Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 Y_RNA.191-201ENST00000363972 113 ntBASIC0.87□□□□□ -2.27
MBD3O95983 U8.5-201ENST00000364528 136 ntBASIC0.87□□□□□ -2.27
MBD3O95983 RNU6-1105P-201ENST00000384774 107 ntBASIC0.87□□□□□ -2.27
MBD3O95983 Y_RNA.577-201ENST00000384794 101 ntBASIC0.87□□□□□ -2.27
MBD3O95983 SNORA75.4-201ENST00000391278 119 ntBASIC0.87□□□□□ -2.27
MBD3O95983 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.87□□□□□ -2.27
MBD3O95983 AC114482.1-201ENST00000418010 247 ntBASIC0.87□□□□□ -2.27
MBD3O95983 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.87□□□□□ -2.27
MBD3O95983 Y_RNA.124-201ENST00000363339 93 ntBASIC0.86□□□□□ -2.27
MBD3O95983 Y_RNA.166-201ENST00000363730 102 ntBASIC0.86□□□□□ -2.27
MBD3O95983 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.86□□□□□ -2.27
MBD3O95983 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.86□□□□□ -2.27
MBD3O95983 FCF1P9-201ENST00000412546 282 ntBASIC0.86□□□□□ -2.27
MBD3O95983 MTND4P28-201ENST00000426217 387 ntBASIC0.86□□□□□ -2.27
MBD3O95983 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.86□□□□□ -2.27
MBD3O95983 U8.19-201ENST00000459095 133 ntBASIC0.86□□□□□ -2.27
MBD3O95983 RNU7-21P-201ENST00000459430 62 ntBASIC0.86□□□□□ -2.27
MBD3O95983 SNORD124-201ENST00000459577 104 ntBASIC0.86□□□□□ -2.27
MBD3O95983 HMGN1P7-201ENST00000491722 313 ntBASIC0.86□□□□□ -2.27
MBD3O95983 RNU6-947P-201ENST00000516264 106 ntBASIC0.86□□□□□ -2.27
MBD3O95983 AC022616.4-201ENST00000522985 181 ntBASIC0.86□□□□□ -2.27
MBD3O95983 AC120024.3-201ENST00000603167 156 ntBASIC0.86□□□□□ -2.27
MBD3O95983 AL391903.3-201ENST00000612158 163 ntBASIC0.86□□□□□ -2.27
MBD3O95983 MIR6866-201ENST00000638146 69 ntBASIC0.86□□□□□ -2.27
MBD3O95983 CASC19-280ENST00000642102 1351 ntBASIC0.85□□□□□ -2.27
MBD3O95983 Y_RNA.122-201ENST00000363331 96 ntBASIC0.85□□□□□ -2.27
MBD3O95983 SNORD115-30-201ENST00000364117 82 ntBASIC0.85□□□□□ -2.27
MBD3O95983 Y_RNA.336-201ENST00000365307 109 ntBASIC0.85□□□□□ -2.27
MBD3O95983 AC233266.1-201ENST00000454518 96 ntBASIC0.85□□□□□ -2.27
MBD3O95983 ELOCP24-201ENST00000456370 334 ntBASIC0.85□□□□□ -2.27
MBD3O95983 AC245047.8-201ENST00000456455 284 ntBASIC0.85□□□□□ -2.27
MBD3O95983 MIR2053-201ENST00000459295 91 ntBASIC0.85□□□□□ -2.27
MBD3O95983 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.85□□□□□ -2.27
MBD3O95983 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.85□□□□□ -2.27
MBD3O95983 Y_RNA.691-201ENST00000516611 103 ntBASIC0.85□□□□□ -2.27
MBD3O95983 AC023442.1-201ENST00000531247 422 ntBASIC0.85□□□□□ -2.27
MBD3O95983 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.85□□□□□ -2.27
MBD3O95983 AC242852.1-201ENST00000612151 96 ntBASIC0.85□□□□□ -2.27
MBD3O95983 MIR6504-201ENST00000613520 61 ntBASIC0.85□□□□□ -2.27
MBD3O95983 AC244015.1-201ENST00000622301 99 ntBASIC0.85□□□□□ -2.27
MBD3O95983 RNU6-969P-201ENST00000383900 105 ntBASIC0.84□□□□□ -2.27
MBD3O95983 RNU6-767P-201ENST00000384132 107 ntBASIC0.84□□□□□ -2.27
MBD3O95983 MIR526A1-201ENST00000384897 85 ntBASIC0.84□□□□□ -2.27
MBD3O95983 MIR452-201ENST00000385020 85 ntBASIC0.84□□□□□ -2.27
MBD3O95983 MIR518E-201ENST00000385252 88 ntBASIC0.84□□□□□ -2.27
MBD3O95983 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
MBD3O95983 AL354751.2-201ENST00000415471 210 ntBASIC0.84□□□□□ -2.27
MBD3O95983 MTND5P15-201ENST00000434246 349 ntBASIC0.84□□□□□ -2.27
MBD3O95983 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.84□□□□□ -2.27
MBD3O95983 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.84□□□□□ -2.27
MBD3O95983 AC104332.1-201ENST00000440471 797 ntBASIC0.84□□□□□ -2.27
MBD3O95983 RPS4XP11-201ENST00000446897 772 ntBASIC0.84□□□□□ -2.27
MBD3O95983 RNU7-90P-201ENST00000459216 62 ntBASIC0.84□□□□□ -2.27
MBD3O95983 RNU7-30P-201ENST00000516835 62 ntBASIC0.84□□□□□ -2.27
MBD3O95983 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.84□□□□□ -2.27
MBD3O95983 MIR4698-201ENST00000577795 80 ntBASIC0.84□□□□□ -2.27
MBD3O95983 FAM106DP-201ENST00000586416 501 ntBASIC0.84□□□□□ -2.27
MBD3O95983 AC211469.2-201ENST00000605461 205 ntBASIC0.84□□□□□ -2.27
MBD3O95983 AC004467.1-201ENST00000615678 330 ntBASIC0.84□□□□□ -2.27
MBD3O95983 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.84□□□□□ -2.27
MBD3O95983 MIR625-201ENST00000385047 85 ntBASIC0.83□□□□□ -2.28
MBD3O95983 SNORA69.1-201ENST00000390904 137 ntBASIC0.83□□□□□ -2.28
MBD3O95983 RNA5SP511-201ENST00000410487 115 ntBASIC0.83□□□□□ -2.28
MBD3O95983 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.83□□□□□ -2.28
MBD3O95983 AC093019.1-201ENST00000443135 252 ntBASIC0.83□□□□□ -2.28
MBD3O95983 AC069439.1-201ENST00000494739 167 ntBASIC0.83□□□□□ -2.28
MBD3O95983 PDCD5P2-201ENST00000507570 312 ntBASIC0.83□□□□□ -2.28
MBD3O95983 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.83□□□□□ -2.28
MBD3O95983 AC006380.1-201ENST00000603598 186 ntBASIC0.83□□□□□ -2.28
MBD3O95983 AL096861.1-201ENST00000610899 123 ntBASIC0.83□□□□□ -2.28
MBD3O95983 AC106800.4-201ENST00000614905 153 ntBASIC0.83□□□□□ -2.28
MBD3O95983 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
MBD3O95983 AC027514.1-201ENST00000588561 1603 ntBASIC0.82□□□□□ -2.28
MBD3O95983 RNU6-99P-201ENST00000364721 107 ntBASIC0.82□□□□□ -2.28
MBD3O95983 AC117470.1-201ENST00000381974 330 ntBASIC0.82□□□□□ -2.28
MBD3O95983 RNU6-163P-201ENST00000384396 106 ntBASIC0.82□□□□□ -2.28
MBD3O95983 Y_RNA.592-201ENST00000410274 109 ntBASIC0.82□□□□□ -2.28
MBD3O95983 RNU2-54P-201ENST00000410299 190 ntBASIC0.82□□□□□ -2.28
MBD3O95983 AC006461.1-201ENST00000412637 326 ntBASIC0.82□□□□□ -2.28
MBD3O95983 RPL23AP50-201ENST00000434149 455 ntBASIC0.82□□□□□ -2.28
MBD3O95983 PSMC1P5-201ENST00000512850 177 ntBASIC0.82□□□□□ -2.28
MBD3O95983 RNU6-408P-201ENST00000515910 100 ntBASIC0.82□□□□□ -2.28
MBD3O95983 Y_RNA.673-201ENST00000516306 88 ntBASIC0.82□□□□□ -2.28
MBD3O95983 RNU6-1337P-201ENST00000516525 95 ntBASIC0.82□□□□□ -2.28
MBD3O95983 RNA5SP102-201ENST00000516865 106 ntBASIC0.82□□□□□ -2.28
MBD3O95983 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
MBD3O95983 MIR1244-1-201ENST00000612829 85 ntBASIC0.82□□□□□ -2.28
MBD3O95983 AC240442.1-201ENST00000616055 283 ntBASIC0.82□□□□□ -2.28
MBD3O95983 AC087588.2-201ENST00000617667 426 ntBASIC0.82□□□□□ -2.28
MBD3O95983 MIR1244-3-201ENST00000635744 85 ntBASIC0.82□□□□□ -2.28
MBD3O95983 MIR1244-2-201ENST00000636449 85 ntBASIC0.82□□□□□ -2.28
MBD3O95983 MIR1244-4-202ENST00000636813 85 ntBASIC0.82□□□□□ -2.28
MBD3O95983 RNU6-845P-201ENST00000362578 103 ntBASIC0.81□□□□□ -2.28
MBD3O95983 SNORD114-27-201ENST00000363766 70 ntBASIC0.81□□□□□ -2.28
MBD3O95983 Y_RNA.279-201ENST00000364763 95 ntBASIC0.81□□□□□ -2.28
MBD3O95983 SNORD116-13-201ENST00000384408 92 ntBASIC0.81□□□□□ -2.28
MBD3O95983 RNY3P4-201ENST00000384428 101 ntBASIC0.81□□□□□ -2.28
MBD3O95983 MIR100-201ENST00000385259 80 ntBASIC0.81□□□□□ -2.28
MBD3O95983 RNU2-64P-201ENST00000411315 191 ntBASIC0.81□□□□□ -2.28
MBD3O95983 MRPS18CP6-201ENST00000423587 223 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms