Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC114982.1-201ENST00000469402 321 ntBASIC1□□□□□ -2.25
LINC00477Q96M19 RPS26P45-201ENST00000471748 340 ntBASIC1□□□□□ -2.25
LINC00477Q96M19 RNU6-1012P-201ENST00000516606 109 ntBASIC1□□□□□ -2.25
LINC00477Q96M19 AC006600.1-201ENST00000572529 153 ntBASIC1□□□□□ -2.25
LINC00477Q96M19 AP001094.1-201ENST00000579805 193 ntBASIC1□□□□□ -2.25
LINC00477Q96M19 AC092447.9-201ENST00000603395 144 ntBASIC1□□□□□ -2.25
LINC00477Q96M19 AC073413.2-201ENST00000604332 360 ntBASIC1□□□□□ -2.25
LINC00477Q96M19 PART1_1.1-201ENST00000611761 217 ntBASIC1□□□□□ -2.25
LINC00477Q96M19 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1□□□□□ -2.25
LINC00477Q96M19 U2.1-201ENST00000618978 145 ntBASIC1□□□□□ -2.25
LINC00477Q96M19 uc_338.22-201ENST00000622722 187 ntBASIC1□□□□□ -2.25
LINC00477Q96M19 AC100821.1-201ENST00000523153 2479 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 ZNF209P-201ENST00000593450 2304 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 RNU6-490P-201ENST00000362985 107 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 RNU1-17P-201ENST00000363022 152 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 RNU1-22P-201ENST00000363334 158 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 SNORD115-30-201ENST00000364117 82 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 RNU6-117P-201ENST00000365415 107 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 SNORD42.2-201ENST00000365570 69 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 RNU6-1264P-201ENST00000383891 107 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 Y_RNA.384-201ENST00000383909 102 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 RNU6-136P-201ENST00000384663 107 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 MIR520A-201ENST00000384862 85 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 MIR625-201ENST00000385047 85 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 MIR764-201ENST00000390811 85 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 Y_RNA.645-201ENST00000391229 102 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 MIR1253-201ENST00000408273 105 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 AC018865.2-201ENST00000423631 129 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 AL160004.2-201ENST00000432935 350 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 AC015922.2-201ENST00000435593 184 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 AL135790.2-201ENST00000437701 267 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 AL137792.2-201ENST00000443484 235 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 MRPS10P1-201ENST00000448483 130 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 RPS26P55-201ENST00000471178 356 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 RNU2-12P-201ENST00000517216 168 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 MIR4659A-201ENST00000580269 81 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 MIR4438-201ENST00000585271 93 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 AL080274.1-201ENST00000605565 220 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 AC005828.6-201ENST00000606610 232 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 AC021506.2-201ENST00000612354 169 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 MIR3674-201ENST00000636576 68 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 AC091812.1-201ENST00000432235 1948 ntBASIC0.99□□□□□ -2.25
LINC00477Q96M19 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.98□□□□□ -2.25
LINC00477Q96M19 MIR410-201ENST00000362222 80 ntBASIC0.98□□□□□ -2.25
LINC00477Q96M19 SNORA27.1-201ENST00000362604 124 ntBASIC0.98□□□□□ -2.25
LINC00477Q96M19 RNU6-414P-201ENST00000363705 104 ntBASIC0.98□□□□□ -2.25
LINC00477Q96M19 RNU6-407P-201ENST00000365280 104 ntBASIC0.98□□□□□ -2.25
LINC00477Q96M19 Y_RNA.361-201ENST00000365515 120 ntBASIC0.98□□□□□ -2.25
LINC00477Q96M19 RNU6-20P-201ENST00000384106 107 ntBASIC0.98□□□□□ -2.25
LINC00477Q96M19 SNORD116-13-201ENST00000384408 92 ntBASIC0.98□□□□□ -2.25
LINC00477Q96M19 Y_RNA.498-201ENST00000384460 102 ntBASIC0.98□□□□□ -2.25
LINC00477Q96M19 MIR1267-201ENST00000408723 78 ntBASIC0.98□□□□□ -2.25
LINC00477Q96M19 Y_RNA.604-201ENST00000410574 102 ntBASIC0.98□□□□□ -2.25
LINC00477Q96M19 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.98□□□□□ -2.25
LINC00477Q96M19 PMCHL1-202ENST00000423102 261 ntBASIC0.98□□□□□ -2.25
LINC00477Q96M19 TOMM22P2-201ENST00000430735 237 ntBASIC0.98□□□□□ -2.25
LINC00477Q96M19 AL591806.2-201ENST00000433122 173 ntBASIC0.98□□□□□ -2.25
LINC00477Q96M19 AC091021.1-201ENST00000468051 388 ntBASIC0.98□□□□□ -2.25
LINC00477Q96M19 RPS27P22-201ENST00000478056 241 ntBASIC0.98□□□□□ -2.25
LINC00477Q96M19 AC097462.1-201ENST00000514125 324 ntBASIC0.98□□□□□ -2.25
LINC00477Q96M19 RNU6-264P-201ENST00000517134 104 ntBASIC0.98□□□□□ -2.25
LINC00477Q96M19 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.98□□□□□ -2.25
LINC00477Q96M19 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.98□□□□□ -2.25
LINC00477Q96M19 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC0.98□□□□□ -2.25
LINC00477Q96M19 AC240442.1-201ENST00000616055 283 ntBASIC0.98□□□□□ -2.25
LINC00477Q96M19 MIR8054-201ENST00000620877 86 ntBASIC0.98□□□□□ -2.25
LINC00477Q96M19 MIR7843-201ENST00000622274 79 ntBASIC0.98□□□□□ -2.25
LINC00477Q96M19 SNORD81.1-201ENST00000363064 77 ntBASIC0.97□□□□□ -2.25
LINC00477Q96M19 Y_RNA.146-201ENST00000363549 102 ntBASIC0.97□□□□□ -2.25
LINC00477Q96M19 Y_RNA.148-201ENST00000363557 117 ntBASIC0.97□□□□□ -2.25
LINC00477Q96M19 RNU6-457P-201ENST00000363999 107 ntBASIC0.97□□□□□ -2.25
LINC00477Q96M19 Y_RNA.243-201ENST00000364481 109 ntBASIC0.97□□□□□ -2.25
LINC00477Q96M19 SNORA25.8-201ENST00000364831 128 ntBASIC0.97□□□□□ -2.25
LINC00477Q96M19 RNY3P4-201ENST00000384428 101 ntBASIC0.97□□□□□ -2.25
LINC00477Q96M19 SNORA11.2-201ENST00000408318 127 ntBASIC0.97□□□□□ -2.25
LINC00477Q96M19 Y_RNA.605-201ENST00000410577 105 ntBASIC0.97□□□□□ -2.25
LINC00477Q96M19 RNU2-7P-201ENST00000410794 178 ntBASIC0.97□□□□□ -2.25
LINC00477Q96M19 RPS27P16-201ENST00000425758 201 ntBASIC0.97□□□□□ -2.25
LINC00477Q96M19 FTH1P12-201ENST00000432137 551 ntBASIC0.97□□□□□ -2.25
LINC00477Q96M19 AC092473.1-201ENST00000441098 221 ntBASIC0.97□□□□□ -2.25
LINC00477Q96M19 snoU13.27-201ENST00000459278 104 ntBASIC0.97□□□□□ -2.25
LINC00477Q96M19 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.97□□□□□ -2.25
LINC00477Q96M19 RN7SKP179-201ENST00000516126 217 ntBASIC0.97□□□□□ -2.25
LINC00477Q96M19 RNU6-1291P-201ENST00000516591 104 ntBASIC0.97□□□□□ -2.25
LINC00477Q96M19 RNU6-307P-201ENST00000516743 106 ntBASIC0.97□□□□□ -2.25
LINC00477Q96M19 AC019176.1-201ENST00000518519 225 ntBASIC0.97□□□□□ -2.25
LINC00477Q96M19 AC015688.6-201ENST00000577737 104 ntBASIC0.97□□□□□ -2.25
LINC00477Q96M19 AC091178.2-201ENST00000584401 117 ntBASIC0.97□□□□□ -2.25
LINC00477Q96M19 AC022432.1-201ENST00000595739 310 ntBASIC0.97□□□□□ -2.25
LINC00477Q96M19 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.97□□□□□ -2.25
LINC00477Q96M19 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
LINC00477Q96M19 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.97□□□□□ -2.25
LINC00477Q96M19 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
LINC00477Q96M19 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
LINC00477Q96M19 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
LINC00477Q96M19 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
LINC00477Q96M19 Y_RNA.105-201ENST00000363182 111 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 RNU6-626P-201ENST00000363354 107 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 Y_RNA.197-201ENST00000364004 102 ntBASIC0.96□□□□□ -2.26
LINC00477Q96M19 Y_RNA.252-201ENST00000364556 101 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms