Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 MTCO2P11-201ENST00000431069 680 ntBASIC-0.57□□□□□ -2.5
APOC1P02654 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.57□□□□□ -2.5
APOC1P02654 AC104692.1-201ENST00000472406 90 ntBASIC-0.57□□□□□ -2.5
APOC1P02654 Y_RNA.672-201ENST00000516289 104 ntBASIC-0.57□□□□□ -2.5
APOC1P02654 AL358944.1-201ENST00000528537 144 ntBASIC-0.57□□□□□ -2.5
APOC1P02654 MIR4703-201ENST00000577728 79 ntBASIC-0.57□□□□□ -2.5
APOC1P02654 AC100830.2-201ENST00000581636 240 ntBASIC-0.57□□□□□ -2.5
APOC1P02654 AL359999.1-201ENST00000604513 294 ntBASIC-0.57□□□□□ -2.5
APOC1P02654 AC011921.3-201ENST00000605540 361 ntBASIC-0.57□□□□□ -2.5
APOC1P02654 RNU1-29P-201ENST00000606574 126 ntBASIC-0.57□□□□□ -2.5
APOC1P02654 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.57□□□□□ -2.5
APOC1P02654 AC013437.2-201ENST00000639587 677 ntBASIC-0.57□□□□□ -2.5
APOC1P02654 SNORA18.1-201ENST00000363418 128 ntBASIC-0.58□□□□□ -2.5
APOC1P02654 RNU6-873P-201ENST00000363833 107 ntBASIC-0.58□□□□□ -2.5
APOC1P02654 RNA5SP275-201ENST00000363936 118 ntBASIC-0.58□□□□□ -2.5
APOC1P02654 MIR1-2-201ENST00000384961 85 ntBASIC-0.58□□□□□ -2.5
APOC1P02654 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.58□□□□□ -2.5
APOC1P02654 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.58□□□□□ -2.5
APOC1P02654 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.58□□□□□ -2.5
APOC1P02654 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.58□□□□□ -2.5
APOC1P02654 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.58□□□□□ -2.5
APOC1P02654 SNORD27.1-201ENST00000516319 72 ntBASIC-0.58□□□□□ -2.5
APOC1P02654 RNU6-504P-201ENST00000516568 104 ntBASIC-0.58□□□□□ -2.5
APOC1P02654 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.58□□□□□ -2.5
APOC1P02654 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.58□□□□□ -2.5
APOC1P02654 AL158211.1-201ENST00000566763 763 ntBASIC-0.58□□□□□ -2.5
APOC1P02654 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.58□□□□□ -2.5
APOC1P02654 MIR4762-201ENST00000585261 75 ntBASIC-0.58□□□□□ -2.5
APOC1P02654 AC010608.3-201ENST00000625048 527 ntBASIC-0.58□□□□□ -2.5
APOC1P02654 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.58□□□□□ -2.5
APOC1P02654 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.59□□□□□ -2.5
APOC1P02654 RNY1P12-201ENST00000364251 105 ntBASIC-0.59□□□□□ -2.5
APOC1P02654 RNU4-9P-201ENST00000364951 139 ntBASIC-0.59□□□□□ -2.5
APOC1P02654 RNA5SP117-201ENST00000365294 118 ntBASIC-0.59□□□□□ -2.5
APOC1P02654 RNU6-157P-201ENST00000383957 107 ntBASIC-0.59□□□□□ -2.5
APOC1P02654 MTCO2P33-201ENST00000402100 465 ntBASIC-0.59□□□□□ -2.5
APOC1P02654 MTCO2P21-201ENST00000419780 677 ntBASIC-0.59□□□□□ -2.5
APOC1P02654 AC090844.1-201ENST00000422019 156 ntBASIC-0.59□□□□□ -2.5
APOC1P02654 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.59□□□□□ -2.5
APOC1P02654 AL137792.2-201ENST00000443484 235 ntBASIC-0.59□□□□□ -2.5
APOC1P02654 TRBVB-201ENST00000477100 408 ntBASIC-0.59□□□□□ -2.5
APOC1P02654 AC105417.1-201ENST00000514691 285 ntBASIC-0.59□□□□□ -2.5
APOC1P02654 RN7SKP287-201ENST00000516546 266 ntBASIC-0.59□□□□□ -2.5
APOC1P02654 AC069113.1-201ENST00000517763 267 ntBASIC-0.59□□□□□ -2.5
APOC1P02654 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-0.59□□□□□ -2.5
APOC1P02654 AL158211.2-201ENST00000607282 395 ntBASIC-0.59□□□□□ -2.5
APOC1P02654 AC006157.1-201ENST00000611750 366 ntBASIC-0.59□□□□□ -2.5
APOC1P02654 AC009878.1-201ENST00000621819 340 ntBASIC-0.59□□□□□ -2.5
APOC1P02654 SNORA27.1-201ENST00000362604 124 ntBASIC-0.6□□□□□ -2.51
APOC1P02654 RNU4-21P-201ENST00000362802 126 ntBASIC-0.6□□□□□ -2.51
APOC1P02654 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.6□□□□□ -2.51
APOC1P02654 MIR106A-201ENST00000384870 81 ntBASIC-0.6□□□□□ -2.51
APOC1P02654 MIR15B-201ENST00000385045 98 ntBASIC-0.6□□□□□ -2.51
APOC1P02654 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.6□□□□□ -2.51
APOC1P02654 RNU4-30P-201ENST00000410245 143 ntBASIC-0.6□□□□□ -2.51
APOC1P02654 AC096531.1-201ENST00000419107 107 ntBASIC-0.6□□□□□ -2.51
APOC1P02654 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.6□□□□□ -2.51
APOC1P02654 SUMO1P3-201ENST00000439961 304 ntBASIC-0.6□□□□□ -2.51
APOC1P02654 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.6□□□□□ -2.51
APOC1P02654 RNU7-167P-201ENST00000459160 62 ntBASIC-0.6□□□□□ -2.51
APOC1P02654 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.6□□□□□ -2.51
APOC1P02654 SNORA14.1-201ENST00000516113 141 ntBASIC-0.6□□□□□ -2.51
APOC1P02654 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.6□□□□□ -2.51
APOC1P02654 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.6□□□□□ -2.51
APOC1P02654 AC246785.4-201ENST00000605374 287 ntBASIC-0.6□□□□□ -2.51
APOC1P02654 AL158209.2-201ENST00000619266 216 ntBASIC-0.6□□□□□ -2.51
APOC1P02654 AC022306.3-201ENST00000619930 550 ntBASIC-0.6□□□□□ -2.51
APOC1P02654 SNORD38B-202ENST00000625943 69 ntBASIC-0.6□□□□□ -2.51
APOC1P02654 SNORA72.1-201ENST00000363485 129 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 SNORD115-8-201ENST00000363856 82 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 SNORD115-38-201ENST00000365037 82 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 RNU6-364P-201ENST00000384387 107 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 MIR125B2-201ENST00000385128 89 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 MIR802-201ENST00000390235 94 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 SNORA26.5-201ENST00000391215 123 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.61□□□□□ -2.51
APOC1P02654 MIR892B-201ENST00000401279 77 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 MTCO2P27-201ENST00000420740 428 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 SNRPGP10-201ENST00000432323 225 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 Z82188.1-201ENST00000436709 154 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 AC091959.1-201ENST00000495857 238 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 PRDX4P1-201ENST00000507189 574 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.61□□□□□ -2.51
APOC1P02654 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.61□□□□□ -2.51
APOC1P02654 SNORA18.4-201ENST00000516440 124 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 SNORD45.4-201ENST00000516629 73 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 RNA5SP54-201ENST00000516951 92 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 AC104576.1-201ENST00000524225 88 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 MTND4P33-201ENST00000556706 766 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 AC138869.1-201ENST00000568623 124 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 SNORD92-201ENST00000585078 85 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 AL133173.2-201ENST00000614270 90 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 AC027807.2-201ENST00000616099 408 ntBASIC-0.61□□□□□ -2.51
APOC1P02654 Y_RNA.110-201ENST00000363220 99 ntBASIC-0.62□□□□□ -2.51
APOC1P02654 RNU6-447P-201ENST00000410293 104 ntBASIC-0.62□□□□□ -2.51
APOC1P02654 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.62□□□□□ -2.51
APOC1P02654 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.62□□□□□ -2.51
APOC1P02654 RNU6-355P-201ENST00000410427 104 ntBASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms