Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 AC006441.5-201ENST00000612680 209 ntBASIC-1.2□□□□□ -2.6
UBR3Q6ZT12 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.2□□□□□ -2.6
UBR3Q6ZT12 RNU6-137P-201ENST00000363680 108 ntBASIC-1.2□□□□□ -2.6
UBR3Q6ZT12 RNU6-116P-201ENST00000384042 109 ntBASIC-1.2□□□□□ -2.6
UBR3Q6ZT12 SNORA36A-201ENST00000384221 132 ntBASIC-1.2□□□□□ -2.6
UBR3Q6ZT12 MT-TY-201ENST00000387409 66 ntBASIC-1.2□□□□□ -2.6
UBR3Q6ZT12 AC004386.2-201ENST00000441858 148 ntBASIC-1.2□□□□□ -2.6
UBR3Q6ZT12 BTBD7P2-201ENST00000441962 620 ntBASIC-1.2□□□□□ -2.6
UBR3Q6ZT12 MIR18B-201ENST00000454574 71 ntBASIC-1.2□□□□□ -2.6
UBR3Q6ZT12 AC091959.1-201ENST00000495857 238 ntBASIC-1.2□□□□□ -2.6
UBR3Q6ZT12 MIR3912-201ENST00000577566 105 ntBASIC-1.2□□□□□ -2.6
UBR3Q6ZT12 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-1.2□□□□□ -2.6
UBR3Q6ZT12 MIR4752-201ENST00000579672 72 ntBASIC-1.2□□□□□ -2.6
UBR3Q6ZT12 AC016597.2-201ENST00000613256 341 ntBASIC-1.2□□□□□ -2.6
UBR3Q6ZT12 RNU4-21P-201ENST00000362802 126 ntBASIC-1.21□□□□□ -2.6
UBR3Q6ZT12 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.21□□□□□ -2.6
UBR3Q6ZT12 RNU6-873P-201ENST00000363833 107 ntBASIC-1.21□□□□□ -2.6
UBR3Q6ZT12 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.21□□□□□ -2.6
UBR3Q6ZT12 Y_RNA.504-201ENST00000384481 104 ntBASIC-1.21□□□□□ -2.6
UBR3Q6ZT12 EPS15P1-201ENST00000448836 336 ntBASIC-1.21□□□□□ -2.6
UBR3Q6ZT12 MTCO3P8-201ENST00000453691 755 ntBASIC-1.21□□□□□ -2.6
UBR3Q6ZT12 RNU7-182P-201ENST00000459009 62 ntBASIC-1.21□□□□□ -2.6
UBR3Q6ZT12 SNORD65B-201ENST00000459126 73 ntBASIC-1.21□□□□□ -2.6
UBR3Q6ZT12 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-1.21□□□□□ -2.6
UBR3Q6ZT12 SNORA31.14-201ENST00000516728 116 ntBASIC-1.21□□□□□ -2.6
UBR3Q6ZT12 MIR378D2-201ENST00000580636 98 ntBASIC-1.21□□□□□ -2.6
UBR3Q6ZT12 AL445435.1-201ENST00000604232 665 ntBASIC-1.21□□□□□ -2.6
UBR3Q6ZT12 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-1.21□□□□□ -2.6
UBR3Q6ZT12 uc_338.4-201ENST00000616635 176 ntBASIC-1.21□□□□□ -2.6
UBR3Q6ZT12 AC244669.1-204ENST00000621564 178 ntBASIC-1.21□□□□□ -2.6
UBR3Q6ZT12 AC099786.3-201ENST00000565735 1410 ntBASIC-1.21□□□□□ -2.6
UBR3Q6ZT12 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.22□□□□□ -2.6
UBR3Q6ZT12 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.22□□□□□ -2.6
UBR3Q6ZT12 Y_RNA.370-201ENST00000365589 108 ntBASIC-1.22□□□□□ -2.6
UBR3Q6ZT12 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.22□□□□□ -2.6
UBR3Q6ZT12 AP000542.1-201ENST00000448473 371 ntBASIC-1.22□□□□□ -2.6
UBR3Q6ZT12 RNU6-135P-201ENST00000516769 101 ntBASIC-1.22□□□□□ -2.6
UBR3Q6ZT12 MIR6507-201ENST00000613630 70 ntBASIC-1.22□□□□□ -2.6
UBR3Q6ZT12 RNU6-511P-201ENST00000363496 107 ntBASIC-1.22□□□□□ -2.61
UBR3Q6ZT12 SNORD28-201ENST00000384706 75 ntBASIC-1.22□□□□□ -2.61
UBR3Q6ZT12 RNU6-607P-201ENST00000411283 108 ntBASIC-1.22□□□□□ -2.61
UBR3Q6ZT12 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-1.22□□□□□ -2.61
UBR3Q6ZT12 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-1.22□□□□□ -2.61
UBR3Q6ZT12 RPL23AP75-201ENST00000491601 451 ntBASIC-1.22□□□□□ -2.61
UBR3Q6ZT12 AC005562.2-201ENST00000618264 111 ntBASIC-1.22□□□□□ -2.61
UBR3Q6ZT12 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.23□□□□□ -2.61
UBR3Q6ZT12 Y_RNA.311-201ENST00000365068 96 ntBASIC-1.23□□□□□ -2.61
UBR3Q6ZT12 RNA5SP216-201ENST00000516111 123 ntBASIC-1.23□□□□□ -2.61
UBR3Q6ZT12 MTATP6P2-201ENST00000603319 678 ntBASIC-1.23□□□□□ -2.61
UBR3Q6ZT12 AL078596.1-201ENST00000624856 447 ntBASIC-1.23□□□□□ -2.61
UBR3Q6ZT12 SNORD68-201ENST00000363214 84 ntBASIC-1.24□□□□□ -2.61
UBR3Q6ZT12 RNU6-336P-201ENST00000364891 107 ntBASIC-1.24□□□□□ -2.61
UBR3Q6ZT12 AC005178.1-201ENST00000508392 440 ntBASIC-1.24□□□□□ -2.61
UBR3Q6ZT12 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.24□□□□□ -2.61
UBR3Q6ZT12 AP003168.1-201ENST00000530091 307 ntBASIC-1.24□□□□□ -2.61
UBR3Q6ZT12 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.24□□□□□ -2.61
UBR3Q6ZT12 RNY4P36-201ENST00000391116 96 ntBASIC-1.24□□□□□ -2.61
UBR3Q6ZT12 SNORA26.5-201ENST00000391215 123 ntBASIC-1.24□□□□□ -2.61
UBR3Q6ZT12 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.24□□□□□ -2.61
UBR3Q6ZT12 RNU6-370P-201ENST00000411008 104 ntBASIC-1.24□□□□□ -2.61
UBR3Q6ZT12 AL117339.3-201ENST00000418733 162 ntBASIC-1.24□□□□□ -2.61
UBR3Q6ZT12 TRIM60P10Y-201ENST00000425589 751 ntBASIC-1.24□□□□□ -2.61
UBR3Q6ZT12 snoU13.16-201ENST00000459350 104 ntBASIC-1.24□□□□□ -2.61
UBR3Q6ZT12 RNU2-10P-201ENST00000516375 211 ntBASIC-1.24□□□□□ -2.61
UBR3Q6ZT12 MIR544B-201ENST00000582372 78 ntBASIC-1.24□□□□□ -2.61
UBR3Q6ZT12 AC012409.4-201ENST00000612923 249 ntBASIC-1.24□□□□□ -2.61
UBR3Q6ZT12 AC078880.5-201ENST00000617845 421 ntBASIC-1.24□□□□□ -2.61
UBR3Q6ZT12 RNU4-36P-201ENST00000364294 144 ntBASIC-1.25□□□□□ -2.61
UBR3Q6ZT12 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-1.25□□□□□ -2.61
UBR3Q6ZT12 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.25□□□□□ -2.61
UBR3Q6ZT12 FGF7P1-201ENST00000582820 288 ntBASIC-1.25□□□□□ -2.61
UBR3Q6ZT12 MIR4639-201ENST00000584938 69 ntBASIC-1.25□□□□□ -2.61
UBR3Q6ZT12 AC069545.1-201ENST00000605671 358 ntBASIC-1.25□□□□□ -2.61
UBR3Q6ZT12 AL139418.1-201ENST00000613613 177 ntBASIC-1.25□□□□□ -2.61
UBR3Q6ZT12 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-1.25□□□□□ -2.61
UBR3Q6ZT12 SNORA43.4-201ENST00000629559 138 ntBASIC-1.25□□□□□ -2.61
UBR3Q6ZT12 AC093726.3-201ENST00000637588 150 ntBASIC-1.25□□□□□ -2.61
UBR3Q6ZT12 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.26□□□□□ -2.61
UBR3Q6ZT12 U6.112-201ENST00000384129 70 ntBASIC-1.26□□□□□ -2.61
UBR3Q6ZT12 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.26□□□□□ -2.61
UBR3Q6ZT12 AC006210.1-201ENST00000424882 111 ntBASIC-1.26□□□□□ -2.61
UBR3Q6ZT12 MTCO1P27-201ENST00000448269 226 ntBASIC-1.26□□□□□ -2.61
UBR3Q6ZT12 ZNF114P1-201ENST00000453500 292 ntBASIC-1.26□□□□□ -2.61
UBR3Q6ZT12 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.26□□□□□ -2.61
UBR3Q6ZT12 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1.26□□□□□ -2.61
UBR3Q6ZT12 AC091133.4-201ENST00000511142 308 ntBASIC-1.26□□□□□ -2.61
UBR3Q6ZT12 RNU6-881P-201ENST00000516813 102 ntBASIC-1.26□□□□□ -2.61
UBR3Q6ZT12 RNU6-430P-201ENST00000517078 107 ntBASIC-1.26□□□□□ -2.61
UBR3Q6ZT12 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.26□□□□□ -2.61
UBR3Q6ZT12 OR4H6P-202ENST00000603819 340 ntBASIC-1.26□□□□□ -2.61
UBR3Q6ZT12 AC010205.1-201ENST00000616668 449 ntBASIC-1.26□□□□□ -2.61
UBR3Q6ZT12 AC022306.2-201ENST00000617563 647 ntBASIC-1.26□□□□□ -2.61
UBR3Q6ZT12 MIR320C1-201ENST00000408566 88 ntBASIC-1.26□□□□□ -2.61
UBR3Q6ZT12 RNU2-39P-201ENST00000410604 198 ntBASIC-1.26□□□□□ -2.61
UBR3Q6ZT12 AL158050.1-201ENST00000416077 457 ntBASIC-1.26□□□□□ -2.61
UBR3Q6ZT12 RNU6-732P-201ENST00000516033 103 ntBASIC-1.26□□□□□ -2.61
UBR3Q6ZT12 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.26□□□□□ -2.61
UBR3Q6ZT12 MIR570-201ENST00000384917 97 ntBASIC-1.27□□□□□ -2.61
UBR3Q6ZT12 MIR15B-201ENST00000385045 98 ntBASIC-1.27□□□□□ -2.61
UBR3Q6ZT12 SNORD28B-201ENST00000390993 75 ntBASIC-1.27□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms