Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 MIR1-2-201ENST00000384961 85 ntBASIC0.01□□□□□ -2.41
VPS29Q9UBQ0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
VPS29Q9UBQ0 NDUFA5P4-201ENST00000436704 385 ntBASIC0.01□□□□□ -2.41
VPS29Q9UBQ0 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.01□□□□□ -2.41
VPS29Q9UBQ0 GMFBP1-201ENST00000467831 427 ntBASIC0.01□□□□□ -2.41
VPS29Q9UBQ0 AC092989.1-201ENST00000481235 277 ntBASIC0.01□□□□□ -2.41
VPS29Q9UBQ0 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
VPS29Q9UBQ0 MRPS36P4-201ENST00000534436 298 ntBASIC0.01□□□□□ -2.41
VPS29Q9UBQ0 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
VPS29Q9UBQ0 HIF1AP1-201ENST00000553642 175 ntBASIC0.01□□□□□ -2.41
VPS29Q9UBQ0 MTND4P33-201ENST00000556706 766 ntBASIC0.01□□□□□ -2.41
VPS29Q9UBQ0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.01□□□□□ -2.41
VPS29Q9UBQ0 MIR4300-201ENST00000581016 96 ntBASIC0.01□□□□□ -2.41
VPS29Q9UBQ0 AC010487.4-201ENST00000637027 61 ntBASIC0.01□□□□□ -2.41
VPS29Q9UBQ0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
VPS29Q9UBQ0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0□□□□□ -2.41
VPS29Q9UBQ0 Y_RNA.123-201ENST00000363338 102 ntBASIC0□□□□□ -2.41
VPS29Q9UBQ0 RNA5SP62-201ENST00000363457 110 ntBASIC0□□□□□ -2.41
VPS29Q9UBQ0 RNU6-137P-201ENST00000363680 108 ntBASIC0□□□□□ -2.41
VPS29Q9UBQ0 RNU4-45P-201ENST00000365469 141 ntBASIC0□□□□□ -2.41
VPS29Q9UBQ0 RNA5SP482-201ENST00000391269 118 ntBASIC0□□□□□ -2.41
VPS29Q9UBQ0 Y_RNA.598-201ENST00000410480 95 ntBASIC0□□□□□ -2.41
VPS29Q9UBQ0 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0□□□□□ -2.41
VPS29Q9UBQ0 NDUFB4P10-201ENST00000452541 359 ntBASIC0□□□□□ -2.41
VPS29Q9UBQ0 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0□□□□□ -2.41
VPS29Q9UBQ0 AC005178.1-201ENST00000508392 440 ntBASIC0□□□□□ -2.41
VPS29Q9UBQ0 MTND1P5-201ENST00000517906 940 ntBASIC0□□□□□ -2.41
VPS29Q9UBQ0 LARP7P1-201ENST00000605576 316 ntBASIC0□□□□□ -2.41
VPS29Q9UBQ0 AC007671.2-201ENST00000637344 619 ntBASIC0□□□□□ -2.41
VPS29Q9UBQ0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.01□□□□□ -2.41
VPS29Q9UBQ0 RNU6-500P-201ENST00000362349 107 ntBASIC-0.01□□□□□ -2.41
VPS29Q9UBQ0 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.01□□□□□ -2.41
VPS29Q9UBQ0 RNY4P34-201ENST00000364779 95 ntBASIC-0.01□□□□□ -2.41
VPS29Q9UBQ0 MIR562-201ENST00000384894 95 ntBASIC-0.01□□□□□ -2.41
VPS29Q9UBQ0 SNRPGP12-201ENST00000449481 213 ntBASIC-0.01□□□□□ -2.41
VPS29Q9UBQ0 RNU7-138P-201ENST00000459479 64 ntBASIC-0.01□□□□□ -2.41
VPS29Q9UBQ0 RN7SKP164-201ENST00000516138 266 ntBASIC-0.01□□□□□ -2.41
VPS29Q9UBQ0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.01□□□□□ -2.41
VPS29Q9UBQ0 AP001372.4-201ENST00000524889 472 ntBASIC-0.01□□□□□ -2.41
VPS29Q9UBQ0 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.01□□□□□ -2.41
VPS29Q9UBQ0 AC023157.2-201ENST00000540596 141 ntBASIC-0.01□□□□□ -2.41
VPS29Q9UBQ0 AC027288.2-201ENST00000553028 243 ntBASIC-0.01□□□□□ -2.41
VPS29Q9UBQ0 MIR4514-201ENST00000581410 57 ntBASIC-0.01□□□□□ -2.41
VPS29Q9UBQ0 FGF7P1-201ENST00000582820 288 ntBASIC-0.01□□□□□ -2.41
VPS29Q9UBQ0 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC-0.01□□□□□ -2.41
VPS29Q9UBQ0 AL158050.2-201ENST00000605336 568 ntBASIC-0.01□□□□□ -2.41
VPS29Q9UBQ0 AC006566.1-201ENST00000608943 513 ntBASIC-0.01□□□□□ -2.41
VPS29Q9UBQ0 U2.17-201ENST00000611454 95 ntBASIC-0.01□□□□□ -2.41
VPS29Q9UBQ0 MIR6718-201ENST00000616153 80 ntBASIC-0.01□□□□□ -2.41
VPS29Q9UBQ0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.02□□□□□ -2.41
VPS29Q9UBQ0 SNORA1B-201ENST00000362535 133 ntBASIC-0.02□□□□□ -2.41
VPS29Q9UBQ0 SNORD44.1-201ENST00000363202 61 ntBASIC-0.02□□□□□ -2.41
VPS29Q9UBQ0 SNORD87-201ENST00000364849 89 ntBASIC-0.02□□□□□ -2.41
VPS29Q9UBQ0 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.02□□□□□ -2.41
VPS29Q9UBQ0 MIR573-201ENST00000384964 99 ntBASIC-0.02□□□□□ -2.41
VPS29Q9UBQ0 MIR487A-201ENST00000385009 80 ntBASIC-0.02□□□□□ -2.41
VPS29Q9UBQ0 MIR891A-201ENST00000401237 79 ntBASIC-0.02□□□□□ -2.41
VPS29Q9UBQ0 AC098592.1-201ENST00000419352 333 ntBASIC-0.02□□□□□ -2.41
VPS29Q9UBQ0 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.02□□□□□ -2.41
VPS29Q9UBQ0 U8.21-201ENST00000459536 136 ntBASIC-0.02□□□□□ -2.41
VPS29Q9UBQ0 HMGN2P26-201ENST00000463169 339 ntBASIC-0.02□□□□□ -2.41
VPS29Q9UBQ0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.02□□□□□ -2.41
VPS29Q9UBQ0 AC091133.4-201ENST00000511142 308 ntBASIC-0.02□□□□□ -2.41
VPS29Q9UBQ0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.02□□□□□ -2.41
VPS29Q9UBQ0 AP002004.2-201ENST00000531656 154 ntBASIC-0.02□□□□□ -2.41
VPS29Q9UBQ0 AC107308.1-201ENST00000615897 301 ntBASIC-0.02□□□□□ -2.41
VPS29Q9UBQ0 MIR7844-201ENST00000616161 122 ntBASIC-0.02□□□□□ -2.41
VPS29Q9UBQ0 uc_338.34-201ENST00000617467 174 ntBASIC-0.02□□□□□ -2.41
VPS29Q9UBQ0 AC092634.7-201ENST00000621022 103 ntBASIC-0.02□□□□□ -2.41
VPS29Q9UBQ0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
VPS29Q9UBQ0 RNU4-67P-201ENST00000364569 141 ntBASIC-0.03□□□□□ -2.41
VPS29Q9UBQ0 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.03□□□□□ -2.41
VPS29Q9UBQ0 RNU6-245P-201ENST00000384020 107 ntBASIC-0.03□□□□□ -2.41
VPS29Q9UBQ0 MIR122-201ENST00000385044 85 ntBASIC-0.03□□□□□ -2.41
VPS29Q9UBQ0 CALM2P3-201ENST00000400429 449 ntBASIC-0.03□□□□□ -2.41
VPS29Q9UBQ0 AL008987.1-201ENST00000415528 237 ntBASIC-0.03□□□□□ -2.41
VPS29Q9UBQ0 MTATP6P14-201ENST00000455189 673 ntBASIC-0.03□□□□□ -2.41
VPS29Q9UBQ0 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.03□□□□□ -2.41
VPS29Q9UBQ0 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.03□□□□□ -2.41
VPS29Q9UBQ0 AC074133.1-201ENST00000515696 183 ntBASIC-0.03□□□□□ -2.41
VPS29Q9UBQ0 MIR3682-201ENST00000581338 84 ntBASIC-0.03□□□□□ -2.41
VPS29Q9UBQ0 AC023932.2-201ENST00000603176 175 ntBASIC-0.03□□□□□ -2.41
VPS29Q9UBQ0 Z84480.1-201ENST00000605131 311 ntBASIC-0.03□□□□□ -2.41
VPS29Q9UBQ0 AC007684.1-201ENST00000609671 477 ntBASIC-0.03□□□□□ -2.41
VPS29Q9UBQ0 AC015726.2-201ENST00000620112 122 ntBASIC-0.03□□□□□ -2.41
VPS29Q9UBQ0 AC006435.5-201ENST00000624486 112 ntBASIC-0.03□□□□□ -2.41
VPS29Q9UBQ0 AL008636.1-201ENST00000625038 1018 ntBASIC-0.03□□□□□ -2.41
VPS29Q9UBQ0 MIR1-1-201ENST00000362147 71 ntBASIC-0.04□□□□□ -2.42
VPS29Q9UBQ0 RNY1-201ENST00000364228 113 ntBASIC-0.04□□□□□ -2.42
VPS29Q9UBQ0 MIR450B-201ENST00000401182 78 ntBASIC-0.04□□□□□ -2.42
VPS29Q9UBQ0 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.04□□□□□ -2.42
VPS29Q9UBQ0 ZNF114P1-201ENST00000453500 292 ntBASIC-0.04□□□□□ -2.42
VPS29Q9UBQ0 MTCO3P10-201ENST00000455912 772 ntBASIC-0.04□□□□□ -2.42
VPS29Q9UBQ0 AC091021.1-201ENST00000468051 388 ntBASIC-0.04□□□□□ -2.42
VPS29Q9UBQ0 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.04□□□□□ -2.42
VPS29Q9UBQ0 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.04□□□□□ -2.42
VPS29Q9UBQ0 CYCTP-201ENST00000504253 315 ntBASIC-0.04□□□□□ -2.42
VPS29Q9UBQ0 AC097462.1-201ENST00000514125 324 ntBASIC-0.04□□□□□ -2.42
VPS29Q9UBQ0 RNU6-341P-201ENST00000516973 96 ntBASIC-0.04□□□□□ -2.42
VPS29Q9UBQ0 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms