Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC091021.1-201ENST00000468051 388 ntBASIC0.69□□□□□ -2.3
AP3B1O00203 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.69□□□□□ -2.3
AP3B1O00203 RNU7-175P-201ENST00000515915 61 ntBASIC0.69□□□□□ -2.3
AP3B1O00203 RNU7-12P-201ENST00000516030 62 ntBASIC0.69□□□□□ -2.3
AP3B1O00203 RNU6-107P-201ENST00000516643 102 ntBASIC0.69□□□□□ -2.3
AP3B1O00203 RNU6-341P-201ENST00000516973 96 ntBASIC0.69□□□□□ -2.3
AP3B1O00203 RPL21P9-201ENST00000556149 474 ntBASIC0.69□□□□□ -2.3
AP3B1O00203 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.69□□□□□ -2.3
AP3B1O00203 AL590095.2-201ENST00000604136 117 ntBASIC0.69□□□□□ -2.3
AP3B1O00203 AC092954.2-201ENST00000609103 430 ntBASIC0.69□□□□□ -2.3
AP3B1O00203 SNORA1B-201ENST00000362535 133 ntBASIC0.68□□□□□ -2.3
AP3B1O00203 Y_RNA.212-201ENST00000364177 102 ntBASIC0.68□□□□□ -2.3
AP3B1O00203 Y_RNA.267-201ENST00000364679 109 ntBASIC0.68□□□□□ -2.3
AP3B1O00203 SNORD116-9-201ENST00000384000 95 ntBASIC0.68□□□□□ -2.3
AP3B1O00203 SNORD116-3-201ENST00000384287 95 ntBASIC0.68□□□□□ -2.3
AP3B1O00203 SNORD116-7-201ENST00000384404 95 ntBASIC0.68□□□□□ -2.3
AP3B1O00203 SNORD116-5-201ENST00000384462 95 ntBASIC0.68□□□□□ -2.3
AP3B1O00203 MIR605-201ENST00000385078 83 ntBASIC0.68□□□□□ -2.3
AP3B1O00203 AC104332.1-201ENST00000440471 797 ntBASIC0.68□□□□□ -2.3
AP3B1O00203 Y_RNA.683-201ENST00000516508 93 ntBASIC0.68□□□□□ -2.3
AP3B1O00203 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.68□□□□□ -2.3
AP3B1O00203 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.68□□□□□ -2.3
AP3B1O00203 AL117336.2-201ENST00000602435 335 ntBASIC0.68□□□□□ -2.3
AP3B1O00203 PRELID3BP2-201ENST00000605362 201 ntBASIC0.68□□□□□ -2.3
AP3B1O00203 AL353765.1-201ENST00000605514 183 ntBASIC0.68□□□□□ -2.3
AP3B1O00203 MIRLET7C-201ENST00000362160 84 ntBASIC0.67□□□□□ -2.3
AP3B1O00203 RNU4-12P-201ENST00000365233 139 ntBASIC0.67□□□□□ -2.3
AP3B1O00203 Y_RNA.405-201ENST00000383979 100 ntBASIC0.67□□□□□ -2.3
AP3B1O00203 Y_RNA.451-201ENST00000384200 100 ntBASIC0.67□□□□□ -2.3
AP3B1O00203 RNU6-281P-201ENST00000384212 103 ntBASIC0.67□□□□□ -2.3
AP3B1O00203 Y_RNA.524-201ENST00000384564 100 ntBASIC0.67□□□□□ -2.3
AP3B1O00203 Y_RNA.533-201ENST00000384596 114 ntBASIC0.67□□□□□ -2.3
AP3B1O00203 Y_RNA.561-201ENST00000384694 100 ntBASIC0.67□□□□□ -2.3
AP3B1O00203 SNORA75.2-201ENST00000391138 150 ntBASIC0.67□□□□□ -2.3
AP3B1O00203 SNORA75.3-201ENST00000391231 150 ntBASIC0.67□□□□□ -2.3
AP3B1O00203 RNU6-733P-201ENST00000410759 104 ntBASIC0.67□□□□□ -2.3
AP3B1O00203 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.67□□□□□ -2.3
AP3B1O00203 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.67□□□□□ -2.3
AP3B1O00203 COX6CP6-201ENST00000490840 228 ntBASIC0.67□□□□□ -2.3
AP3B1O00203 AC018710.1-201ENST00000506509 158 ntBASIC0.67□□□□□ -2.3
AP3B1O00203 AP002004.2-201ENST00000531656 154 ntBASIC0.67□□□□□ -2.3
AP3B1O00203 MIR4781-201ENST00000585250 76 ntBASIC0.67□□□□□ -2.3
AP3B1O00203 AC245008.1-201ENST00000608123 476 ntBASIC0.67□□□□□ -2.3
AP3B1O00203 AC004832.4-201ENST00000608952 331 ntBASIC0.67□□□□□ -2.3
AP3B1O00203 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.67□□□□□ -2.3
AP3B1O00203 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
AP3B1O00203 AC023934.1-201ENST00000574529 2389 ntBASIC0.67□□□□□ -2.3
AP3B1O00203 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
AP3B1O00203 RNU6-222P-201ENST00000362438 107 ntBASIC0.66□□□□□ -2.3
AP3B1O00203 RNU6-451P-201ENST00000362921 107 ntBASIC0.66□□□□□ -2.3
AP3B1O00203 SNORD116-11-201ENST00000383882 92 ntBASIC0.66□□□□□ -2.3
AP3B1O00203 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
AP3B1O00203 RNA5SP482-201ENST00000391269 118 ntBASIC0.66□□□□□ -2.3
AP3B1O00203 RNU1-139P-201ENST00000391307 165 ntBASIC0.66□□□□□ -2.3
AP3B1O00203 MTND3P23-201ENST00000431980 347 ntBASIC0.66□□□□□ -2.3
AP3B1O00203 AC245047.8-201ENST00000456455 284 ntBASIC0.66□□□□□ -2.3
AP3B1O00203 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.66□□□□□ -2.3
AP3B1O00203 RNU6-1114P-201ENST00000516022 107 ntBASIC0.66□□□□□ -2.3
AP3B1O00203 Y_RNA.688-201ENST00000516565 95 ntBASIC0.66□□□□□ -2.3
AP3B1O00203 NBR2-204ENST00000587322 63 ntBASIC0.66□□□□□ -2.3
AP3B1O00203 AL096861.1-201ENST00000610899 123 ntBASIC0.66□□□□□ -2.3
AP3B1O00203 RNY3P3-201ENST00000363816 102 ntBASIC0.65□□□□□ -2.31
AP3B1O00203 RNU6-596P-201ENST00000365395 98 ntBASIC0.65□□□□□ -2.31
AP3B1O00203 Y_RNA.414-201ENST00000384011 101 ntBASIC0.65□□□□□ -2.31
AP3B1O00203 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.65□□□□□ -2.31
AP3B1O00203 AC018865.2-201ENST00000423631 129 ntBASIC0.65□□□□□ -2.31
AP3B1O00203 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.65□□□□□ -2.31
AP3B1O00203 snoU13.25-201ENST00000458945 104 ntBASIC0.65□□□□□ -2.31
AP3B1O00203 AL049830.1-201ENST00000468034 425 ntBASIC0.65□□□□□ -2.31
AP3B1O00203 AC117454.1-201ENST00000491120 168 ntBASIC0.65□□□□□ -2.31
AP3B1O00203 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.65□□□□□ -2.31
AP3B1O00203 AC046134.1-201ENST00000514454 666 ntBASIC0.65□□□□□ -2.31
AP3B1O00203 RNA5SP20-201ENST00000515976 84 ntBASIC0.65□□□□□ -2.31
AP3B1O00203 RNU6-273P-201ENST00000516937 96 ntBASIC0.65□□□□□ -2.31
AP3B1O00203 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.65□□□□□ -2.31
AP3B1O00203 AC004817.2-201ENST00000561794 651 ntBASIC0.65□□□□□ -2.31
AP3B1O00203 AC136443.5-201ENST00000603741 370 ntBASIC0.65□□□□□ -2.31
AP3B1O00203 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.65□□□□□ -2.31
AP3B1O00203 ZNF299P-201ENST00000406845 1804 ntBASIC0.64□□□□□ -2.31
AP3B1O00203 SNORA27.1-201ENST00000362604 124 ntBASIC0.64□□□□□ -2.31
AP3B1O00203 Y_RNA.38-201ENST00000362617 102 ntBASIC0.64□□□□□ -2.31
AP3B1O00203 RNU6-595P-201ENST00000363944 107 ntBASIC0.64□□□□□ -2.31
AP3B1O00203 RNU6-407P-201ENST00000365280 104 ntBASIC0.64□□□□□ -2.31
AP3B1O00203 RNU6-376P-201ENST00000384731 106 ntBASIC0.64□□□□□ -2.31
AP3B1O00203 RNU6-332P-201ENST00000391193 108 ntBASIC0.64□□□□□ -2.31
AP3B1O00203 MIR1276-201ENST00000408707 83 ntBASIC0.64□□□□□ -2.31
AP3B1O00203 USMG5P1-201ENST00000425964 177 ntBASIC0.64□□□□□ -2.31
AP3B1O00203 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.64□□□□□ -2.31
AP3B1O00203 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.64□□□□□ -2.31
AP3B1O00203 RNA5SP121-201ENST00000516537 101 ntBASIC0.64□□□□□ -2.31
AP3B1O00203 RNU6-1291P-201ENST00000516591 104 ntBASIC0.64□□□□□ -2.31
AP3B1O00203 RNU6-1116P-201ENST00000517269 99 ntBASIC0.64□□□□□ -2.31
AP3B1O00203 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.64□□□□□ -2.31
AP3B1O00203 AC093023.1-201ENST00000547375 507 ntBASIC0.64□□□□□ -2.31
AP3B1O00203 MIR3684-201ENST00000579779 74 ntBASIC0.64□□□□□ -2.31
AP3B1O00203 MIR4273-201ENST00000582824 84 ntBASIC0.64□□□□□ -2.31
AP3B1O00203 AL391903.3-201ENST00000612158 163 ntBASIC0.64□□□□□ -2.31
AP3B1O00203 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
AP3B1O00203 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
AP3B1O00203 RNU6-1059P-201ENST00000363752 98 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms