.4□□□□□ -2.47
HSPG2P98160 SNRPGP7-201ENST00000469016 106 ntBASIC-0.4□□□□□ -2.47
HSPG2P98160 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.4□□□□□ -2.47
HSPG2P98160 AC090617.3-201ENST00000573670 475 ntBASIC-0.4□□□□□ -2.47
HSPG2P98160 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.4□□□□□ -2.47
HSPG2P98160 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.41□□□□□ -2.47
HSPG2P98160 RNU6-502P-201ENST00000362419 108 ntBASIC-0.41□□□□□ -2.47
HSPG2P98160 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.41□□□□□ -2.47
HSPG2P98160 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.41□□□□□ -2.47
HSPG2P98160 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.41□□□□□ -2.47
HSPG2P98160 AL049829.1-201ENST00000465411 156 ntBASIC-0.41□□□□□ -2.47
HSPG2P98160 SNORA31.14-201ENST00000516728 116 ntBASIC-0.41□□□□□ -2.47
HSPG2P98160 RNU6-323P-201ENST00000521915 107 ntBASIC-0.41□□□□□ -2.47
HSPG2P98160 AC108747.1-201ENST00000609508 535 ntBASIC-0.41□□□□□ -2.47
HSPG2P98160 uc_338.4-201ENST00000616635 176 ntBASIC-0.41□□□□□ -2.47
HSPG2P98160 SNORD45.3-201ENST00000363836 72 ntBASIC-0.41□□□□□ -2.47
HSPG2P98160 RNU6-384P-201ENST00000364900 104 ntBASIC-0.41□□□□□ -2.47
HSPG2P98160 SNORD28B-201ENST00000390993 75 ntBASIC-0.41□□□□□ -2.47
HSPG2P98160 MIR320C1-201ENST00000408566 88 ntBASIC-0.41□□□□□ -2.47
HSPG2P98160 RPL39P25-201ENST00000449384 154 ntBASIC-0.41□□□□□ -2.47
HSPG2P98160 AL138752.1-201ENST00000452964 351 ntBASIC-0.41□□□□□ -2.47
HSPG2P98160 AC090517.1-201ENST00000569307 266 ntBASIC-0.41□□□□□ -2.47
HSPG2P98160 MIR4791-201ENST00000607666 84 ntBASIC-0.41□□□□□ -2.47
HSPG2P98160 AF250324.2-201ENST00000608299 610 ntBASIC-0.41□□□□□ -2.47
HSPG2P98160 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.41□□□□□ -2.47
HSPG2P98160 AC099786.3-201ENST00000565735 1410 ntBASIC-0.41□□□□□ -2.47
HSPG2P98160 MTND4P9-201ENST00000507819 1346 ntBASIC-0.41□□□□□ -2.47
HSPG2P98160 AC073343.1-201ENST00000328239 651 ntBASIC-0.41□□□□□ -2.48
HSPG2P98160 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.41□□□□□ -2.48
HSPG2P98160 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.41□□□□□ -2.48
HSPG2P98160 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.41□□□□□ -2.48
HSPG2P98160 MIR320B2-201ENST00000408479 138 ntBASIC-0.41□□□□□ -2.48
HSPG2P98160 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.41□□□□□ -2.48
HSPG2P98160 snoU13.2-201ENST00000459201 104 ntBASIC-0.41□□□□□ -2.48
HSPG2P98160 AC010486.3-201ENST00000511602 785 ntBASIC-0.41□□□□□ -2.48
HSPG2P98160 RNA5SP47-201ENST00000517230 109 ntBASIC-0.41□□□□□ -2.48
HSPG2P98160 AL139418.1-201ENST00000613613 177 ntBASIC-0.41□□□□□ -2.48
HSPG2P98160 MIR1264-201ENST00000616374 69 ntBASIC-0.41□□□□□ -2.48
HSPG2P98160 AL078596.1-201ENST00000624856 447 ntBASIC-0.41□□□□□ -2.48
HSPG2P98160 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.41□□□□□ -2.48
HSPG2P98160 MT-TF-201ENST00000387314 71 ntBASIC-0.41□□□□□ -2.48
HSPG2P98160 AC018865.2-201ENST00000423631 129 ntBASIC-0.41□□□□□ -2.48
HSPG2P98160 AC091133.4-201ENST00000511142 308 ntBASIC-0.41□□□□□ -2.48
HSPG2P98160 SNORD45.4-201ENST00000516629 73 ntBASIC-0.41□□□□□ -2.48
HSPG2P98160 AL355375.2-201ENST00000574825 175 ntBASIC-0.41□□□□□ -2.48
HSPG2P98160 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-0.41□□□□□ -2.48
HSPG2P98160 AC023158.2-201ENST00000614876 543 ntBASIC-0.41□□□□□ -2.48
HSPG2P98160 uc_338.19-201ENST00000616808 99 ntBASIC-0.41□□□□□ -2.48
HSPG2P98160 AC091948.2-201ENST00000636510 279 ntBASIC-0.41□□□□□ -2.48
HSPG2P98160 AC103706.2-201ENST00000638080 240 ntBASIC-0.41□□□□□ -2.48
HSPG2P98160 SNORD114-25-201ENST00000363742 72 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 CALM2P2-201ENST00000428512 440 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-0.42□□□□□ -2.48
HSPG2P98160 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.42□□□□□ -2.48
HSPG2P98160 AC091965.4-201ENST00000607691 587 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 AC097478.2-201ENST00000610572 514 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 Z97988.1-201ENST00000637697 135 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.42□□□□□ -2.48
HSPG2P98160 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.42□□□□□ -2.48
HSPG2P98160 RNU6-236P-201ENST00000363886 106 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 RNU6-125P-201ENST00000384505 107 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 SUMO1P2-201ENST00000452524 304 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 AC079140.5-201ENST00000507882 310 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.42□□□□□ -2.48
HSPG2P98160 AC005776.1-201ENST00000603164 290 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 AC092574.1-201ENST00000609771 420 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 AC008873.1-201ENST00000625051 138 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 SNORA43.4-201ENST00000629559 138 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 MIR4251-201ENST00000635819 61 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 RNU6-190P-201ENST00000384154 102 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 SNORA75.4-201ENST00000391278 119 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 AC068587.5-201ENST00000528506 175 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 MIR3912-201ENST00000577566 105 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-0.42□□□□□ -2.48
HSPG2P98160 AC069431.2-201ENST00000604149 1099 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 AP000942.4-201ENST00000604811 241 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 AC013437.2-201ENST00000639587 677 ntBASIC-0.42□□□□□ -2.48
HSPG2P98160 RNU5B-1-201ENST00000363286 116 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 RNU6-777P-201ENST00000364265 104 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 AL590623.1-201ENST00000427864 105 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 MTCO2P11-201ENST00000431069 680 ntBASIC-0.43□□□□□ -2.48
HSPG2P98160 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.43□□□□□ -2.48
HSPG2P98160 AC109479.2-201ENST00000517842 174 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms