Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 MIR892B-201ENST00000401279 77 ntBASIC-0.54□□□□□ -2.5
CCDC171Q6TFL3 AC243428.1-201ENST00000421099 264 ntBASIC-0.54□□□□□ -2.5
CCDC171Q6TFL3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.54□□□□□ -2.5
CCDC171Q6TFL3 AC079140.5-201ENST00000507882 310 ntBASIC-0.54□□□□□ -2.5
CCDC171Q6TFL3 AC010598.1-201ENST00000510378 103 ntBASIC-0.54□□□□□ -2.5
CCDC171Q6TFL3 RNU2-69P-201ENST00000516061 100 ntBASIC-0.54□□□□□ -2.5
CCDC171Q6TFL3 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.54□□□□□ -2.5
CCDC171Q6TFL3 MTND1P5-201ENST00000517906 940 ntBASIC-0.54□□□□□ -2.5
CCDC171Q6TFL3 MTND1P8-201ENST00000571424 950 ntBASIC-0.54□□□□□ -2.5
CCDC171Q6TFL3 AC090897.1-201ENST00000580909 226 ntBASIC-0.54□□□□□ -2.5
CCDC171Q6TFL3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.54□□□□□ -2.5
CCDC171Q6TFL3 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.54□□□□□ -2.5
CCDC171Q6TFL3 uc_338.22-201ENST00000622722 187 ntBASIC-0.54□□□□□ -2.5
CCDC171Q6TFL3 RNU4-73P-201ENST00000363164 141 ntBASIC-0.55□□□□□ -2.5
CCDC171Q6TFL3 RNY1P12-201ENST00000364251 105 ntBASIC-0.55□□□□□ -2.5
CCDC171Q6TFL3 RNA5SP368-201ENST00000364298 116 ntBASIC-0.55□□□□□ -2.5
CCDC171Q6TFL3 RNU6-533P-201ENST00000384144 107 ntBASIC-0.55□□□□□ -2.5
CCDC171Q6TFL3 AL355143.1-201ENST00000407101 841 ntBASIC-0.55□□□□□ -2.5
CCDC171Q6TFL3 MTND1P26-201ENST00000440488 538 ntBASIC-0.55□□□□□ -2.5
CCDC171Q6TFL3 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.55□□□□□ -2.5
CCDC171Q6TFL3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.55□□□□□ -2.5
CCDC171Q6TFL3 RN7SKP287-201ENST00000516546 266 ntBASIC-0.55□□□□□ -2.5
CCDC171Q6TFL3 MTND2P38-201ENST00000522536 667 ntBASIC-0.55□□□□□ -2.5
CCDC171Q6TFL3 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.55□□□□□ -2.5
CCDC171Q6TFL3 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.55□□□□□ -2.5
CCDC171Q6TFL3 AL355375.2-201ENST00000574825 175 ntBASIC-0.55□□□□□ -2.5
CCDC171Q6TFL3 RNU6-266P-201ENST00000364225 107 ntBASIC-0.56□□□□□ -2.5
CCDC171Q6TFL3 Y_RNA.302-201ENST00000364997 102 ntBASIC-0.56□□□□□ -2.5
CCDC171Q6TFL3 MIR454-201ENST00000390180 115 ntBASIC-0.56□□□□□ -2.5
CCDC171Q6TFL3 AL049545.1-201ENST00000401856 572 ntBASIC-0.56□□□□□ -2.5
CCDC171Q6TFL3 AL022718.1-201ENST00000412004 84 ntBASIC-0.56□□□□□ -2.5
CCDC171Q6TFL3 RPS27AP14-201ENST00000422868 454 ntBASIC-0.56□□□□□ -2.5
CCDC171Q6TFL3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.56□□□□□ -2.5
CCDC171Q6TFL3 RNU7-165P-201ENST00000458864 60 ntBASIC-0.56□□□□□ -2.5
CCDC171Q6TFL3 RNU7-159P-201ENST00000459284 62 ntBASIC-0.56□□□□□ -2.5
CCDC171Q6TFL3 SNORD123-201ENST00000459473 70 ntBASIC-0.56□□□□□ -2.5
CCDC171Q6TFL3 RNU6-63P-201ENST00000516690 95 ntBASIC-0.56□□□□□ -2.5
CCDC171Q6TFL3 AC087683.1-201ENST00000591187 441 ntBASIC-0.56□□□□□ -2.5
CCDC171Q6TFL3 AL670379.3-201ENST00000605040 251 ntBASIC-0.56□□□□□ -2.5
CCDC171Q6TFL3 RNU6-85P-201ENST00000605989 107 ntBASIC-0.56□□□□□ -2.5
CCDC171Q6TFL3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.56□□□□□ -2.5
CCDC171Q6TFL3 MTND4P9-201ENST00000507819 1346 ntBASIC-0.56□□□□□ -2.5
CCDC171Q6TFL3 SNORD68-201ENST00000363214 84 ntBASIC-0.57□□□□□ -2.5
CCDC171Q6TFL3 SNORD45.3-201ENST00000363836 72 ntBASIC-0.57□□□□□ -2.5
CCDC171Q6TFL3 RNA5SP117-201ENST00000365294 118 ntBASIC-0.57□□□□□ -2.5
CCDC171Q6TFL3 RNU6-169P-201ENST00000365336 107 ntBASIC-0.57□□□□□ -2.5
CCDC171Q6TFL3 AC117470.1-201ENST00000381974 330 ntBASIC-0.57□□□□□ -2.5
CCDC171Q6TFL3 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.57□□□□□ -2.5
CCDC171Q6TFL3 MIR604-201ENST00000384880 94 ntBASIC-0.57□□□□□ -2.5
CCDC171Q6TFL3 MIR938-201ENST00000401216 83 ntBASIC-0.57□□□□□ -2.5
CCDC171Q6TFL3 RNU6-757P-201ENST00000410334 100 ntBASIC-0.57□□□□□ -2.5
CCDC171Q6TFL3 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-0.57□□□□□ -2.5
CCDC171Q6TFL3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.57□□□□□ -2.5
CCDC171Q6TFL3 AC005042.3-201ENST00000453230 174 ntBASIC-0.57□□□□□ -2.5
CCDC171Q6TFL3 AC005178.1-201ENST00000508392 440 ntBASIC-0.57□□□□□ -2.5
CCDC171Q6TFL3 RNU6-276P-201ENST00000516114 96 ntBASIC-0.57□□□□□ -2.5
CCDC171Q6TFL3 AC010376.1-201ENST00000522101 334 ntBASIC-0.57□□□□□ -2.5
CCDC171Q6TFL3 AC026371.1-201ENST00000551867 419 ntBASIC-0.57□□□□□ -2.5
CCDC171Q6TFL3 AGGF1P4-201ENST00000568249 801 ntBASIC-0.57□□□□□ -2.5
CCDC171Q6TFL3 FGF7P1-201ENST00000582820 288 ntBASIC-0.57□□□□□ -2.5
CCDC171Q6TFL3 AC008608.1-201ENST00000603910 127 ntBASIC-0.57□□□□□ -2.5
CCDC171Q6TFL3 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.57□□□□□ -2.5
CCDC171Q6TFL3 MIR499B-201ENST00000636498 73 ntBASIC-0.57□□□□□ -2.5
CCDC171Q6TFL3 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.58□□□□□ -2.5
CCDC171Q6TFL3 MTATP6P20-201ENST00000414147 562 ntBASIC-0.58□□□□□ -2.5
CCDC171Q6TFL3 AL390729.2-201ENST00000416137 156 ntBASIC-0.58□□□□□ -2.5
CCDC171Q6TFL3 MTND3P9-201ENST00000429526 346 ntBASIC-0.58□□□□□ -2.5
CCDC171Q6TFL3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-0.58□□□□□ -2.5
CCDC171Q6TFL3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.58□□□□□ -2.5
CCDC171Q6TFL3 AF186996.7-201ENST00000492781 209 ntBASIC-0.58□□□□□ -2.5
CCDC171Q6TFL3 RNU6-782P-201ENST00000516852 104 ntBASIC-0.58□□□□□ -2.5
CCDC171Q6TFL3 AC069113.1-201ENST00000517763 267 ntBASIC-0.58□□□□□ -2.5
CCDC171Q6TFL3 MTND2P32-201ENST00000521584 1038 ntBASIC-0.58□□□□□ -2.5
CCDC171Q6TFL3 AL358944.1-201ENST00000528537 144 ntBASIC-0.58□□□□□ -2.5
CCDC171Q6TFL3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.58□□□□□ -2.5
CCDC171Q6TFL3 AC133485.4-201ENST00000561835 220 ntBASIC-0.58□□□□□ -2.5
CCDC171Q6TFL3 MIR4775-201ENST00000581168 75 ntBASIC-0.58□□□□□ -2.5
CCDC171Q6TFL3 AL359999.1-201ENST00000604513 294 ntBASIC-0.58□□□□□ -2.5
CCDC171Q6TFL3 MIR8064-201ENST00000612863 90 ntBASIC-0.58□□□□□ -2.5
CCDC171Q6TFL3 AC104010.1-201ENST00000616889 150 ntBASIC-0.58□□□□□ -2.5
CCDC171Q6TFL3 AC009159.2-201ENST00000617603 606 ntBASIC-0.58□□□□□ -2.5
CCDC171Q6TFL3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.58□□□□□ -2.5
CCDC171Q6TFL3 SNORA1.1-201ENST00000364671 133 ntBASIC-0.59□□□□□ -2.5
CCDC171Q6TFL3 RNU6-376P-201ENST00000384731 106 ntBASIC-0.59□□□□□ -2.5
CCDC171Q6TFL3 MIR760-201ENST00000390220 80 ntBASIC-0.59□□□□□ -2.5
CCDC171Q6TFL3 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.59□□□□□ -2.5
CCDC171Q6TFL3 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.59□□□□□ -2.5
CCDC171Q6TFL3 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.59□□□□□ -2.5
CCDC171Q6TFL3 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.59□□□□□ -2.5
CCDC171Q6TFL3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.59□□□□□ -2.5
CCDC171Q6TFL3 SUMO1P2-201ENST00000452524 304 ntBASIC-0.59□□□□□ -2.5
CCDC171Q6TFL3 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-0.59□□□□□ -2.5
CCDC171Q6TFL3 RNU6-848P-201ENST00000515948 107 ntBASIC-0.59□□□□□ -2.5
CCDC171Q6TFL3 RNU6-617P-201ENST00000516147 107 ntBASIC-0.59□□□□□ -2.5
CCDC171Q6TFL3 RNU6-473P-201ENST00000516164 107 ntBASIC-0.59□□□□□ -2.5
CCDC171Q6TFL3 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.59□□□□□ -2.5
CCDC171Q6TFL3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.59□□□□□ -2.5
CCDC171Q6TFL3 SNORA20.2-201ENST00000383922 131 ntBASIC-0.6□□□□□ -2.5
CCDC171Q6TFL3 RNU6-245P-201ENST00000384020 107 ntBASIC-0.6□□□□□ -2.5
CCDC171Q6TFL3 RNU6-187P-201ENST00000384139 106 ntBASIC-0.6□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 212.4 ms