Protein–RNA interactions for Protein: Q96NT0

CCDC115, Coiled-coil domain-containing protein 115, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115Q96NT0 RNU2-69P-201ENST00000516061 100 ntBASIC-0.5□□□□□ -2.49
CCDC115Q96NT0 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.5□□□□□ -2.49
CCDC115Q96NT0 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.5□□□□□ -2.49
CCDC115Q96NT0 RNU6-612P-201ENST00000516909 102 ntBASIC-0.5□□□□□ -2.49
CCDC115Q96NT0 AL158211.1-201ENST00000566763 763 ntBASIC-0.5□□□□□ -2.49
CCDC115Q96NT0 MIR4804-201ENST00000581683 73 ntBASIC-0.5□□□□□ -2.49
CCDC115Q96NT0 BNIP3P39-201ENST00000601077 554 ntBASIC-0.5□□□□□ -2.49
CCDC115Q96NT0 uc_338.6-201ENST00000613544 171 ntBASIC-0.5□□□□□ -2.49
CCDC115Q96NT0 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.51□□□□□ -2.49
CCDC115Q96NT0 RNU6-929P-201ENST00000384429 107 ntBASIC-0.51□□□□□ -2.49
CCDC115Q96NT0 MIR136-201ENST00000385207 82 ntBASIC-0.51□□□□□ -2.49
CCDC115Q96NT0 SNORD100-201ENST00000408573 76 ntBASIC-0.51□□□□□ -2.49
CCDC115Q96NT0 RNU6-757P-201ENST00000410334 100 ntBASIC-0.51□□□□□ -2.49
CCDC115Q96NT0 PIGPP3-201ENST00000425307 415 ntBASIC-0.51□□□□□ -2.49
CCDC115Q96NT0 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.51□□□□□ -2.49
CCDC115Q96NT0 MTND2P38-201ENST00000522536 667 ntBASIC-0.51□□□□□ -2.49
CCDC115Q96NT0 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.51□□□□□ -2.49
CCDC115Q96NT0 MIR3941-201ENST00000582572 103 ntBASIC-0.51□□□□□ -2.49
CCDC115Q96NT0 AC012433.1-201ENST00000588916 398 ntBASIC-0.51□□□□□ -2.49
CCDC115Q96NT0 AC240442.1-201ENST00000616055 283 ntBASIC-0.51□□□□□ -2.49
CCDC115Q96NT0 AC137590.2-201ENST00000619709 240 ntBASIC-0.51□□□□□ -2.49
CCDC115Q96NT0 RNU6-934P-201ENST00000365154 107 ntBASIC-0.52□□□□□ -2.49
CCDC115Q96NT0 MIR643-201ENST00000385267 97 ntBASIC-0.52□□□□□ -2.49
CCDC115Q96NT0 RNU6-127P-201ENST00000390897 107 ntBASIC-0.52□□□□□ -2.49
CCDC115Q96NT0 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-0.52□□□□□ -2.49
CCDC115Q96NT0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.52□□□□□ -2.49
CCDC115Q96NT0 RPS29P27-201ENST00000463711 170 ntBASIC-0.52□□□□□ -2.49
CCDC115Q96NT0 AC107401.1-201ENST00000503426 685 ntBASIC-0.52□□□□□ -2.49
CCDC115Q96NT0 RNU6-320P-201ENST00000516511 106 ntBASIC-0.52□□□□□ -2.49
CCDC115Q96NT0 AC105185.1-201ENST00000518705 535 ntBASIC-0.52□□□□□ -2.49
CCDC115Q96NT0 MRPS36P4-201ENST00000534436 298 ntBASIC-0.52□□□□□ -2.49
CCDC115Q96NT0 SNORD114-28-201ENST00000363610 72 ntBASIC-0.53□□□□□ -2.49
CCDC115Q96NT0 RNU6-245P-201ENST00000384020 107 ntBASIC-0.53□□□□□ -2.49
CCDC115Q96NT0 MIR516B2-201ENST00000385190 85 ntBASIC-0.53□□□□□ -2.49
CCDC115Q96NT0 SNORD70.1-201ENST00000391007 85 ntBASIC-0.53□□□□□ -2.49
CCDC115Q96NT0 MIR892B-201ENST00000401279 77 ntBASIC-0.53□□□□□ -2.49
CCDC115Q96NT0 AL355143.1-201ENST00000407101 841 ntBASIC-0.53□□□□□ -2.49
CCDC115Q96NT0 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.53□□□□□ -2.49
CCDC115Q96NT0 RNU4-46P-201ENST00000410818 138 ntBASIC-0.53□□□□□ -2.49
CCDC115Q96NT0 AC098592.1-201ENST00000419352 333 ntBASIC-0.53□□□□□ -2.49
CCDC115Q96NT0 AC243428.1-201ENST00000421099 264 ntBASIC-0.53□□□□□ -2.49
CCDC115Q96NT0 EPS15P1-201ENST00000448836 336 ntBASIC-0.53□□□□□ -2.49
CCDC115Q96NT0 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.53□□□□□ -2.49
CCDC115Q96NT0 RNU7-56P-201ENST00000458744 62 ntBASIC-0.53□□□□□ -2.49
CCDC115Q96NT0 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.53□□□□□ -2.49
CCDC115Q96NT0 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.53□□□□□ -2.49
CCDC115Q96NT0 SNORA18.7-201ENST00000516910 131 ntBASIC-0.53□□□□□ -2.49
CCDC115Q96NT0 RNU6-1220P-201ENST00000517126 108 ntBASIC-0.53□□□□□ -2.49
CCDC115Q96NT0 MTND1P5-201ENST00000517906 940 ntBASIC-0.53□□□□□ -2.49
CCDC115Q96NT0 AL358944.1-201ENST00000528537 144 ntBASIC-0.53□□□□□ -2.49
CCDC115Q96NT0 AC009159.2-201ENST00000617603 606 ntBASIC-0.53□□□□□ -2.49
CCDC115Q96NT0 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.53□□□□□ -2.49
CCDC115Q96NT0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
CCDC115Q96NT0 RNU6-931P-201ENST00000363850 107 ntBASIC-0.54□□□□□ -2.5
CCDC115Q96NT0 SNORD87-201ENST00000364849 89 ntBASIC-0.54□□□□□ -2.5
CCDC115Q96NT0 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.54□□□□□ -2.5
CCDC115Q96NT0 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-0.54□□□□□ -2.5
CCDC115Q96NT0 AC079781.2-201ENST00000446424 169 ntBASIC-0.54□□□□□ -2.5
CCDC115Q96NT0 AC114811.1-201ENST00000507207 168 ntBASIC-0.54□□□□□ -2.5
CCDC115Q96NT0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.54□□□□□ -2.5
CCDC115Q96NT0 AC104010.1-201ENST00000616889 150 ntBASIC-0.54□□□□□ -2.5
CCDC115Q96NT0 MIR4251-201ENST00000635819 61 ntBASIC-0.54□□□□□ -2.5
CCDC115Q96NT0 MTND4P9-201ENST00000507819 1346 ntBASIC-0.55□□□□□ -2.5
CCDC115Q96NT0 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.55□□□□□ -2.5
CCDC115Q96NT0 SNORA20.2-201ENST00000383922 131 ntBASIC-0.55□□□□□ -2.5
CCDC115Q96NT0 SNORA8.3-201ENST00000384679 139 ntBASIC-0.55□□□□□ -2.5
CCDC115Q96NT0 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.55□□□□□ -2.5
CCDC115Q96NT0 RNU6-747P-201ENST00000390928 104 ntBASIC-0.55□□□□□ -2.5
CCDC115Q96NT0 RNU6-241P-201ENST00000391148 104 ntBASIC-0.55□□□□□ -2.5
CCDC115Q96NT0 SNORD4A-201ENST00000459174 72 ntBASIC-0.55□□□□□ -2.5
CCDC115Q96NT0 snoU13.21-201ENST00000459368 105 ntBASIC-0.55□□□□□ -2.5
CCDC115Q96NT0 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.55□□□□□ -2.5
CCDC115Q96NT0 AC010598.1-201ENST00000510378 103 ntBASIC-0.55□□□□□ -2.5
CCDC115Q96NT0 RPL39P5-202ENST00000512505 151 ntBASIC-0.55□□□□□ -2.5
CCDC115Q96NT0 MIR4771-2-201ENST00000577758 74 ntBASIC-0.55□□□□□ -2.5
CCDC115Q96NT0 MIR4771-1-201ENST00000582617 74 ntBASIC-0.55□□□□□ -2.5
CCDC115Q96NT0 RNU6-85P-201ENST00000605989 107 ntBASIC-0.55□□□□□ -2.5
CCDC115Q96NT0 RMST_3.1-201ENST00000611651 109 ntBASIC-0.55□□□□□ -2.5
CCDC115Q96NT0 MIR6755-201ENST00000619993 66 ntBASIC-0.55□□□□□ -2.5
CCDC115Q96NT0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.55□□□□□ -2.5
CCDC115Q96NT0 RNU6-580P-201ENST00000365159 107 ntBASIC-0.56□□□□□ -2.5
CCDC115Q96NT0 RNU6-396P-201ENST00000365369 105 ntBASIC-0.56□□□□□ -2.5
CCDC115Q96NT0 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.56□□□□□ -2.5
CCDC115Q96NT0 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.56□□□□□ -2.5
CCDC115Q96NT0 AF186996.7-201ENST00000492781 209 ntBASIC-0.56□□□□□ -2.5
CCDC115Q96NT0 AC091951.3-201ENST00000504093 246 ntBASIC-0.56□□□□□ -2.5
CCDC115Q96NT0 MTND2P32-201ENST00000521584 1038 ntBASIC-0.56□□□□□ -2.5
CCDC115Q96NT0 MTCO3P23-201ENST00000561363 289 ntBASIC-0.56□□□□□ -2.5
CCDC115Q96NT0 AGGF1P4-201ENST00000568249 801 ntBASIC-0.56□□□□□ -2.5
CCDC115Q96NT0 FGF7P1-201ENST00000582820 288 ntBASIC-0.56□□□□□ -2.5
CCDC115Q96NT0 MIR4676-201ENST00000583078 72 ntBASIC-0.56□□□□□ -2.5
CCDC115Q96NT0 AC005176.2-201ENST00000596933 147 ntBASIC-0.56□□□□□ -2.5
CCDC115Q96NT0 AC138749.5-201ENST00000611461 208 ntBASIC-0.56□□□□□ -2.5
CCDC115Q96NT0 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.56□□□□□ -2.5
CCDC115Q96NT0 AC098679.4-201ENST00000624241 654 ntBASIC-0.56□□□□□ -2.5
CCDC115Q96NT0 MIR377-201ENST00000362145 69 ntBASIC-0.57□□□□□ -2.5
CCDC115Q96NT0 RNA5SP275-201ENST00000363936 118 ntBASIC-0.57□□□□□ -2.5
CCDC115Q96NT0 RNU6-169P-201ENST00000365336 107 ntBASIC-0.57□□□□□ -2.5
CCDC115Q96NT0 Y_RNA.367-201ENST00000365544 101 ntBASIC-0.57□□□□□ -2.5
CCDC115Q96NT0 RNU6-756P-201ENST00000383997 107 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms