Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AL365434.2-201ENST00000607979 234 ntBASIC1.07□□□□□ -2.24
TNFSF9P41273 AC090517.2-201ENST00000614966 680 ntBASIC1.07□□□□□ -2.24
TNFSF9P41273 AC022709.1-201ENST00000615967 87 ntBASIC1.07□□□□□ -2.24
TNFSF9P41273 AC005562.2-201ENST00000618264 111 ntBASIC1.07□□□□□ -2.24
TNFSF9P41273 MIR6788-201ENST00000618842 66 ntBASIC1.07□□□□□ -2.24
TNFSF9P41273 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.07□□□□□ -2.24
TNFSF9P41273 MIR338-201ENST00000636369 67 ntBASIC1.07□□□□□ -2.24
TNFSF9P41273 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.07□□□□□ -2.24
TNFSF9P41273 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.06□□□□□ -2.24
TNFSF9P41273 Y_RNA.135-201ENST00000363439 95 ntBASIC1.06□□□□□ -2.24
TNFSF9P41273 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
TNFSF9P41273 MIR548J-201ENST00000408833 112 ntBASIC1.06□□□□□ -2.24
TNFSF9P41273 RNA5SP494-201ENST00000410653 129 ntBASIC1.06□□□□□ -2.24
TNFSF9P41273 ZNF885P-201ENST00000420174 1098 ntBASIC1.06□□□□□ -2.24
TNFSF9P41273 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.06□□□□□ -2.24
TNFSF9P41273 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.06□□□□□ -2.24
TNFSF9P41273 TOMM22P2-201ENST00000430735 237 ntBASIC1.06□□□□□ -2.24
TNFSF9P41273 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.06□□□□□ -2.24
TNFSF9P41273 RNU7-34P-201ENST00000459394 64 ntBASIC1.06□□□□□ -2.24
TNFSF9P41273 AL133373.1-201ENST00000497098 94 ntBASIC1.06□□□□□ -2.24
TNFSF9P41273 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.06□□□□□ -2.24
TNFSF9P41273 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.06□□□□□ -2.24
TNFSF9P41273 RNU7-40P-201ENST00000516397 64 ntBASIC1.06□□□□□ -2.24
TNFSF9P41273 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.06□□□□□ -2.24
TNFSF9P41273 AC100830.2-201ENST00000581636 240 ntBASIC1.06□□□□□ -2.24
TNFSF9P41273 MIR151B-201ENST00000584249 96 ntBASIC1.06□□□□□ -2.24
TNFSF9P41273 AC084782.3-201ENST00000612282 578 ntBASIC1.06□□□□□ -2.24
TNFSF9P41273 MIR8065-201ENST00000620577 100 ntBASIC1.06□□□□□ -2.24
TNFSF9P41273 AC009033.1-201ENST00000624279 431 ntBASIC1.06□□□□□ -2.24
TNFSF9P41273 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
TNFSF9P41273 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.05□□□□□ -2.24
TNFSF9P41273 RNY4P14-201ENST00000363656 96 ntBASIC1.05□□□□□ -2.24
TNFSF9P41273 Y_RNA.295-201ENST00000364918 102 ntBASIC1.05□□□□□ -2.24
TNFSF9P41273 Y_RNA.402-201ENST00000383972 102 ntBASIC1.05□□□□□ -2.24
TNFSF9P41273 RNU6-968P-201ENST00000384076 107 ntBASIC1.05□□□□□ -2.24
TNFSF9P41273 SNORA67.2-201ENST00000384300 149 ntBASIC1.05□□□□□ -2.24
TNFSF9P41273 RNU6-784P-201ENST00000384330 106 ntBASIC1.05□□□□□ -2.24
TNFSF9P41273 RNU6-1215P-201ENST00000384441 102 ntBASIC1.05□□□□□ -2.24
TNFSF9P41273 MIR517A-201ENST00000385001 87 ntBASIC1.05□□□□□ -2.24
TNFSF9P41273 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.05□□□□□ -2.24
TNFSF9P41273 RPS29P28-201ENST00000446439 141 ntBASIC1.05□□□□□ -2.24
TNFSF9P41273 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.05□□□□□ -2.24
TNFSF9P41273 RPL30P10-201ENST00000488148 337 ntBASIC1.05□□□□□ -2.24
TNFSF9P41273 AC011352.1-201ENST00000512300 793 ntBASIC1.05□□□□□ -2.24
TNFSF9P41273 RNU6-948P-201ENST00000516374 107 ntBASIC1.05□□□□□ -2.24
TNFSF9P41273 RNU2-34P-201ENST00000516534 121 ntBASIC1.05□□□□□ -2.24
TNFSF9P41273 RNU6-1314P-201ENST00000517139 104 ntBASIC1.05□□□□□ -2.24
TNFSF9P41273 AL512310.8-201ENST00000550183 120 ntBASIC1.05□□□□□ -2.24
TNFSF9P41273 UBL5P4-201ENST00000562584 236 ntBASIC1.05□□□□□ -2.24
TNFSF9P41273 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.05□□□□□ -2.24
TNFSF9P41273 MIR8076-201ENST00000611401 83 ntBASIC1.05□□□□□ -2.24
TNFSF9P41273 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.05□□□□□ -2.24
TNFSF9P41273 AC040896.1-201ENST00000613819 479 ntBASIC1.05□□□□□ -2.24
TNFSF9P41273 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.05□□□□□ -2.24
TNFSF9P41273 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.05□□□□□ -2.24
TNFSF9P41273 MIR3688-2-201ENST00000636963 87 ntBASIC1.05□□□□□ -2.24
TNFSF9P41273 SNORD87-201ENST00000364849 89 ntBASIC1.04□□□□□ -2.24
TNFSF9P41273 RNA5SP259-201ENST00000365541 109 ntBASIC1.04□□□□□ -2.24
TNFSF9P41273 Y_RNA.414-201ENST00000384011 101 ntBASIC1.04□□□□□ -2.24
TNFSF9P41273 RNU6-214P-201ENST00000384130 107 ntBASIC1.04□□□□□ -2.24
TNFSF9P41273 RNU6-842P-201ENST00000384269 107 ntBASIC1.04□□□□□ -2.24
TNFSF9P41273 MIR194-1-201ENST00000384892 85 ntBASIC1.04□□□□□ -2.24
TNFSF9P41273 MIR618-201ENST00000385287 98 ntBASIC1.04□□□□□ -2.24
TNFSF9P41273 AC016909.1-201ENST00000415916 166 ntBASIC1.04□□□□□ -2.24
TNFSF9P41273 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.04□□□□□ -2.24
TNFSF9P41273 RPS4XP11-201ENST00000446897 772 ntBASIC1.04□□□□□ -2.24
TNFSF9P41273 MTCO1P29-201ENST00000496868 288 ntBASIC1.04□□□□□ -2.24
TNFSF9P41273 Y_RNA.655-201ENST00000515919 96 ntBASIC1.04□□□□□ -2.24
TNFSF9P41273 RNU6-1223P-201ENST00000517124 104 ntBASIC1.04□□□□□ -2.24
TNFSF9P41273 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.04□□□□□ -2.24
TNFSF9P41273 AC109635.3-201ENST00000529536 185 ntBASIC1.04□□□□□ -2.24
TNFSF9P41273 RAB11AP2-201ENST00000545905 639 ntBASIC1.04□□□□□ -2.24
TNFSF9P41273 FGF7P1-201ENST00000582820 288 ntBASIC1.04□□□□□ -2.24
TNFSF9P41273 AP000907.4-201ENST00000604143 237 ntBASIC1.04□□□□□ -2.24
TNFSF9P41273 AL353149.1-201ENST00000610667 244 ntBASIC1.04□□□□□ -2.24
TNFSF9P41273 MIR6515-201ENST00000619843 57 ntBASIC1.04□□□□□ -2.24
TNFSF9P41273 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.04□□□□□ -2.24
TNFSF9P41273 AC006001.4-201ENST00000622243 395 ntBASIC1.04□□□□□ -2.24
TNFSF9P41273 SCARNA4-201ENST00000629045 128 ntBASIC1.04□□□□□ -2.24
TNFSF9P41273 MIR3662-201ENST00000637030 95 ntBASIC1.04□□□□□ -2.24
TNFSF9P41273 ZNF204P-201ENST00000416749 2397 ntBASIC1.04□□□□□ -2.24
TNFSF9P41273 snoU2-30.2-201ENST00000362805 70 ntBASIC1.03□□□□□ -2.24
TNFSF9P41273 Y_RNA.301-201ENST00000364990 103 ntBASIC1.03□□□□□ -2.24
TNFSF9P41273 SNORA72.2-201ENST00000365028 127 ntBASIC1.03□□□□□ -2.24
TNFSF9P41273 SNORD116-11-201ENST00000383882 92 ntBASIC1.03□□□□□ -2.24
TNFSF9P41273 Y_RNA.466-201ENST00000384294 113 ntBASIC1.03□□□□□ -2.24
TNFSF9P41273 RNU6-790P-201ENST00000384479 105 ntBASIC1.03□□□□□ -2.24
TNFSF9P41273 Y_RNA.533-201ENST00000384596 114 ntBASIC1.03□□□□□ -2.24
TNFSF9P41273 RPL30P16-201ENST00000419341 429 ntBASIC1.03□□□□□ -2.24
TNFSF9P41273 USP9YP30-201ENST00000430729 455 ntBASIC1.03□□□□□ -2.24
TNFSF9P41273 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.03□□□□□ -2.24
TNFSF9P41273 HMGN2P34-201ENST00000437647 269 ntBASIC1.03□□□□□ -2.24
TNFSF9P41273 AL606517.2-201ENST00000442855 241 ntBASIC1.03□□□□□ -2.24
TNFSF9P41273 NFU1P2-201ENST00000448700 469 ntBASIC1.03□□□□□ -2.24
TNFSF9P41273 AC114982.1-201ENST00000469402 321 ntBASIC1.03□□□□□ -2.24
TNFSF9P41273 MTCO2P30-201ENST00000503662 364 ntBASIC1.03□□□□□ -2.24
TNFSF9P41273 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.03□□□□□ -2.24
TNFSF9P41273 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.03□□□□□ -2.24
TNFSF9P41273 RNU4-49P-201ENST00000516080 140 ntBASIC1.03□□□□□ -2.24
TNFSF9P41273 RN7SKP88-201ENST00000516847 250 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 152 ms