Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 RPL30P10-201ENST00000488148 337 ntBASIC1.03□□□□□ -2.24
RFX3P48380 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.03□□□□□ -2.24
RFX3P48380 RN7SKP88-201ENST00000516847 250 ntBASIC1.03□□□□□ -2.24
RFX3P48380 SUMO2P16-201ENST00000519475 264 ntBASIC1.03□□□□□ -2.24
RFX3P48380 AC080013.6-201ENST00000606185 215 ntBASIC1.03□□□□□ -2.24
RFX3P48380 7SK.8-201ENST00000612110 250 ntBASIC1.03□□□□□ -2.24
RFX3P48380 7SK.11-201ENST00000615477 250 ntBASIC1.03□□□□□ -2.24
RFX3P48380 AC009248.2-201ENST00000619826 254 ntBASIC1.03□□□□□ -2.24
RFX3P48380 7SK.13-201ENST00000622040 250 ntBASIC1.03□□□□□ -2.24
RFX3P48380 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.03□□□□□ -2.24
RFX3P48380 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.03□□□□□ -2.24
RFX3P48380 U6.108-201ENST00000637764 58 ntBASIC1.03□□□□□ -2.24
RFX3P48380 Y_RNA.157-201ENST00000363638 102 ntBASIC1.02□□□□□ -2.25
RFX3P48380 Y_RNA.191-201ENST00000363972 113 ntBASIC1.02□□□□□ -2.25
RFX3P48380 RNU6-1090P-201ENST00000364065 94 ntBASIC1.02□□□□□ -2.25
RFX3P48380 AC010154.1-201ENST00000425857 269 ntBASIC1.02□□□□□ -2.25
RFX3P48380 USMG5P1-201ENST00000425964 177 ntBASIC1.02□□□□□ -2.25
RFX3P48380 PGBD4P5-201ENST00000445958 426 ntBASIC1.02□□□□□ -2.25
RFX3P48380 RNU7-94P-201ENST00000459576 63 ntBASIC1.02□□□□□ -2.25
RFX3P48380 AC105313.1-201ENST00000509121 353 ntBASIC1.02□□□□□ -2.25
RFX3P48380 AC093303.1-201ENST00000514549 295 ntBASIC1.02□□□□□ -2.25
RFX3P48380 RNU6-864P-201ENST00000516256 108 ntBASIC1.02□□□□□ -2.25
RFX3P48380 RNU7-40P-201ENST00000516397 64 ntBASIC1.02□□□□□ -2.25
RFX3P48380 SNORA31.10-201ENST00000516482 106 ntBASIC1.02□□□□□ -2.25
RFX3P48380 RNA5SP102-201ENST00000516865 106 ntBASIC1.02□□□□□ -2.25
RFX3P48380 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.02□□□□□ -2.25
RFX3P48380 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.02□□□□□ -2.25
RFX3P48380 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.02□□□□□ -2.25
RFX3P48380 MIR4273-201ENST00000582824 84 ntBASIC1.02□□□□□ -2.25
RFX3P48380 MIR4295-201ENST00000585286 85 ntBASIC1.02□□□□□ -2.25
RFX3P48380 AC080078.3-201ENST00000605407 463 ntBASIC1.02□□□□□ -2.25
RFX3P48380 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.02□□□□□ -2.25
RFX3P48380 AC021506.2-201ENST00000612354 169 ntBASIC1.02□□□□□ -2.25
RFX3P48380 U4.5-201ENST00000617137 123 ntBASIC1.02□□□□□ -2.25
RFX3P48380 AC006435.5-201ENST00000624486 112 ntBASIC1.02□□□□□ -2.25
RFX3P48380 AC099654.5-201ENST00000636479 350 ntBASIC1.02□□□□□ -2.25
RFX3P48380 AC068647.2-201ENST00000637380 353 ntBASIC1.02□□□□□ -2.25
RFX3P48380 Y_RNA.179-201ENST00000363844 90 ntBASIC1.01□□□□□ -2.25
RFX3P48380 Y_RNA.269-201ENST00000364685 89 ntBASIC1.01□□□□□ -2.25
RFX3P48380 RNU6-1031P-201ENST00000384773 107 ntBASIC1.01□□□□□ -2.25
RFX3P48380 MRPL35P3-201ENST00000421557 364 ntBASIC1.01□□□□□ -2.25
RFX3P48380 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.01□□□□□ -2.25
RFX3P48380 AC087343.1-201ENST00000477341 475 ntBASIC1.01□□□□□ -2.25
RFX3P48380 AC103851.1-201ENST00000506833 274 ntBASIC1.01□□□□□ -2.25
RFX3P48380 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.01□□□□□ -2.25
RFX3P48380 RNU7-99P-201ENST00000516271 62 ntBASIC1.01□□□□□ -2.25
RFX3P48380 RNA5SP454-201ENST00000517231 127 ntBASIC1.01□□□□□ -2.25
RFX3P48380 AL590705.4-201ENST00000532209 134 ntBASIC1.01□□□□□ -2.25
RFX3P48380 EIF1P4-201ENST00000572664 335 ntBASIC1.01□□□□□ -2.25
RFX3P48380 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.01□□□□□ -2.25
RFX3P48380 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.01□□□□□ -2.25
RFX3P48380 U6.73-201ENST00000619194 103 ntBASIC1.01□□□□□ -2.25
RFX3P48380 ZNF299P-201ENST00000406845 1804 ntBASIC1.01□□□□□ -2.25
RFX3P48380 RNU4-75P-201ENST00000364621 146 ntBASIC1□□□□□ -2.25
RFX3P48380 SNORD87-201ENST00000364849 89 ntBASIC1□□□□□ -2.25
RFX3P48380 Y_RNA.508-201ENST00000384502 114 ntBASIC1□□□□□ -2.25
RFX3P48380 RNU11-5P-201ENST00000391216 129 ntBASIC1□□□□□ -2.25
RFX3P48380 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1□□□□□ -2.25
RFX3P48380 MTND4LP16-201ENST00000440828 295 ntBASIC1□□□□□ -2.25
RFX3P48380 DYNLT3P2-201ENST00000442517 295 ntBASIC1□□□□□ -2.25
RFX3P48380 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1□□□□□ -2.25
RFX3P48380 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1□□□□□ -2.25
RFX3P48380 AC091179.3-201ENST00000474761 144 ntBASIC1□□□□□ -2.25
RFX3P48380 RNU6-1314P-201ENST00000517139 104 ntBASIC1□□□□□ -2.25
RFX3P48380 RNU6-165P-201ENST00000517170 99 ntBASIC1□□□□□ -2.25
RFX3P48380 APOOP3-201ENST00000536787 586 ntBASIC1□□□□□ -2.25
RFX3P48380 MIR3942-201ENST00000585264 109 ntBASIC1□□□□□ -2.25
RFX3P48380 AL162424.1-201ENST00000602325 221 ntBASIC1□□□□□ -2.25
RFX3P48380 AC022217.4-201ENST00000604389 163 ntBASIC1□□□□□ -2.25
RFX3P48380 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1□□□□□ -2.25
RFX3P48380 AC027335.2-201ENST00000624030 375 ntBASIC1□□□□□ -2.25
RFX3P48380 AC090617.10-201ENST00000624308 134 ntBASIC1□□□□□ -2.25
RFX3P48380 RNU6-595P-201ENST00000363944 107 ntBASIC0.99□□□□□ -2.25
RFX3P48380 Y_RNA.224-201ENST00000364308 111 ntBASIC0.99□□□□□ -2.25
RFX3P48380 RNU6-53P-201ENST00000365367 106 ntBASIC0.99□□□□□ -2.25
RFX3P48380 Y_RNA.415-201ENST00000384012 112 ntBASIC0.99□□□□□ -2.25
RFX3P48380 Y_RNA.436-201ENST00000384097 102 ntBASIC0.99□□□□□ -2.25
RFX3P48380 Y_RNA.450-201ENST00000384198 113 ntBASIC0.99□□□□□ -2.25
RFX3P48380 MRPL42P3-201ENST00000401492 326 ntBASIC0.99□□□□□ -2.25
RFX3P48380 RPL30P16-201ENST00000419341 429 ntBASIC0.99□□□□□ -2.25
RFX3P48380 DLGAP5P1-201ENST00000430307 464 ntBASIC0.99□□□□□ -2.25
RFX3P48380 COX6CP14-201ENST00000469580 174 ntBASIC0.99□□□□□ -2.25
RFX3P48380 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.99□□□□□ -2.25
RFX3P48380 RNU1-54P-201ENST00000517181 120 ntBASIC0.99□□□□□ -2.25
RFX3P48380 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.99□□□□□ -2.25
RFX3P48380 AK6P2-201ENST00000549020 471 ntBASIC0.99□□□□□ -2.25
RFX3P48380 MIR4452-201ENST00000583004 71 ntBASIC0.99□□□□□ -2.25
RFX3P48380 BX284668.6-201ENST00000606899 438 ntBASIC0.99□□□□□ -2.25
RFX3P48380 AC010999.1-201ENST00000611856 324 ntBASIC0.99□□□□□ -2.25
RFX3P48380 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.99□□□□□ -2.25
RFX3P48380 MIR8054-201ENST00000620877 86 ntBASIC0.99□□□□□ -2.25
RFX3P48380 AC027514.1-201ENST00000588561 1603 ntBASIC0.99□□□□□ -2.25
RFX3P48380 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
RFX3P48380 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
RFX3P48380 Y_RNA.89-201ENST00000363031 102 ntBASIC0.98□□□□□ -2.25
RFX3P48380 RNU1-22P-201ENST00000363334 158 ntBASIC0.98□□□□□ -2.25
RFX3P48380 Y_RNA.184-201ENST00000363884 108 ntBASIC0.98□□□□□ -2.25
RFX3P48380 SNORA70.7-201ENST00000384159 133 ntBASIC0.98□□□□□ -2.25
RFX3P48380 SNORA25-201ENST00000384384 134 ntBASIC0.98□□□□□ -2.25
RFX3P48380 MIR10B-201ENST00000385011 110 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms