Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 MIR526A1-201ENST00000384897 85 ntBASIC5.22□□□□□ -1.57
NPM3O75607 RNU6-587P-201ENST00000391282 106 ntBASIC5.22□□□□□ -1.57
NPM3O75607 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.22□□□□□ -1.57
NPM3O75607 RPS26P2-201ENST00000440331 348 ntBASIC5.22□□□□□ -1.57
NPM3O75607 MIR2116-201ENST00000517221 80 ntBASIC5.22□□□□□ -1.57
NPM3O75607 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.22□□□□□ -1.57
NPM3O75607 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
NPM3O75607 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
NPM3O75607 AC107068.1-201ENST00000563286 4218 ntBASIC5.22□□□□□ -1.57
NPM3O75607 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.22□□□□□ -1.57
NPM3O75607 PWAR6-201ENST00000552334 4618 ntBASIC5.22□□□□□ -1.57
NPM3O75607 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
NPM3O75607 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NPM3O75607 RNA5SP151-201ENST00000365632 117 ntBASIC5.21□□□□□ -1.58
NPM3O75607 RNA5SP317-201ENST00000410176 116 ntBASIC5.21□□□□□ -1.58
NPM3O75607 RNA5SP311-201ENST00000411290 116 ntBASIC5.21□□□□□ -1.58
NPM3O75607 RNA5SP315-201ENST00000516340 116 ntBASIC5.21□□□□□ -1.58
NPM3O75607 SNORA31.9-201ENST00000516429 84 ntBASIC5.21□□□□□ -1.58
NPM3O75607 RNA5SP312-201ENST00000517068 116 ntBASIC5.21□□□□□ -1.58
NPM3O75607 SNORA74.3-201ENST00000517108 154 ntBASIC5.21□□□□□ -1.58
NPM3O75607 RN7SL176P-201ENST00000580352 264 ntBASIC5.21□□□□□ -1.58
NPM3O75607 MIR8069-1-201ENST00000616627 86 ntBASIC5.21□□□□□ -1.58
NPM3O75607 ZYXP1-201ENST00000617638 118 ntBASIC5.21□□□□□ -1.58
NPM3O75607 MIR8069-2-201ENST00000621412 86 ntBASIC5.21□□□□□ -1.58
NPM3O75607 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.21□□□□□ -1.58
NPM3O75607 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
NPM3O75607 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.21□□□□□ -1.58
NPM3O75607 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.58
NPM3O75607 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NPM3O75607 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NPM3O75607 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NPM3O75607 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NPM3O75607 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.21□□□□□ -1.58
NPM3O75607 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
NPM3O75607 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPM3O75607 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.2□□□□□ -1.58
NPM3O75607 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NPM3O75607 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPM3O75607 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.2□□□□□ -1.58
NPM3O75607 RNU6-800P-201ENST00000384473 103 ntBASIC5.2□□□□□ -1.58
NPM3O75607 RNU1-13P-201ENST00000384499 162 ntBASIC5.2□□□□□ -1.58
NPM3O75607 SNORA72.6-201ENST00000384520 129 ntBASIC5.2□□□□□ -1.58
NPM3O75607 MIR635-201ENST00000384830 98 ntBASIC5.2□□□□□ -1.58
NPM3O75607 AL157831.1-201ENST00000426134 473 ntBASIC5.2□□□□□ -1.58
NPM3O75607 RNU7-43P-201ENST00000516554 64 ntBASIC5.2□□□□□ -1.58
NPM3O75607 AC022695.1-201ENST00000522089 237 ntBASIC5.2□□□□□ -1.58
NPM3O75607 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPM3O75607 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPM3O75607 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPM3O75607 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPM3O75607 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPM3O75607 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPM3O75607 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.19□□□□□ -1.58
NPM3O75607 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NPM3O75607 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPM3O75607 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
NPM3O75607 AL023284.1-201ENST00000403956 276 ntBASIC5.19□□□□□ -1.58
NPM3O75607 SNRPGP12-201ENST00000449481 213 ntBASIC5.19□□□□□ -1.58
NPM3O75607 RNA5SP49-201ENST00000516450 115 ntBASIC5.19□□□□□ -1.58
NPM3O75607 AC090897.1-201ENST00000580909 226 ntBASIC5.19□□□□□ -1.58
NPM3O75607 MIR4536-1-201ENST00000583537 88 ntBASIC5.19□□□□□ -1.58
NPM3O75607 AC091905.2-201ENST00000623143 306 ntBASIC5.19□□□□□ -1.58
NPM3O75607 SCARNA15.3-201ENST00000626315 122 ntBASIC5.19□□□□□ -1.58
NPM3O75607 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPM3O75607 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
NPM3O75607 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.19□□□□□ -1.58
NPM3O75607 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
NPM3O75607 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPM3O75607 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPM3O75607 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
NPM3O75607 RNU1-70P-201ENST00000362618 164 ntBASIC5.18□□□□□ -1.58
NPM3O75607 SNORD38B-201ENST00000384690 67 ntBASIC5.18□□□□□ -1.58
NPM3O75607 MIR660-201ENST00000385235 97 ntBASIC5.18□□□□□ -1.58
NPM3O75607 MTND4LP19-201ENST00000403051 166 ntBASIC5.18□□□□□ -1.58
NPM3O75607 HMGN2P27-201ENST00000427352 270 ntBASIC5.18□□□□□ -1.58
NPM3O75607 SNORD38B-202ENST00000625943 69 ntBASIC5.18□□□□□ -1.58
NPM3O75607 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
NPM3O75607 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
NPM3O75607 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
NPM3O75607 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NPM3O75607 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NPM3O75607 RNA5SP72-201ENST00000364442 117 ntBASIC5.17□□□□□ -1.58
NPM3O75607 RNU1-63P-201ENST00000383902 164 ntBASIC5.17□□□□□ -1.58
NPM3O75607 Y_RNA.532-201ENST00000384590 113 ntBASIC5.17□□□□□ -1.58
NPM3O75607 RNU4-83P-201ENST00000410863 133 ntBASIC5.17□□□□□ -1.58
NPM3O75607 RN7SL600P-201ENST00000581811 299 ntBASIC5.17□□□□□ -1.58
NPM3O75607 AL357312.1-201ENST00000603879 298 ntBASIC5.17□□□□□ -1.58
NPM3O75607 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.17□□□□□ -1.58
NPM3O75607 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
NPM3O75607 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NPM3O75607 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC5.16□□□□□ -1.58
NPM3O75607 RNU1-14P-201ENST00000362759 152 ntBASIC5.16□□□□□ -1.58
NPM3O75607 SNORA38-201ENST00000363946 132 ntBASIC5.16□□□□□ -1.58
NPM3O75607 AC027119.1-201ENST00000440877 241 ntBASIC5.16□□□□□ -1.58
NPM3O75607 RNU6-303P-201ENST00000517091 106 ntBASIC5.16□□□□□ -1.58
NPM3O75607 AC141846.1-201ENST00000568348 142 ntBASIC5.16□□□□□ -1.58
NPM3O75607 AC008133.2-201ENST00000624540 351 ntBASIC5.16□□□□□ -1.58
NPM3O75607 U6.111-201ENST00000636093 83 ntBASIC5.16□□□□□ -1.58
NPM3O75607 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPM3O75607 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms