Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.12□□□□□ -2.43
TPM1P09493 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.12□□□□□ -2.43
TPM1P09493 MTND2P39-201ENST00000457230 764 ntBASIC-0.12□□□□□ -2.43
TPM1P09493 AC027514.1-201ENST00000588561 1603 ntBASIC-0.13□□□□□ -2.43
TPM1P09493 SNORD114-23-201ENST00000363536 72 ntBASIC-0.13□□□□□ -2.43
TPM1P09493 RNU4-67P-201ENST00000364569 141 ntBASIC-0.13□□□□□ -2.43
TPM1P09493 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.13□□□□□ -2.43
TPM1P09493 RNU4-20P-201ENST00000365601 151 ntBASIC-0.13□□□□□ -2.43
TPM1P09493 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.13□□□□□ -2.43
TPM1P09493 RNU6-128P-201ENST00000383976 107 ntBASIC-0.13□□□□□ -2.43
TPM1P09493 AL390729.2-201ENST00000416137 156 ntBASIC-0.13□□□□□ -2.43
TPM1P09493 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.13□□□□□ -2.43
TPM1P09493 AL353193.1-201ENST00000421444 268 ntBASIC-0.13□□□□□ -2.43
TPM1P09493 MTND1P26-201ENST00000440488 538 ntBASIC-0.13□□□□□ -2.43
TPM1P09493 AC093534.1-201ENST00000504977 132 ntBASIC-0.13□□□□□ -2.43
TPM1P09493 RNU6-863P-201ENST00000515989 104 ntBASIC-0.13□□□□□ -2.43
TPM1P09493 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC-0.13□□□□□ -2.43
TPM1P09493 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-0.13□□□□□ -2.43
TPM1P09493 MIR548AO-201ENST00000579992 96 ntBASIC-0.13□□□□□ -2.43
TPM1P09493 AC245884.10-201ENST00000597355 337 ntBASIC-0.13□□□□□ -2.43
TPM1P09493 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.13□□□□□ -2.43
TPM1P09493 U6.115-201ENST00000636045 103 ntBASIC-0.13□□□□□ -2.43
TPM1P09493 AC121333.1-201ENST00000567488 2709 ntBASIC-0.14□□□□□ -2.43
TPM1P09493 MIR411-201ENST00000362239 96 ntBASIC-0.14□□□□□ -2.43
TPM1P09493 SNORD114-9-201ENST00000364370 72 ntBASIC-0.14□□□□□ -2.43
TPM1P09493 RNU6-396P-201ENST00000365369 105 ntBASIC-0.14□□□□□ -2.43
TPM1P09493 RNU6-281P-201ENST00000384212 103 ntBASIC-0.14□□□□□ -2.43
TPM1P09493 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.14□□□□□ -2.43
TPM1P09493 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.14□□□□□ -2.43
TPM1P09493 AL355375.2-201ENST00000574825 175 ntBASIC-0.14□□□□□ -2.43
TPM1P09493 AC005828.6-201ENST00000606610 232 ntBASIC-0.14□□□□□ -2.43
TPM1P09493 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC-0.14□□□□□ -2.43
TPM1P09493 SNORD118-201ENST00000363593 134 ntBASIC-0.15□□□□□ -2.43
TPM1P09493 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
TPM1P09493 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.15□□□□□ -2.43
TPM1P09493 AL365203.2-201ENST00000423444 196 ntBASIC-0.15□□□□□ -2.43
TPM1P09493 RNU6-63P-201ENST00000516690 95 ntBASIC-0.15□□□□□ -2.43
TPM1P09493 AC040904.1-201ENST00000590850 223 ntBASIC-0.15□□□□□ -2.43
TPM1P09493 AC005014.3-201ENST00000605985 190 ntBASIC-0.15□□□□□ -2.43
TPM1P09493 MIR6734-201ENST00000621166 68 ntBASIC-0.15□□□□□ -2.43
TPM1P09493 uc_338.16-201ENST00000621804 95 ntBASIC-0.15□□□□□ -2.43
TPM1P09493 RNA5SP214-201ENST00000363378 118 ntBASIC-0.16□□□□□ -2.44
TPM1P09493 RNU6-580P-201ENST00000365159 107 ntBASIC-0.16□□□□□ -2.44
TPM1P09493 ELOCP21-201ENST00000412558 336 ntBASIC-0.16□□□□□ -2.44
TPM1P09493 AL354751.2-201ENST00000415471 210 ntBASIC-0.16□□□□□ -2.44
TPM1P09493 AL139396.1-201ENST00000421137 167 ntBASIC-0.16□□□□□ -2.44
TPM1P09493 SUMO1P2-201ENST00000452524 304 ntBASIC-0.16□□□□□ -2.44
TPM1P09493 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.16□□□□□ -2.44
TPM1P09493 RNU7-175P-201ENST00000515915 61 ntBASIC-0.16□□□□□ -2.44
TPM1P09493 ACA59.1-201ENST00000515966 143 ntBASIC-0.16□□□□□ -2.44
TPM1P09493 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.16□□□□□ -2.44
TPM1P09493 RNA5SP227-201ENST00000516184 113 ntBASIC-0.16□□□□□ -2.44
TPM1P09493 SNORD45.4-201ENST00000516629 73 ntBASIC-0.16□□□□□ -2.44
TPM1P09493 RNA5SP94-201ENST00000516917 108 ntBASIC-0.16□□□□□ -2.44
TPM1P09493 AP003327.1-201ENST00000529684 127 ntBASIC-0.16□□□□□ -2.44
TPM1P09493 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.16□□□□□ -2.44
TPM1P09493 MIR4514-201ENST00000581410 57 ntBASIC-0.16□□□□□ -2.44
TPM1P09493 SNORA4-201ENST00000584302 138 ntBASIC-0.16□□□□□ -2.44
TPM1P09493 Z94722.1-201ENST00000604328 474 ntBASIC-0.16□□□□□ -2.44
TPM1P09493 SNORA25.18-201ENST00000607153 114 ntBASIC-0.16□□□□□ -2.44
TPM1P09493 MIR377-201ENST00000362145 69 ntBASIC-0.17□□□□□ -2.44
TPM1P09493 RNA5SP432-201ENST00000362480 116 ntBASIC-0.17□□□□□ -2.44
TPM1P09493 SNORD114-7-201ENST00000362520 77 ntBASIC-0.17□□□□□ -2.44
TPM1P09493 RNU6-934P-201ENST00000365154 107 ntBASIC-0.17□□□□□ -2.44
TPM1P09493 UQCRBP2-201ENST00000447827 297 ntBASIC-0.17□□□□□ -2.44
TPM1P09493 AC112693.2-201ENST00000556538 232 ntBASIC-0.17□□□□□ -2.44
TPM1P09493 MIR5696-201ENST00000578474 85 ntBASIC-0.17□□□□□ -2.44
TPM1P09493 MIR4804-201ENST00000581683 73 ntBASIC-0.17□□□□□ -2.44
TPM1P09493 MIR6718-201ENST00000616153 80 ntBASIC-0.17□□□□□ -2.44
TPM1P09493 AC099654.12-201ENST00000639868 649 ntBASIC-0.17□□□□□ -2.44
TPM1P09493 Y_RNA.169-201ENST00000363745 96 ntBASIC-0.18□□□□□ -2.44
TPM1P09493 MT-TN-201ENST00000387400 73 ntBASIC-0.18□□□□□ -2.44
TPM1P09493 HMGN2P32-201ENST00000444648 269 ntBASIC-0.18□□□□□ -2.44
TPM1P09493 snoU13.21-201ENST00000459368 105 ntBASIC-0.18□□□□□ -2.44
TPM1P09493 AC093023.1-201ENST00000547375 507 ntBASIC-0.18□□□□□ -2.44
TPM1P09493 MIR4768-201ENST00000585270 74 ntBASIC-0.18□□□□□ -2.44
TPM1P09493 AC023932.2-201ENST00000603176 175 ntBASIC-0.18□□□□□ -2.44
TPM1P09493 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.19□□□□□ -2.44
TPM1P09493 MIR522-201ENST00000385071 87 ntBASIC-0.19□□□□□ -2.44
TPM1P09493 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.19□□□□□ -2.44
TPM1P09493 RNA5SP436-201ENST00000516020 115 ntBASIC-0.19□□□□□ -2.44
TPM1P09493 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.2□□□□□ -2.44
TPM1P09493 MIR410-201ENST00000362222 80 ntBASIC-0.2□□□□□ -2.44
TPM1P09493 MIR514A2-201ENST00000385131 88 ntBASIC-0.2□□□□□ -2.44
TPM1P09493 MIR514A3-201ENST00000385132 88 ntBASIC-0.2□□□□□ -2.44
TPM1P09493 MTND3P23-201ENST00000431980 347 ntBASIC-0.2□□□□□ -2.44
TPM1P09493 MTND3P16-201ENST00000452205 344 ntBASIC-0.2□□□□□ -2.44
TPM1P09493 RN7SKP287-201ENST00000516546 266 ntBASIC-0.2□□□□□ -2.44
TPM1P09493 SNORA62.5-201ENST00000516634 120 ntBASIC-0.2□□□□□ -2.44
TPM1P09493 MIR4771-2-201ENST00000577758 74 ntBASIC-0.2□□□□□ -2.44
TPM1P09493 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.2□□□□□ -2.44
TPM1P09493 MIR548AR-201ENST00000582191 57 ntBASIC-0.2□□□□□ -2.44
TPM1P09493 MIR4771-1-201ENST00000582617 74 ntBASIC-0.2□□□□□ -2.44
TPM1P09493 MIR4290-201ENST00000583807 95 ntBASIC-0.2□□□□□ -2.44
TPM1P09493 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.2□□□□□ -2.44
TPM1P09493 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.21□□□□□ -2.44
TPM1P09493 MIR517A-201ENST00000385001 87 ntBASIC-0.21□□□□□ -2.44
TPM1P09493 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.21□□□□□ -2.44
TPM1P09493 AC007742.2-201ENST00000618226 398 ntBASIC-0.21□□□□□ -2.44
TPM1P09493 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms