Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 AC005176.2-201ENST00000596933 147 ntBASIC-0.41□□□□□ -2.48
TRAV17A0A0B4J275 AL360085.1-201ENST00000604713 532 ntBASIC-0.41□□□□□ -2.48
TRAV17A0A0B4J275 AC080013.3-201ENST00000606839 578 ntBASIC-0.41□□□□□ -2.48
TRAV17A0A0B4J275 AC138749.5-201ENST00000611461 208 ntBASIC-0.41□□□□□ -2.48
TRAV17A0A0B4J275 AC104010.1-201ENST00000616889 150 ntBASIC-0.41□□□□□ -2.48
TRAV17A0A0B4J275 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC-0.41□□□□□ -2.48
TRAV17A0A0B4J275 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.42□□□□□ -2.48
TRAV17A0A0B4J275 RNU6-934P-201ENST00000365154 107 ntBASIC-0.42□□□□□ -2.48
TRAV17A0A0B4J275 SNORD14.1-201ENST00000365609 90 ntBASIC-0.42□□□□□ -2.48
TRAV17A0A0B4J275 RNU6-809P-201ENST00000384461 107 ntBASIC-0.42□□□□□ -2.48
TRAV17A0A0B4J275 MIR452-201ENST00000385020 85 ntBASIC-0.42□□□□□ -2.48
TRAV17A0A0B4J275 MIR1298-201ENST00000408783 112 ntBASIC-0.42□□□□□ -2.48
TRAV17A0A0B4J275 AC119618.1-201ENST00000434191 222 ntBASIC-0.42□□□□□ -2.48
TRAV17A0A0B4J275 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.42□□□□□ -2.48
TRAV17A0A0B4J275 AC079781.2-201ENST00000446424 169 ntBASIC-0.42□□□□□ -2.48
TRAV17A0A0B4J275 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.42□□□□□ -2.48
TRAV17A0A0B4J275 AC091133.4-201ENST00000511142 308 ntBASIC-0.42□□□□□ -2.48
TRAV17A0A0B4J275 AC097462.1-201ENST00000514125 324 ntBASIC-0.42□□□□□ -2.48
TRAV17A0A0B4J275 RNU4-49P-201ENST00000516080 140 ntBASIC-0.42□□□□□ -2.48
TRAV17A0A0B4J275 RNU6-758P-201ENST00000516292 89 ntBASIC-0.42□□□□□ -2.48
TRAV17A0A0B4J275 RNU7-43P-201ENST00000516554 64 ntBASIC-0.42□□□□□ -2.48
TRAV17A0A0B4J275 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 RNA5SP494-201ENST00000410653 129 ntBASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 RNU4-46P-201ENST00000410818 138 ntBASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 SNORD65B-201ENST00000459126 73 ntBASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 SNORD4A-201ENST00000459174 72 ntBASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 AC112204.1-201ENST00000502591 103 ntBASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 RPL39P5-202ENST00000512505 151 ntBASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 RNU6-63P-201ENST00000516690 95 ntBASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 RNA5SP268-201ENST00000516828 124 ntBASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 SNORA18.7-201ENST00000516910 131 ntBASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 AC022616.3-201ENST00000523940 148 ntBASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 MRPS36P4-201ENST00000534436 298 ntBASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 MIR4771-2-201ENST00000577758 74 ntBASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 MIR4771-1-201ENST00000582617 74 ntBASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 BNIP3P40-201ENST00000596017 556 ntBASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 BNIP3P39-201ENST00000601077 554 ntBASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 AC120024.3-201ENST00000603167 156 ntBASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 AC092447.9-201ENST00000603395 144 ntBASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 AC020891.4-201ENST00000605745 93 ntBASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 uc_338.22-201ENST00000622722 187 ntBASIC-0.43□□□□□ -2.48
TRAV17A0A0B4J275 SNORD87-201ENST00000364849 89 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 RNU6-187P-201ENST00000384139 106 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 MIR487A-201ENST00000385009 80 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 AL022718.1-201ENST00000412004 84 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 MTATP6P20-201ENST00000414147 562 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 MTCO3P19-201ENST00000415864 321 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 ELOCP4-201ENST00000420090 333 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 HMGN2P22-201ENST00000427588 175 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 BTBD7P2-201ENST00000441962 620 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 MTCO2P3-201ENST00000442543 421 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 AC005042.3-201ENST00000453230 174 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 AC091951.3-201ENST00000504093 246 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 RNU2-69P-201ENST00000516061 100 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 RNU6-320P-201ENST00000516511 106 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 RNU6-1220P-201ENST00000517126 108 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 MTND1P5-201ENST00000517906 940 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 HIF1AP1-201ENST00000553642 175 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 MIR4676-201ENST00000583078 72 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 AC008608.1-201ENST00000603910 127 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 AC002044.1-201ENST00000606707 158 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 SNORD11B-201ENST00000607707 90 ntBASIC-0.44□□□□□ -2.48
TRAV17A0A0B4J275 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.45□□□□□ -2.48
TRAV17A0A0B4J275 RNU4-73P-201ENST00000363164 141 ntBASIC-0.45□□□□□ -2.48
TRAV17A0A0B4J275 SNORD45.3-201ENST00000363836 72 ntBASIC-0.45□□□□□ -2.48
TRAV17A0A0B4J275 RNU6-925P-201ENST00000384629 104 ntBASIC-0.45□□□□□ -2.48
TRAV17A0A0B4J275 AL049545.1-201ENST00000401856 572 ntBASIC-0.45□□□□□ -2.48
TRAV17A0A0B4J275 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.45□□□□□ -2.48
TRAV17A0A0B4J275 SUMO1P2-201ENST00000452524 304 ntBASIC-0.45□□□□□ -2.48
TRAV17A0A0B4J275 AC104692.1-201ENST00000472406 90 ntBASIC-0.45□□□□□ -2.48
TRAV17A0A0B4J275 AC114811.1-201ENST00000507207 168 ntBASIC-0.45□□□□□ -2.48
TRAV17A0A0B4J275 AC079140.5-201ENST00000507882 310 ntBASIC-0.45□□□□□ -2.48
TRAV17A0A0B4J275 SCARNA8-201ENST00000515924 131 ntBASIC-0.45□□□□□ -2.48
TRAV17A0A0B4J275 MIR2115-201ENST00000516657 100 ntBASIC-0.45□□□□□ -2.48
TRAV17A0A0B4J275 AL358944.1-201ENST00000528537 144 ntBASIC-0.45□□□□□ -2.48
TRAV17A0A0B4J275 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-0.45□□□□□ -2.48
TRAV17A0A0B4J275 AC133485.4-201ENST00000561835 220 ntBASIC-0.45□□□□□ -2.48
TRAV17A0A0B4J275 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.45□□□□□ -2.48
TRAV17A0A0B4J275 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.45□□□□□ -2.48
TRAV17A0A0B4J275 MIR4251-201ENST00000635819 61 ntBASIC-0.45□□□□□ -2.48
TRAV17A0A0B4J275 MIR499B-201ENST00000636498 73 ntBASIC-0.45□□□□□ -2.48
TRAV17A0A0B4J275 MIR377-201ENST00000362145 69 ntBASIC-0.46□□□□□ -2.48
TRAV17A0A0B4J275 MIR101-1-201ENST00000362265 75 ntBASIC-0.46□□□□□ -2.48
TRAV17A0A0B4J275 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.46□□□□□ -2.48
TRAV17A0A0B4J275 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.46□□□□□ -2.48
TRAV17A0A0B4J275 Y_RNA.302-201ENST00000364997 102 ntBASIC-0.46□□□□□ -2.48
TRAV17A0A0B4J275 SNORD114-12-201ENST00000365400 75 ntBASIC-0.46□□□□□ -2.48
TRAV17A0A0B4J275 AC117470.1-201ENST00000381974 330 ntBASIC-0.46□□□□□ -2.48
TRAV17A0A0B4J275 MIR604-201ENST00000384880 94 ntBASIC-0.46□□□□□ -2.48
TRAV17A0A0B4J275 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms