Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RNU7-175P-201ENST00000515915 61 ntBASIC0.98□□□□□ -2.25
CD74P04233 RNU6-107P-201ENST00000516643 102 ntBASIC0.98□□□□□ -2.25
CD74P04233 AC027419.1-201ENST00000522976 328 ntBASIC0.98□□□□□ -2.25
CD74P04233 AK6P2-201ENST00000549020 471 ntBASIC0.98□□□□□ -2.25
CD74P04233 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.98□□□□□ -2.25
CD74P04233 MIR5696-201ENST00000578474 85 ntBASIC0.98□□□□□ -2.25
CD74P04233 MIR3937-201ENST00000580135 106 ntBASIC0.98□□□□□ -2.25
CD74P04233 MZT1P2-201ENST00000604387 248 ntBASIC0.98□□□□□ -2.25
CD74P04233 U4.5-201ENST00000617137 123 ntBASIC0.98□□□□□ -2.25
CD74P04233 AL353770.2-201ENST00000620024 78 ntBASIC0.98□□□□□ -2.25
CD74P04233 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.98□□□□□ -2.25
CD74P04233 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
CD74P04233 MTND5P35-201ENST00000557537 1720 ntBASIC0.98□□□□□ -2.25
CD74P04233 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
CD74P04233 Y_RNA.179-201ENST00000363844 90 ntBASIC0.97□□□□□ -2.25
CD74P04233 SNORA25.9-201ENST00000365087 128 ntBASIC0.97□□□□□ -2.25
CD74P04233 MIR499A-201ENST00000384903 122 ntBASIC0.97□□□□□ -2.25
CD74P04233 RNU6-159P-201ENST00000391080 106 ntBASIC0.97□□□□□ -2.25
CD74P04233 RPL21P1-201ENST00000399532 476 ntBASIC0.97□□□□□ -2.25
CD74P04233 AL161935.2-201ENST00000414627 60 ntBASIC0.97□□□□□ -2.25
CD74P04233 AC008134.1-201ENST00000420943 193 ntBASIC0.97□□□□□ -2.25
CD74P04233 AL606517.2-201ENST00000442855 241 ntBASIC0.97□□□□□ -2.25
CD74P04233 RPS26P45-201ENST00000471748 340 ntBASIC0.97□□□□□ -2.25
CD74P04233 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.97□□□□□ -2.25
CD74P04233 Y_RNA.682-201ENST00000516457 100 ntBASIC0.97□□□□□ -2.25
CD74P04233 RNU1-142P-201ENST00000516682 145 ntBASIC0.97□□□□□ -2.25
CD74P04233 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.97□□□□□ -2.25
CD74P04233 AL590705.4-201ENST00000532209 134 ntBASIC0.97□□□□□ -2.25
CD74P04233 AL929325.1-201ENST00000603096 117 ntBASIC0.97□□□□□ -2.25
CD74P04233 HSPE1P19-201ENST00000603327 295 ntBASIC0.97□□□□□ -2.25
CD74P04233 AC073413.2-201ENST00000604332 360 ntBASIC0.97□□□□□ -2.25
CD74P04233 AC090517.2-201ENST00000614966 680 ntBASIC0.97□□□□□ -2.25
CD74P04233 AL157834.3-201ENST00000615543 103 ntBASIC0.97□□□□□ -2.25
CD74P04233 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CD74P04233 RNU6-222P-201ENST00000362438 107 ntBASIC0.96□□□□□ -2.26
CD74P04233 Y_RNA.86-201ENST00000363020 111 ntBASIC0.96□□□□□ -2.26
CD74P04233 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.96□□□□□ -2.26
CD74P04233 RNU6-793P-201ENST00000384233 104 ntBASIC0.96□□□□□ -2.26
CD74P04233 RNU6-842P-201ENST00000384269 107 ntBASIC0.96□□□□□ -2.26
CD74P04233 MIR515-2-201ENST00000384883 83 ntBASIC0.96□□□□□ -2.26
CD74P04233 MIR515-1-201ENST00000384884 83 ntBASIC0.96□□□□□ -2.26
CD74P04233 MIR10B-201ENST00000385011 110 ntBASIC0.96□□□□□ -2.26
CD74P04233 MIR1185-2-201ENST00000408687 86 ntBASIC0.96□□□□□ -2.26
CD74P04233 RNA5SP118-201ENST00000410385 109 ntBASIC0.96□□□□□ -2.26
CD74P04233 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.96□□□□□ -2.26
CD74P04233 RPS29P25-201ENST00000481709 171 ntBASIC0.96□□□□□ -2.26
CD74P04233 AC134698.4-201ENST00000523451 826 ntBASIC0.96□□□□□ -2.26
CD74P04233 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.96□□□□□ -2.26
CD74P04233 CBX3P8-201ENST00000532412 525 ntBASIC0.96□□□□□ -2.26
CD74P04233 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.96□□□□□ -2.26
CD74P04233 FRG2DP-202ENST00000566967 323 ntBASIC0.96□□□□□ -2.26
CD74P04233 AL359075.3-201ENST00000613288 217 ntBASIC0.96□□□□□ -2.26
CD74P04233 AL133216.2-202ENST00000634512 349 ntBASIC0.96□□□□□ -2.26
CD74P04233 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.96□□□□□ -2.26
CD74P04233 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CD74P04233 ZNF299P-201ENST00000406845 1804 ntBASIC0.96□□□□□ -2.26
CD74P04233 RNU6-1266P-201ENST00000362794 105 ntBASIC0.95□□□□□ -2.26
CD74P04233 U3.8-201ENST00000363675 217 ntBASIC0.95□□□□□ -2.26
CD74P04233 RNU6-280P-201ENST00000364145 104 ntBASIC0.95□□□□□ -2.26
CD74P04233 Y_RNA.301-201ENST00000364990 103 ntBASIC0.95□□□□□ -2.26
CD74P04233 RNA5SP259-201ENST00000365541 109 ntBASIC0.95□□□□□ -2.26
CD74P04233 AL139396.1-201ENST00000421137 167 ntBASIC0.95□□□□□ -2.26
CD74P04233 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.95□□□□□ -2.26
CD74P04233 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.95□□□□□ -2.26
CD74P04233 MTND3P23-201ENST00000431980 347 ntBASIC0.95□□□□□ -2.26
CD74P04233 PGBD4P5-201ENST00000445958 426 ntBASIC0.95□□□□□ -2.26
CD74P04233 MTND1P17-201ENST00000448961 204 ntBASIC0.95□□□□□ -2.26
CD74P04233 Y_RNA.655-201ENST00000515919 96 ntBASIC0.95□□□□□ -2.26
CD74P04233 RNU7-40P-201ENST00000516397 64 ntBASIC0.95□□□□□ -2.26
CD74P04233 Y_RNA.706-201ENST00000516933 99 ntBASIC0.95□□□□□ -2.26
CD74P04233 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.95□□□□□ -2.26
CD74P04233 AC015688.6-201ENST00000577737 104 ntBASIC0.95□□□□□ -2.26
CD74P04233 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.95□□□□□ -2.26
CD74P04233 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.95□□□□□ -2.26
CD74P04233 MIR4742-201ENST00000581069 85 ntBASIC0.95□□□□□ -2.26
CD74P04233 AC103810.9-201ENST00000606688 112 ntBASIC0.95□□□□□ -2.26
CD74P04233 AL365434.2-201ENST00000607979 234 ntBASIC0.95□□□□□ -2.26
CD74P04233 AC010999.1-201ENST00000611856 324 ntBASIC0.95□□□□□ -2.26
CD74P04233 AC012676.2-201ENST00000619258 186 ntBASIC0.95□□□□□ -2.26
CD74P04233 MIR8065-201ENST00000620577 100 ntBASIC0.95□□□□□ -2.26
CD74P04233 U6.108-201ENST00000637764 58 ntBASIC0.95□□□□□ -2.26
CD74P04233 AC073869.6-201ENST00000640656 341 ntBASIC0.95□□□□□ -2.26
CD74P04233 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
CD74P04233 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CD74P04233 Y_RNA.2-201ENST00000362330 96 ntBASIC0.94□□□□□ -2.26
CD74P04233 RNU6-595P-201ENST00000363944 107 ntBASIC0.94□□□□□ -2.26
CD74P04233 SNORA22-201ENST00000383907 134 ntBASIC0.94□□□□□ -2.26
CD74P04233 SNORA22C-201ENST00000384614 134 ntBASIC0.94□□□□□ -2.26
CD74P04233 MIR194-1-201ENST00000384892 85 ntBASIC0.94□□□□□ -2.26
CD74P04233 MIR513A1-201ENST00000385138 129 ntBASIC0.94□□□□□ -2.26
CD74P04233 AL356776.1-201ENST00000406574 447 ntBASIC0.94□□□□□ -2.26
CD74P04233 USMG5P1-201ENST00000425964 177 ntBASIC0.94□□□□□ -2.26
CD74P04233 RNU7-87P-201ENST00000459343 62 ntBASIC0.94□□□□□ -2.26
CD74P04233 AL133373.1-201ENST00000497098 94 ntBASIC0.94□□□□□ -2.26
CD74P04233 SUMO2P16-201ENST00000519475 264 ntBASIC0.94□□□□□ -2.26
CD74P04233 AC091144.1-201ENST00000519573 138 ntBASIC0.94□□□□□ -2.26
CD74P04233 AC024995.1-201ENST00000523014 93 ntBASIC0.94□□□□□ -2.26
CD74P04233 AL442163.3-201ENST00000554110 156 ntBASIC0.94□□□□□ -2.26
CD74P04233 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.94□□□□□ -2.26
CD74P04233 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 384.8 ms