Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 U6atac.1-201ENST00000616025 117 ntBASIC1.21□□□□□ -2.22
KLHDC3Q9BQ90 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
KLHDC3Q9BQ90 MIR8063-201ENST00000621930 81 ntBASIC1.21□□□□□ -2.22
KLHDC3Q9BQ90 AC098679.4-201ENST00000624241 654 ntBASIC1.21□□□□□ -2.22
KLHDC3Q9BQ90 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 RNU6-222P-201ENST00000362438 107 ntBASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 Y_RNA.48-201ENST00000362710 103 ntBASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 SNORD33-201ENST00000362761 85 ntBASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 Y_RNA.106-201ENST00000363189 100 ntBASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 Y_RNA.184-201ENST00000363884 108 ntBASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 RNU6-281P-201ENST00000384212 103 ntBASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 RNU6-601P-201ENST00000384540 107 ntBASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 MIR194-1-201ENST00000384892 85 ntBASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 RNU6-700P-201ENST00000391043 107 ntBASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 MTND4P18-201ENST00000447010 465 ntBASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 AL163195.1-201ENST00000496941 348 ntBASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 AC018710.1-201ENST00000506509 158 ntBASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 AC046134.1-201ENST00000514454 666 ntBASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 Y_RNA.708-201ENST00000516950 96 ntBASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 RNU1-92P-201ENST00000517017 135 ntBASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 AC105029.1-201ENST00000520250 669 ntBASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 AC093023.1-201ENST00000547375 507 ntBASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 AL137100.2-201ENST00000555786 315 ntBASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 AC005014.2-201ENST00000607795 599 ntBASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 AC084782.3-201ENST00000612282 578 ntBASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 AC095038.3-201ENST00000634439 195 ntBASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 MTND5P35-201ENST00000557537 1720 ntBASIC1.2□□□□□ -2.22
KLHDC3Q9BQ90 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 Y_RNA.2-201ENST00000362330 96 ntBASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 SNORD1A-201ENST00000364968 72 ntBASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 SNORA4.2-201ENST00000365313 147 ntBASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 Y_RNA.339-201ENST00000365325 102 ntBASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 RNU6-203P-201ENST00000384038 104 ntBASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 Y_RNA.482-201ENST00000384377 111 ntBASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 MIR190B-201ENST00000401119 79 ntBASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 RNU6-1050P-201ENST00000410388 107 ntBASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 RPL37P10-201ENST00000412884 288 ntBASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 MTCYBP10-201ENST00000424905 650 ntBASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 TOMM22P2-201ENST00000430735 237 ntBASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 RNU7-34P-201ENST00000459394 64 ntBASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 AC099513.1-201ENST00000490423 301 ntBASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 AC103851.1-201ENST00000506833 274 ntBASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 Y_RNA.670-201ENST00000516255 105 ntBASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 CYCSP23-201ENST00000519781 313 ntBASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 APOOP3-201ENST00000536787 586 ntBASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 AC090617.3-201ENST00000573670 475 ntBASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 AC015688.6-201ENST00000577737 104 ntBASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 AL512598.1-201ENST00000610158 273 ntBASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 MIR7974-201ENST00000615835 79 ntBASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 U6.108-201ENST00000637764 58 ntBASIC1.19□□□□□ -2.22
KLHDC3Q9BQ90 MTND5P16-201ENST00000460269 1703 ntBASIC1.18□□□□□ -2.22
KLHDC3Q9BQ90 MIR378A-201ENST00000362177 66 ntBASIC1.18□□□□□ -2.22
KLHDC3Q9BQ90 Y_RNA.364-201ENST00000365532 101 ntBASIC1.18□□□□□ -2.22
KLHDC3Q9BQ90 RNU6-331P-201ENST00000384724 107 ntBASIC1.18□□□□□ -2.22
KLHDC3Q9BQ90 RNA5SP109-201ENST00000391010 116 ntBASIC1.18□□□□□ -2.22
KLHDC3Q9BQ90 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
KLHDC3Q9BQ90 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.18□□□□□ -2.22
KLHDC3Q9BQ90 RPS27P1-201ENST00000450552 247 ntBASIC1.18□□□□□ -2.22
KLHDC3Q9BQ90 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.18□□□□□ -2.22
KLHDC3Q9BQ90 AC079140.2-201ENST00000506193 142 ntBASIC1.18□□□□□ -2.22
KLHDC3Q9BQ90 RNU6-902P-201ENST00000517212 91 ntBASIC1.18□□□□□ -2.22
KLHDC3Q9BQ90 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.18□□□□□ -2.22
KLHDC3Q9BQ90 AC005668.1-201ENST00000571142 476 ntBASIC1.18□□□□□ -2.22
KLHDC3Q9BQ90 AC005899.2-201ENST00000584353 90 ntBASIC1.18□□□□□ -2.22
KLHDC3Q9BQ90 MIR3660-201ENST00000584845 100 ntBASIC1.18□□□□□ -2.22
KLHDC3Q9BQ90 U6.73-201ENST00000619194 103 ntBASIC1.18□□□□□ -2.22
KLHDC3Q9BQ90 AC006435.5-201ENST00000624486 112 ntBASIC1.18□□□□□ -2.22
KLHDC3Q9BQ90 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
KLHDC3Q9BQ90 MIR26B-201ENST00000362251 77 ntBASIC1.17□□□□□ -2.22
KLHDC3Q9BQ90 Y_RNA.88-201ENST00000363029 99 ntBASIC1.17□□□□□ -2.22
KLHDC3Q9BQ90 RNY1P16-201ENST00000363063 111 ntBASIC1.17□□□□□ -2.22
KLHDC3Q9BQ90 SNORA7.1-201ENST00000363750 139 ntBASIC1.17□□□□□ -2.22
KLHDC3Q9BQ90 RNU6-767P-201ENST00000384132 107 ntBASIC1.17□□□□□ -2.22
KLHDC3Q9BQ90 Y_RNA.473-201ENST00000384333 102 ntBASIC1.17□□□□□ -2.22
KLHDC3Q9BQ90 Y_RNA.505-201ENST00000384489 102 ntBASIC1.17□□□□□ -2.22
KLHDC3Q9BQ90 MIR758-201ENST00000390227 88 ntBASIC1.17□□□□□ -2.22
KLHDC3Q9BQ90 RPL21P1-201ENST00000399532 476 ntBASIC1.17□□□□□ -2.22
KLHDC3Q9BQ90 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.17□□□□□ -2.22
KLHDC3Q9BQ90 EIF1P2-201ENST00000428233 350 ntBASIC1.17□□□□□ -2.22
KLHDC3Q9BQ90 AC027119.1-201ENST00000440877 241 ntBASIC1.17□□□□□ -2.22
KLHDC3Q9BQ90 AC116353.2-201ENST00000505332 712 ntBASIC1.17□□□□□ -2.22
KLHDC3Q9BQ90 RNU6-307P-201ENST00000516743 106 ntBASIC1.17□□□□□ -2.22
KLHDC3Q9BQ90 MTND4LP26-201ENST00000518144 282 ntBASIC1.17□□□□□ -2.22
KLHDC3Q9BQ90 AC091144.1-201ENST00000519573 138 ntBASIC1.17□□□□□ -2.22
KLHDC3Q9BQ90 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.17□□□□□ -2.22
KLHDC3Q9BQ90 AC090821.2-201ENST00000523552 176 ntBASIC1.17□□□□□ -2.22
KLHDC3Q9BQ90 FRG2DP-202ENST00000566967 323 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms