Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 RNU6-414P-201ENST00000363705 104 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 Y_RNA.187-201ENST00000363918 113 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 Y_RNA.191-201ENST00000363972 113 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 MIR625-201ENST00000385047 85 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 RNU6-440P-201ENST00000390882 105 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 MIR1267-201ENST00000408723 78 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 RPS27P16-201ENST00000425758 201 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 RNU7-34P-201ENST00000459394 64 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 AC091021.1-201ENST00000468051 388 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 HMGN1P13-201ENST00000505795 138 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 AC010598.1-201ENST00000510378 103 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 AC008834.1-201ENST00000511612 175 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 AC097462.1-201ENST00000514125 324 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 RNA5SP20-201ENST00000515976 84 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 RNU6-1146P-201ENST00000516282 102 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 RNU6-1012P-201ENST00000516606 109 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 RNU6-307P-201ENST00000516743 106 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 SUMO2P16-201ENST00000519475 264 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 AC090821.2-201ENST00000523552 176 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 AC022432.1-201ENST00000595739 310 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 MIR6504-201ENST00000613520 61 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 AC007485.1-201ENST00000616755 206 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 U2.1-201ENST00000618978 145 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 MIR4272-201ENST00000635924 64 ntBASIC0.95□□□□□ -2.26
TRAV40A0A0B4J280 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 MIR369-201ENST00000362155 70 ntBASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 SNORA27.1-201ENST00000362604 124 ntBASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 SNORD114-27-201ENST00000363766 70 ntBASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 Y_RNA.813-201ENST00000364639 102 ntBASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 Y_RNA.269-201ENST00000364685 89 ntBASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 RNU6-20P-201ENST00000384106 107 ntBASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 MTND4LP11-201ENST00000422184 280 ntBASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 SDAD1P3-201ENST00000427380 333 ntBASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 AC245047.3-201ENST00000429428 127 ntBASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 AC074133.1-201ENST00000515696 183 ntBASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 RNU7-99P-201ENST00000516271 62 ntBASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 RNU6-1291P-201ENST00000516591 104 ntBASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 RNU2-12P-201ENST00000517216 168 ntBASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 AL137100.2-201ENST00000555786 315 ntBASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 AC006600.1-201ENST00000572529 153 ntBASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 MIR4709-201ENST00000577272 72 ntBASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 AC015688.6-201ENST00000577737 104 ntBASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 MIR4659A-201ENST00000580269 81 ntBASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 AC092447.9-201ENST00000603395 144 ntBASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 LARP7P1-201ENST00000605576 316 ntBASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 AL021879.1-201ENST00000611756 288 ntBASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 ICE2P2-201ENST00000483823 2787 ntBASIC0.94□□□□□ -2.26
TRAV40A0A0B4J280 AC005592.1-201ENST00000566527 1640 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 MIR410-201ENST00000362222 80 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 RNU6-1266P-201ENST00000362794 105 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 RNU6-626P-201ENST00000363354 107 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 SNORD115-30-201ENST00000364117 82 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 Y_RNA.243-201ENST00000364481 109 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 RNU6-117P-201ENST00000365415 107 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 SNORD116-13-201ENST00000384408 92 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 RNY1P14-201ENST00000384426 108 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 Y_RNA.509-201ENST00000384506 99 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 RNU6-1031P-201ENST00000384773 107 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 MIR150-201ENST00000385048 84 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 snoU13.9-201ENST00000458927 103 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 RPS26P55-201ENST00000471178 356 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 AC087343.1-201ENST00000477341 475 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 RNU7-172P-201ENST00000517125 64 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 RNU6-1116P-201ENST00000517269 99 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 AC024995.1-201ENST00000523014 93 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 MIR5188-201ENST00000583467 113 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 AC091178.2-201ENST00000584401 117 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 MIR4295-201ENST00000585286 85 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 AC005828.6-201ENST00000606610 232 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 AL365434.2-201ENST00000607979 234 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 AC240442.1-201ENST00000616055 283 ntBASIC0.93□□□□□ -2.26
TRAV40A0A0B4J280 Y_RNA.146-201ENST00000363549 102 ntBASIC0.92□□□□□ -2.26
TRAV40A0A0B4J280 Y_RNA.267-201ENST00000364679 109 ntBASIC0.92□□□□□ -2.26
TRAV40A0A0B4J280 RNY3P4-201ENST00000384428 101 ntBASIC0.92□□□□□ -2.26
TRAV40A0A0B4J280 MRPL35P1-201ENST00000404272 572 ntBASIC0.92□□□□□ -2.26
TRAV40A0A0B4J280 RNA5SP511-201ENST00000410487 115 ntBASIC0.92□□□□□ -2.26
TRAV40A0A0B4J280 RNA5SP475-201ENST00000410568 110 ntBASIC0.92□□□□□ -2.26
TRAV40A0A0B4J280 COX6CP10-201ENST00000416832 224 ntBASIC0.92□□□□□ -2.26
TRAV40A0A0B4J280 MTCO2P27-201ENST00000420740 428 ntBASIC0.92□□□□□ -2.26
TRAV40A0A0B4J280 CALM2P4-201ENST00000430810 426 ntBASIC0.92□□□□□ -2.26
TRAV40A0A0B4J280 AL135790.2-201ENST00000437701 267 ntBASIC0.92□□□□□ -2.26
TRAV40A0A0B4J280 AL137792.2-201ENST00000443484 235 ntBASIC0.92□□□□□ -2.26
TRAV40A0A0B4J280 STAG3L5P-204ENST00000443759 179 ntBASIC0.92□□□□□ -2.26
TRAV40A0A0B4J280 UBE2V1P7-201ENST00000446395 340 ntBASIC0.92□□□□□ -2.26
TRAV40A0A0B4J280 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.92□□□□□ -2.26
TRAV40A0A0B4J280 MIR4778-201ENST00000577635 80 ntBASIC0.92□□□□□ -2.26
TRAV40A0A0B4J280 MIR4452-201ENST00000583004 71 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms