Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 RNA5SP109-201ENST00000391010 116 ntBASIC1.15□□□□□ -2.23
MMP1P03956 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.15□□□□□ -2.23
MMP1P03956 MTCO2P27-201ENST00000420740 428 ntBASIC1.15□□□□□ -2.23
MMP1P03956 RNU6-625P-201ENST00000459412 107 ntBASIC1.15□□□□□ -2.23
MMP1P03956 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.15□□□□□ -2.23
MMP1P03956 AC211469.2-201ENST00000605461 205 ntBASIC1.15□□□□□ -2.23
MMP1P03956 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.15□□□□□ -2.23
MMP1P03956 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
MMP1P03956 MIR373-201ENST00000362273 69 ntBASIC1.14□□□□□ -2.23
MMP1P03956 Y_RNA.314-201ENST00000365114 102 ntBASIC1.14□□□□□ -2.23
MMP1P03956 Y_RNA.498-201ENST00000384460 102 ntBASIC1.14□□□□□ -2.23
MMP1P03956 Y_RNA.509-201ENST00000384506 99 ntBASIC1.14□□□□□ -2.23
MMP1P03956 SNORA12.1-201ENST00000390873 148 ntBASIC1.14□□□□□ -2.23
MMP1P03956 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.14□□□□□ -2.23
MMP1P03956 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.14□□□□□ -2.23
MMP1P03956 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.14□□□□□ -2.23
MMP1P03956 AC099799.1-201ENST00000439809 192 ntBASIC1.14□□□□□ -2.23
MMP1P03956 SNORA31.10-201ENST00000516482 106 ntBASIC1.14□□□□□ -2.23
MMP1P03956 AC027419.1-201ENST00000522976 328 ntBASIC1.14□□□□□ -2.23
MMP1P03956 AC023157.2-201ENST00000540596 141 ntBASIC1.14□□□□□ -2.23
MMP1P03956 AC005828.6-201ENST00000606610 232 ntBASIC1.14□□□□□ -2.23
MMP1P03956 AL359075.3-201ENST00000613288 217 ntBASIC1.14□□□□□ -2.23
MMP1P03956 U2.1-201ENST00000618978 145 ntBASIC1.14□□□□□ -2.23
MMP1P03956 MIR4272-201ENST00000635924 64 ntBASIC1.14□□□□□ -2.23
MMP1P03956 U6.115-201ENST00000636045 103 ntBASIC1.14□□□□□ -2.23
MMP1P03956 MIR3674-201ENST00000636576 68 ntBASIC1.14□□□□□ -2.23
MMP1P03956 Y_RNA.146-201ENST00000363549 102 ntBASIC1.13□□□□□ -2.23
MMP1P03956 RNU6-926P-201ENST00000384075 107 ntBASIC1.13□□□□□ -2.23
MMP1P03956 RNU6-939P-201ENST00000384634 107 ntBASIC1.13□□□□□ -2.23
MMP1P03956 Y_RNA.579-201ENST00000390939 94 ntBASIC1.13□□□□□ -2.23
MMP1P03956 RNU6-1186P-201ENST00000410429 97 ntBASIC1.13□□□□□ -2.23
MMP1P03956 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.13□□□□□ -2.23
MMP1P03956 MRPS10P1-201ENST00000448483 130 ntBASIC1.13□□□□□ -2.23
MMP1P03956 AC010469.2-201ENST00000496412 480 ntBASIC1.13□□□□□ -2.23
MMP1P03956 AC010598.1-201ENST00000510378 103 ntBASIC1.13□□□□□ -2.23
MMP1P03956 RNU6-408P-201ENST00000515910 100 ntBASIC1.13□□□□□ -2.23
MMP1P03956 RNU6-966P-201ENST00000516479 104 ntBASIC1.13□□□□□ -2.23
MMP1P03956 RNU6-1012P-201ENST00000516606 109 ntBASIC1.13□□□□□ -2.23
MMP1P03956 AC144568.1-201ENST00000520139 137 ntBASIC1.13□□□□□ -2.23
MMP1P03956 MIR4438-201ENST00000585271 93 ntBASIC1.13□□□□□ -2.23
MMP1P03956 C8orf59P2-201ENST00000603441 271 ntBASIC1.13□□□□□ -2.23
MMP1P03956 AC103810.9-201ENST00000606688 112 ntBASIC1.13□□□□□ -2.23
MMP1P03956 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.13□□□□□ -2.23
MMP1P03956 AC006435.5-201ENST00000624486 112 ntBASIC1.13□□□□□ -2.23
MMP1P03956 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
MMP1P03956 SNORA27.1-201ENST00000362604 124 ntBASIC1.12□□□□□ -2.23
MMP1P03956 Y_RNA.124-201ENST00000363339 93 ntBASIC1.12□□□□□ -2.23
MMP1P03956 Y_RNA.243-201ENST00000364481 109 ntBASIC1.12□□□□□ -2.23
MMP1P03956 Y_RNA.252-201ENST00000364556 101 ntBASIC1.12□□□□□ -2.23
MMP1P03956 Y_RNA.361-201ENST00000365515 120 ntBASIC1.12□□□□□ -2.23
MMP1P03956 MT-TD-201ENST00000387419 68 ntBASIC1.12□□□□□ -2.23
MMP1P03956 Y_RNA.605-201ENST00000410577 105 ntBASIC1.12□□□□□ -2.23
MMP1P03956 AC018865.2-201ENST00000423631 129 ntBASIC1.12□□□□□ -2.23
MMP1P03956 SNX2P2-201ENST00000424553 323 ntBASIC1.12□□□□□ -2.23
MMP1P03956 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.12□□□□□ -2.23
MMP1P03956 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.12□□□□□ -2.23
MMP1P03956 RNU7-34P-201ENST00000459394 64 ntBASIC1.12□□□□□ -2.23
MMP1P03956 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.12□□□□□ -2.23
MMP1P03956 RNU7-99P-201ENST00000516271 62 ntBASIC1.12□□□□□ -2.23
MMP1P03956 RNU6-911P-201ENST00000516523 104 ntBASIC1.12□□□□□ -2.23
MMP1P03956 RNU4-77P-201ENST00000516692 156 ntBASIC1.12□□□□□ -2.23
MMP1P03956 MIR5000-201ENST00000577717 103 ntBASIC1.12□□□□□ -2.23
MMP1P03956 AL390123.1-201ENST00000603216 237 ntBASIC1.12□□□□□ -2.23
MMP1P03956 AL133255.1-201ENST00000606374 441 ntBASIC1.12□□□□□ -2.23
MMP1P03956 AC011476.5-201ENST00000615594 130 ntBASIC1.12□□□□□ -2.23
MMP1P03956 U6.92-201ENST00000636464 89 ntBASIC1.12□□□□□ -2.23
MMP1P03956 RNU6-1123P-201ENST00000362347 106 ntBASIC1.11□□□□□ -2.23
MMP1P03956 RNU6-1266P-201ENST00000362794 105 ntBASIC1.11□□□□□ -2.23
MMP1P03956 Y_RNA.101-201ENST00000363154 102 ntBASIC1.11□□□□□ -2.23
MMP1P03956 Y_RNA.419-201ENST00000384041 102 ntBASIC1.11□□□□□ -2.23
MMP1P03956 Y_RNA.428-201ENST00000384078 102 ntBASIC1.11□□□□□ -2.23
MMP1P03956 RNU6-950P-201ENST00000384651 107 ntBASIC1.11□□□□□ -2.23
MMP1P03956 RNA5SP323-201ENST00000391094 133 ntBASIC1.11□□□□□ -2.23
MMP1P03956 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.11□□□□□ -2.23
MMP1P03956 AC010154.1-201ENST00000425857 269 ntBASIC1.11□□□□□ -2.23
MMP1P03956 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.11□□□□□ -2.23
MMP1P03956 AC236972.2-201ENST00000434979 310 ntBASIC1.11□□□□□ -2.23
MMP1P03956 RPS27P22-201ENST00000478056 241 ntBASIC1.11□□□□□ -2.23
MMP1P03956 AC097462.1-201ENST00000514125 324 ntBASIC1.11□□□□□ -2.23
MMP1P03956 RNA5SP436-201ENST00000516020 115 ntBASIC1.11□□□□□ -2.23
MMP1P03956 RNU1-142P-201ENST00000516682 145 ntBASIC1.11□□□□□ -2.23
MMP1P03956 SNORD116.3-201ENST00000517176 78 ntBASIC1.11□□□□□ -2.23
MMP1P03956 RNU2-12P-201ENST00000517216 168 ntBASIC1.11□□□□□ -2.23
MMP1P03956 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.11□□□□□ -2.23
MMP1P03956 AL512310.8-201ENST00000550183 120 ntBASIC1.11□□□□□ -2.23
MMP1P03956 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.11□□□□□ -2.23
MMP1P03956 CYP3A52P-201ENST00000563326 91 ntBASIC1.11□□□□□ -2.23
MMP1P03956 AC006600.1-201ENST00000572529 153 ntBASIC1.11□□□□□ -2.23
MMP1P03956 AL929325.1-201ENST00000603096 117 ntBASIC1.11□□□□□ -2.23
MMP1P03956 AC092447.9-201ENST00000603395 144 ntBASIC1.11□□□□□ -2.23
MMP1P03956 SNORD58B-201ENST00000607313 66 ntBASIC1.11□□□□□ -2.23
MMP1P03956 AL365434.2-201ENST00000607979 234 ntBASIC1.11□□□□□ -2.23
MMP1P03956 AC040896.1-201ENST00000613819 479 ntBASIC1.11□□□□□ -2.23
MMP1P03956 Y_RNA.27-201ENST00000362540 103 ntBASIC1.1□□□□□ -2.23
MMP1P03956 Y_RNA.80-201ENST00000362996 102 ntBASIC1.1□□□□□ -2.23
MMP1P03956 SNORD115-30-201ENST00000364117 82 ntBASIC1.1□□□□□ -2.23
MMP1P03956 RNU5E-4P-201ENST00000364931 120 ntBASIC1.1□□□□□ -2.23
MMP1P03956 RNU6-867P-201ENST00000364956 107 ntBASIC1.1□□□□□ -2.23
MMP1P03956 RNU6-117P-201ENST00000365415 107 ntBASIC1.1□□□□□ -2.23
MMP1P03956 Y_RNA.393-201ENST00000383936 102 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms