Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 Y_RNA.124-201ENST00000363339 93 ntBASIC1.21□□□□□ -2.22
BDNFP23560 RNU6-192P-201ENST00000391253 100 ntBASIC1.21□□□□□ -2.22
BDNFP23560 RNA5SP247-201ENST00000411181 105 ntBASIC1.21□□□□□ -2.22
BDNFP23560 AC015922.2-201ENST00000435593 184 ntBASIC1.21□□□□□ -2.22
BDNFP23560 COX6CP14-201ENST00000469580 174 ntBASIC1.21□□□□□ -2.22
BDNFP23560 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.21□□□□□ -2.22
BDNFP23560 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.21□□□□□ -2.22
BDNFP23560 PRDX4P1-201ENST00000507189 574 ntBASIC1.21□□□□□ -2.22
BDNFP23560 SNORD111.1-201ENST00000516421 86 ntBASIC1.21□□□□□ -2.22
BDNFP23560 Y_RNA.691-201ENST00000516611 103 ntBASIC1.21□□□□□ -2.22
BDNFP23560 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.21□□□□□ -2.22
BDNFP23560 AC080078.2-201ENST00000603766 501 ntBASIC1.21□□□□□ -2.22
BDNFP23560 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.21□□□□□ -2.22
BDNFP23560 AC004832.4-201ENST00000608952 331 ntBASIC1.21□□□□□ -2.22
BDNFP23560 AC139792.2-201ENST00000624218 587 ntBASIC1.21□□□□□ -2.22
BDNFP23560 AC098679.4-201ENST00000624241 654 ntBASIC1.21□□□□□ -2.22
BDNFP23560 SNORD68-201ENST00000363214 84 ntBASIC1.2□□□□□ -2.22
BDNFP23560 Y_RNA.361-201ENST00000365515 120 ntBASIC1.2□□□□□ -2.22
BDNFP23560 AL354751.2-201ENST00000415471 210 ntBASIC1.2□□□□□ -2.22
BDNFP23560 MTND1P4-201ENST00000435196 415 ntBASIC1.2□□□□□ -2.22
BDNFP23560 AC002429.1-201ENST00000437672 148 ntBASIC1.2□□□□□ -2.22
BDNFP23560 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.2□□□□□ -2.22
BDNFP23560 AC069439.1-201ENST00000494739 167 ntBASIC1.2□□□□□ -2.22
BDNFP23560 Y_RNA.714-201ENST00000517065 90 ntBASIC1.2□□□□□ -2.22
BDNFP23560 RNU2-12P-201ENST00000517216 168 ntBASIC1.2□□□□□ -2.22
BDNFP23560 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.2□□□□□ -2.22
BDNFP23560 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.2□□□□□ -2.22
BDNFP23560 AC091812.1-201ENST00000432235 1948 ntBASIC1.19□□□□□ -2.22
BDNFP23560 Y_RNA.160-201ENST00000363677 92 ntBASIC1.19□□□□□ -2.22
BDNFP23560 SNORD115-30-201ENST00000364117 82 ntBASIC1.19□□□□□ -2.22
BDNFP23560 RNU6-136P-201ENST00000384663 107 ntBASIC1.19□□□□□ -2.22
BDNFP23560 SNORA75.6-201ENST00000391318 127 ntBASIC1.19□□□□□ -2.22
BDNFP23560 Y_RNA.592-201ENST00000410274 109 ntBASIC1.19□□□□□ -2.22
BDNFP23560 RNU6-1156P-201ENST00000410365 100 ntBASIC1.19□□□□□ -2.22
BDNFP23560 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.19□□□□□ -2.22
BDNFP23560 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.19□□□□□ -2.22
BDNFP23560 Z98949.2-201ENST00000440996 144 ntBASIC1.19□□□□□ -2.22
BDNFP23560 AC093019.1-201ENST00000443135 252 ntBASIC1.19□□□□□ -2.22
BDNFP23560 RNU7-90P-201ENST00000459216 62 ntBASIC1.19□□□□□ -2.22
BDNFP23560 RNA5SP102-201ENST00000516865 106 ntBASIC1.19□□□□□ -2.22
BDNFP23560 AC023442.1-201ENST00000531247 422 ntBASIC1.19□□□□□ -2.22
BDNFP23560 CASC19-280ENST00000642102 1351 ntBASIC1.19□□□□□ -2.22
BDNFP23560 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
BDNFP23560 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
BDNFP23560 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
BDNFP23560 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
BDNFP23560 SNORD78.2-201ENST00000391076 69 ntBASIC1.18□□□□□ -2.22
BDNFP23560 AC245047.8-201ENST00000456455 284 ntBASIC1.18□□□□□ -2.22
BDNFP23560 RNU6-1337P-201ENST00000516525 95 ntBASIC1.18□□□□□ -2.22
BDNFP23560 MIR4295-201ENST00000585286 85 ntBASIC1.18□□□□□ -2.22
BDNFP23560 U8.5-201ENST00000364528 136 ntBASIC1.17□□□□□ -2.22
BDNFP23560 Y_RNA.336-201ENST00000365307 109 ntBASIC1.17□□□□□ -2.22
BDNFP23560 RNY3P4-201ENST00000384428 101 ntBASIC1.17□□□□□ -2.22
BDNFP23560 MIR1276-201ENST00000408707 83 ntBASIC1.17□□□□□ -2.22
BDNFP23560 Y_RNA.605-201ENST00000410577 105 ntBASIC1.17□□□□□ -2.22
BDNFP23560 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.17□□□□□ -2.22
BDNFP23560 PDCD5P2-201ENST00000507570 312 ntBASIC1.17□□□□□ -2.22
BDNFP23560 RNU6-63P-201ENST00000516690 95 ntBASIC1.17□□□□□ -2.22
BDNFP23560 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.17□□□□□ -2.22
BDNFP23560 AC005176.2-201ENST00000596933 147 ntBASIC1.17□□□□□ -2.22
BDNFP23560 AC084782.3-201ENST00000612282 578 ntBASIC1.17□□□□□ -2.22
BDNFP23560 SNORD114-27-201ENST00000363766 70 ntBASIC1.16□□□□□ -2.22
BDNFP23560 Y_RNA.279-201ENST00000364763 95 ntBASIC1.16□□□□□ -2.22
BDNFP23560 SNORA25.9-201ENST00000365087 128 ntBASIC1.16□□□□□ -2.22
BDNFP23560 RNU1-36P-201ENST00000365130 165 ntBASIC1.16□□□□□ -2.22
BDNFP23560 MIR628-201ENST00000385229 95 ntBASIC1.16□□□□□ -2.22
BDNFP23560 RNU2-54P-201ENST00000410299 190 ntBASIC1.16□□□□□ -2.22
BDNFP23560 RNA5SP511-201ENST00000410487 115 ntBASIC1.16□□□□□ -2.22
BDNFP23560 RNU6-370P-201ENST00000411008 104 ntBASIC1.16□□□□□ -2.22
BDNFP23560 AC087343.1-201ENST00000477341 475 ntBASIC1.16□□□□□ -2.22
BDNFP23560 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.16□□□□□ -2.22
BDNFP23560 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.16□□□□□ -2.22
BDNFP23560 MIR96-201ENST00000362288 78 ntBASIC1.15□□□□□ -2.23
BDNFP23560 Y_RNA.226-201ENST00000364337 114 ntBASIC1.15□□□□□ -2.23
BDNFP23560 MIR942-201ENST00000401111 86 ntBASIC1.15□□□□□ -2.23
BDNFP23560 AL031003.1-201ENST00000404229 172 ntBASIC1.15□□□□□ -2.23
BDNFP23560 RNU2-64P-201ENST00000411315 191 ntBASIC1.15□□□□□ -2.23
BDNFP23560 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.15□□□□□ -2.23
BDNFP23560 RNU6-911P-201ENST00000516523 104 ntBASIC1.15□□□□□ -2.23
BDNFP23560 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.15□□□□□ -2.23
BDNFP23560 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.15□□□□□ -2.23
BDNFP23560 MIR4762-201ENST00000585261 75 ntBASIC1.15□□□□□ -2.23
BDNFP23560 TPTEP1-208ENST00000636884 213 ntBASIC1.15□□□□□ -2.23
BDNFP23560 SNORA22-201ENST00000383907 134 ntBASIC1.14□□□□□ -2.23
BDNFP23560 SNORD116-13-201ENST00000384408 92 ntBASIC1.14□□□□□ -2.23
BDNFP23560 SNORA22C-201ENST00000384614 134 ntBASIC1.14□□□□□ -2.23
BDNFP23560 MIR499A-201ENST00000384903 122 ntBASIC1.14□□□□□ -2.23
BDNFP23560 FABP5P4-201ENST00000437203 171 ntBASIC1.14□□□□□ -2.23
BDNFP23560 HMGN2P32-201ENST00000444648 269 ntBASIC1.14□□□□□ -2.23
BDNFP23560 RPS4XP11-201ENST00000446897 772 ntBASIC1.14□□□□□ -2.23
BDNFP23560 AC011604.1-201ENST00000545978 196 ntBASIC1.14□□□□□ -2.23
BDNFP23560 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.14□□□□□ -2.23
BDNFP23560 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.14□□□□□ -2.23
BDNFP23560 AC008163.1-202ENST00000636004 2889 ntBASIC1.14□□□□□ -2.23
BDNFP23560 RNU6-324P-201ENST00000363957 106 ntBASIC1.13□□□□□ -2.23
BDNFP23560 Y_RNA.230-201ENST00000364348 109 ntBASIC1.13□□□□□ -2.23
BDNFP23560 RNU6-1187P-201ENST00000364771 110 ntBASIC1.13□□□□□ -2.23
BDNFP23560 MIR136-201ENST00000385207 82 ntBASIC1.13□□□□□ -2.23
BDNFP23560 RNU6-876P-201ENST00000391295 104 ntBASIC1.13□□□□□ -2.23
BDNFP23560 RNU6-710P-201ENST00000410424 105 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms