Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.47□□□□□ -2.64
VPS8Q8N3P4 MTCO1P5-201ENST00000433573 344 ntBASIC-1.47□□□□□ -2.64
VPS8Q8N3P4 POLR2KP2-201ENST00000438155 177 ntBASIC-1.47□□□□□ -2.64
VPS8Q8N3P4 RNU7-102P-201ENST00000458948 62 ntBASIC-1.47□□□□□ -2.64
VPS8Q8N3P4 AC008608.1-201ENST00000603910 127 ntBASIC-1.47□□□□□ -2.64
VPS8Q8N3P4 AC069545.1-201ENST00000605671 358 ntBASIC-1.47□□□□□ -2.64
VPS8Q8N3P4 AC012467.1-201ENST00000607740 256 ntBASIC-1.47□□□□□ -2.64
VPS8Q8N3P4 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-1.47□□□□□ -2.64
VPS8Q8N3P4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1.47□□□□□ -2.64
VPS8Q8N3P4 MIR148A-201ENST00000362215 68 ntBASIC-1.48□□□□□ -2.65
VPS8Q8N3P4 FCF1P9-201ENST00000412546 282 ntBASIC-1.48□□□□□ -2.65
VPS8Q8N3P4 MTCYBP42-201ENST00000444653 1130 ntBASIC-1.48□□□□□ -2.65
VPS8Q8N3P4 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.48□□□□□ -2.65
VPS8Q8N3P4 RNU6-1291P-201ENST00000516591 104 ntBASIC-1.48□□□□□ -2.65
VPS8Q8N3P4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-1.48□□□□□ -2.65
VPS8Q8N3P4 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.48□□□□□ -2.65
VPS8Q8N3P4 RPL21P9-201ENST00000556149 474 ntBASIC-1.48□□□□□ -2.65
VPS8Q8N3P4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-1.48□□□□□ -2.65
VPS8Q8N3P4 AC010525.2-201ENST00000590920 195 ntBASIC-1.48□□□□□ -2.65
VPS8Q8N3P4 AC125232.2-201ENST00000592457 143 ntBASIC-1.48□□□□□ -2.65
VPS8Q8N3P4 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-1.48□□□□□ -2.65
VPS8Q8N3P4 MTND5P17-201ENST00000418405 1603 ntBASIC-1.48□□□□□ -2.65
VPS8Q8N3P4 RNU6-1266P-201ENST00000362794 105 ntBASIC-1.49□□□□□ -2.65
VPS8Q8N3P4 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-1.49□□□□□ -2.65
VPS8Q8N3P4 MTND1P26-201ENST00000440488 538 ntBASIC-1.49□□□□□ -2.65
VPS8Q8N3P4 RNU6-448P-201ENST00000517052 107 ntBASIC-1.49□□□□□ -2.65
VPS8Q8N3P4 MIR3152-201ENST00000579801 74 ntBASIC-1.49□□□□□ -2.65
VPS8Q8N3P4 AP000753.3-201ENST00000604083 169 ntBASIC-1.49□□□□□ -2.65
VPS8Q8N3P4 RNU6-336P-201ENST00000364891 107 ntBASIC-1.49□□□□□ -2.65
VPS8Q8N3P4 RNU6-25P-201ENST00000383873 107 ntBASIC-1.49□□□□□ -2.65
VPS8Q8N3P4 SNORA51.10-201ENST00000384418 136 ntBASIC-1.49□□□□□ -2.65
VPS8Q8N3P4 RNU6-29P-201ENST00000384637 107 ntBASIC-1.49□□□□□ -2.65
VPS8Q8N3P4 MIR516B2-201ENST00000385190 85 ntBASIC-1.49□□□□□ -2.65
VPS8Q8N3P4 AP000907.4-201ENST00000604143 237 ntBASIC-1.49□□□□□ -2.65
VPS8Q8N3P4 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-1.5□□□□□ -2.65
VPS8Q8N3P4 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.5□□□□□ -2.65
VPS8Q8N3P4 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.5□□□□□ -2.65
VPS8Q8N3P4 MIR15B-201ENST00000385045 98 ntBASIC-1.5□□□□□ -2.65
VPS8Q8N3P4 AC243428.1-201ENST00000421099 264 ntBASIC-1.5□□□□□ -2.65
VPS8Q8N3P4 HLA-S-202ENST00000425174 53 ntBASIC-1.5□□□□□ -2.65
VPS8Q8N3P4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-1.5□□□□□ -2.65
VPS8Q8N3P4 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-1.5□□□□□ -2.65
VPS8Q8N3P4 AC021146.6-201ENST00000514659 117 ntBASIC-1.5□□□□□ -2.65
VPS8Q8N3P4 RNA5SP66-201ENST00000517178 101 ntBASIC-1.5□□□□□ -2.65
VPS8Q8N3P4 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.5□□□□□ -2.65
VPS8Q8N3P4 MIR4438-201ENST00000585271 93 ntBASIC-1.5□□□□□ -2.65
VPS8Q8N3P4 MIR6507-201ENST00000613630 70 ntBASIC-1.5□□□□□ -2.65
VPS8Q8N3P4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.5□□□□□ -2.65
VPS8Q8N3P4 RNY4P27-201ENST00000363341 96 ntBASIC-1.51□□□□□ -2.65
VPS8Q8N3P4 MIR501-201ENST00000390204 84 ntBASIC-1.51□□□□□ -2.65
VPS8Q8N3P4 MIR802-201ENST00000390235 94 ntBASIC-1.51□□□□□ -2.65
VPS8Q8N3P4 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.51□□□□□ -2.65
VPS8Q8N3P4 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.51□□□□□ -2.65
VPS8Q8N3P4 MIR3912-201ENST00000577566 105 ntBASIC-1.51□□□□□ -2.65
VPS8Q8N3P4 MIR544B-201ENST00000582372 78 ntBASIC-1.51□□□□□ -2.65
VPS8Q8N3P4 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.51□□□□□ -2.65
VPS8Q8N3P4 AC078880.5-201ENST00000617845 421 ntBASIC-1.51□□□□□ -2.65
VPS8Q8N3P4 AC091304.10-201ENST00000641554 121 ntBASIC-1.51□□□□□ -2.65
VPS8Q8N3P4 MIR377-201ENST00000362145 69 ntBASIC-1.52□□□□□ -2.65
VPS8Q8N3P4 SNORA1B-201ENST00000362535 133 ntBASIC-1.52□□□□□ -2.65
VPS8Q8N3P4 MT-TN-201ENST00000387400 73 ntBASIC-1.52□□□□□ -2.65
VPS8Q8N3P4 MTCO2P33-201ENST00000402100 465 ntBASIC-1.52□□□□□ -2.65
VPS8Q8N3P4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-1.52□□□□□ -2.65
VPS8Q8N3P4 PIGPP3-201ENST00000425307 415 ntBASIC-1.52□□□□□ -2.65
VPS8Q8N3P4 MTCO1P27-201ENST00000448269 226 ntBASIC-1.52□□□□□ -2.65
VPS8Q8N3P4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.52□□□□□ -2.65
VPS8Q8N3P4 AC140658.3-201ENST00000567603 271 ntBASIC-1.52□□□□□ -2.65
VPS8Q8N3P4 MIR3925-201ENST00000584674 77 ntBASIC-1.52□□□□□ -2.65
VPS8Q8N3P4 AC120024.3-201ENST00000603167 156 ntBASIC-1.52□□□□□ -2.65
VPS8Q8N3P4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.52□□□□□ -2.65
VPS8Q8N3P4 RNU6-511P-201ENST00000363496 107 ntBASIC-1.53□□□□□ -2.65
VPS8Q8N3P4 AL365184.2-201ENST00000431139 435 ntBASIC-1.53□□□□□ -2.65
VPS8Q8N3P4 ZNF114P1-201ENST00000453500 292 ntBASIC-1.53□□□□□ -2.65
VPS8Q8N3P4 SCARNA18B-201ENST00000458806 135 ntBASIC-1.53□□□□□ -2.65
VPS8Q8N3P4 MTND3P25-201ENST00000509243 135 ntBASIC-1.53□□□□□ -2.65
VPS8Q8N3P4 RNU6-341P-201ENST00000516973 96 ntBASIC-1.53□□□□□ -2.65
VPS8Q8N3P4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-1.53□□□□□ -2.65
VPS8Q8N3P4 AL355375.2-201ENST00000574825 175 ntBASIC-1.53□□□□□ -2.65
VPS8Q8N3P4 AP002802.2-201ENST00000605877 235 ntBASIC-1.53□□□□□ -2.65
VPS8Q8N3P4 AL139022.2-201ENST00000606934 443 ntBASIC-1.53□□□□□ -2.65
VPS8Q8N3P4 AC092574.1-201ENST00000609771 420 ntBASIC-1.53□□□□□ -2.65
VPS8Q8N3P4 RNU4-21P-201ENST00000362802 126 ntBASIC-1.54□□□□□ -2.66
VPS8Q8N3P4 Y_RNA.370-201ENST00000365589 108 ntBASIC-1.54□□□□□ -2.66
VPS8Q8N3P4 SNORA67.2-201ENST00000384300 149 ntBASIC-1.54□□□□□ -2.66
VPS8Q8N3P4 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.54□□□□□ -2.66
VPS8Q8N3P4 ELOCP21-201ENST00000412558 336 ntBASIC-1.54□□□□□ -2.66
VPS8Q8N3P4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-1.54□□□□□ -2.66
VPS8Q8N3P4 Z98949.2-201ENST00000440996 144 ntBASIC-1.54□□□□□ -2.66
VPS8Q8N3P4 MTCO3P8-201ENST00000453691 755 ntBASIC-1.54□□□□□ -2.66
VPS8Q8N3P4 AC091951.3-201ENST00000504093 246 ntBASIC-1.54□□□□□ -2.66
VPS8Q8N3P4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-1.54□□□□□ -2.66
VPS8Q8N3P4 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.54□□□□□ -2.66
VPS8Q8N3P4 AC138649.3-201ENST00000622154 254 ntBASIC-1.54□□□□□ -2.66
VPS8Q8N3P4 AP002782.1-201ENST00000623107 614 ntBASIC-1.54□□□□□ -2.66
VPS8Q8N3P4 RNU6-205P-201ENST00000390858 107 ntBASIC-1.55□□□□□ -2.66
VPS8Q8N3P4 SUMO1P3-201ENST00000439961 304 ntBASIC-1.55□□□□□ -2.66
VPS8Q8N3P4 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.55□□□□□ -2.66
VPS8Q8N3P4 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.55□□□□□ -2.66
VPS8Q8N3P4 MIR4752-201ENST00000579672 72 ntBASIC-1.55□□□□□ -2.66
VPS8Q8N3P4 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.56□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 210.6 ms