Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 DLGAP5P1-201ENST00000430307 464 ntBASIC1.38□□□□□ -2.19
VEGFDO43915 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.38□□□□□ -2.19
VEGFDO43915 AC005840.1-201ENST00000498412 377 ntBASIC1.38□□□□□ -2.19
VEGFDO43915 RNU1-54P-201ENST00000517181 120 ntBASIC1.38□□□□□ -2.19
VEGFDO43915 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.38□□□□□ -2.19
VEGFDO43915 AL590705.4-201ENST00000532209 134 ntBASIC1.38□□□□□ -2.19
VEGFDO43915 MIR4421-201ENST00000578133 69 ntBASIC1.38□□□□□ -2.19
VEGFDO43915 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.38□□□□□ -2.19
VEGFDO43915 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.38□□□□□ -2.19
VEGFDO43915 AC009248.2-201ENST00000619826 254 ntBASIC1.38□□□□□ -2.19
VEGFDO43915 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
VEGFDO43915 ZNF299P-201ENST00000406845 1804 ntBASIC1.38□□□□□ -2.19
VEGFDO43915 SNORA33-201ENST00000363664 130 ntBASIC1.37□□□□□ -2.19
VEGFDO43915 SNORA4.2-201ENST00000365313 147 ntBASIC1.37□□□□□ -2.19
VEGFDO43915 Y_RNA.450-201ENST00000384198 113 ntBASIC1.37□□□□□ -2.19
VEGFDO43915 RPL21P1-201ENST00000399532 476 ntBASIC1.37□□□□□ -2.19
VEGFDO43915 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.37□□□□□ -2.19
VEGFDO43915 AL135790.2-201ENST00000437701 267 ntBASIC1.37□□□□□ -2.19
VEGFDO43915 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.37□□□□□ -2.19
VEGFDO43915 PGBD4P5-201ENST00000445958 426 ntBASIC1.37□□□□□ -2.19
VEGFDO43915 RPL31P58-201ENST00000469001 379 ntBASIC1.37□□□□□ -2.19
VEGFDO43915 RPL30P10-201ENST00000488148 337 ntBASIC1.37□□□□□ -2.19
VEGFDO43915 AC103851.1-201ENST00000506833 274 ntBASIC1.37□□□□□ -2.19
VEGFDO43915 AC093303.1-201ENST00000514549 295 ntBASIC1.37□□□□□ -2.19
VEGFDO43915 RNU6-720P-201ENST00000516363 108 ntBASIC1.37□□□□□ -2.19
VEGFDO43915 RNU6-1314P-201ENST00000517139 104 ntBASIC1.37□□□□□ -2.19
VEGFDO43915 AC019176.1-201ENST00000518519 225 ntBASIC1.37□□□□□ -2.19
VEGFDO43915 APOOP3-201ENST00000536787 586 ntBASIC1.37□□□□□ -2.19
VEGFDO43915 AC006435.5-201ENST00000624486 112 ntBASIC1.37□□□□□ -2.19
VEGFDO43915 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.37□□□□□ -2.19
VEGFDO43915 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
VEGFDO43915 Y_RNA.89-201ENST00000363031 102 ntBASIC1.36□□□□□ -2.19
VEGFDO43915 SNORA7.1-201ENST00000363750 139 ntBASIC1.36□□□□□ -2.19
VEGFDO43915 AL139396.1-201ENST00000421137 167 ntBASIC1.36□□□□□ -2.19
VEGFDO43915 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.36□□□□□ -2.19
VEGFDO43915 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.36□□□□□ -2.19
VEGFDO43915 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.36□□□□□ -2.19
VEGFDO43915 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.36□□□□□ -2.19
VEGFDO43915 RNU7-99P-201ENST00000516271 62 ntBASIC1.36□□□□□ -2.19
VEGFDO43915 RNA5SP454-201ENST00000517231 127 ntBASIC1.36□□□□□ -2.19
VEGFDO43915 CYCSP23-201ENST00000519781 313 ntBASIC1.36□□□□□ -2.19
VEGFDO43915 AL442163.3-201ENST00000554110 156 ntBASIC1.36□□□□□ -2.19
VEGFDO43915 TPRKBP2-201ENST00000565969 475 ntBASIC1.36□□□□□ -2.19
VEGFDO43915 MIR3684-201ENST00000579779 74 ntBASIC1.36□□□□□ -2.19
VEGFDO43915 MIR4742-201ENST00000581069 85 ntBASIC1.36□□□□□ -2.19
VEGFDO43915 AL162424.1-201ENST00000602325 221 ntBASIC1.36□□□□□ -2.19
VEGFDO43915 AL355802.3-201ENST00000607571 545 ntBASIC1.36□□□□□ -2.19
VEGFDO43915 AC090617.10-201ENST00000624308 134 ntBASIC1.36□□□□□ -2.19
VEGFDO43915 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
VEGFDO43915 RNA5SP109-201ENST00000391010 116 ntBASIC1.35□□□□□ -2.19
VEGFDO43915 AC091179.3-201ENST00000474761 144 ntBASIC1.35□□□□□ -2.19
VEGFDO43915 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.35□□□□□ -2.19
VEGFDO43915 AC093913.1-201ENST00000614178 329 ntBASIC1.35□□□□□ -2.19
VEGFDO43915 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.35□□□□□ -2.19
VEGFDO43915 U6.73-201ENST00000619194 103 ntBASIC1.35□□□□□ -2.19
VEGFDO43915 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.35□□□□□ -2.19
VEGFDO43915 RNU6-595P-201ENST00000363944 107 ntBASIC1.34□□□□□ -2.19
VEGFDO43915 RNU6-1031P-201ENST00000384773 107 ntBASIC1.34□□□□□ -2.19
VEGFDO43915 MIR150-201ENST00000385048 84 ntBASIC1.34□□□□□ -2.19
VEGFDO43915 RNU6-955P-201ENST00000410497 104 ntBASIC1.34□□□□□ -2.19
VEGFDO43915 RPL30P16-201ENST00000419341 429 ntBASIC1.34□□□□□ -2.19
VEGFDO43915 TOMM22P2-201ENST00000430735 237 ntBASIC1.34□□□□□ -2.19
VEGFDO43915 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.34□□□□□ -2.19
VEGFDO43915 RPS27P1-201ENST00000450552 247 ntBASIC1.34□□□□□ -2.19
VEGFDO43915 FO393415.2-201ENST00000480085 343 ntBASIC1.34□□□□□ -2.19
VEGFDO43915 Y_RNA.706-201ENST00000516933 99 ntBASIC1.34□□□□□ -2.19
VEGFDO43915 MIR3942-201ENST00000585264 109 ntBASIC1.34□□□□□ -2.19
VEGFDO43915 AC100812.1-201ENST00000607622 580 ntBASIC1.34□□□□□ -2.19
VEGFDO43915 AC010999.1-201ENST00000611856 324 ntBASIC1.34□□□□□ -2.19
VEGFDO43915 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.34□□□□□ -2.19
VEGFDO43915 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
VEGFDO43915 Y_RNA.184-201ENST00000363884 108 ntBASIC1.33□□□□□ -2.2
VEGFDO43915 SNORD87-201ENST00000364849 89 ntBASIC1.33□□□□□ -2.2
VEGFDO43915 Y_RNA.327-201ENST00000365201 102 ntBASIC1.33□□□□□ -2.2
VEGFDO43915 RNU4-12P-201ENST00000365233 139 ntBASIC1.33□□□□□ -2.2
VEGFDO43915 RNA5SP259-201ENST00000365541 109 ntBASIC1.33□□□□□ -2.2
VEGFDO43915 Y_RNA.415-201ENST00000384012 112 ntBASIC1.33□□□□□ -2.2
VEGFDO43915 MRPL42P3-201ENST00000401492 326 ntBASIC1.33□□□□□ -2.2
VEGFDO43915 AL034345.1-201ENST00000407768 123 ntBASIC1.33□□□□□ -2.2
VEGFDO43915 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.33□□□□□ -2.2
VEGFDO43915 MTND1P17-201ENST00000448961 204 ntBASIC1.33□□□□□ -2.2
VEGFDO43915 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.33□□□□□ -2.2
VEGFDO43915 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.33□□□□□ -2.2
VEGFDO43915 MTCYBP18-201ENST00000501056 747 ntBASIC1.33□□□□□ -2.2
VEGFDO43915 RNU6-1114P-201ENST00000516022 107 ntBASIC1.33□□□□□ -2.2
VEGFDO43915 RNU6-566P-201ENST00000516790 107 ntBASIC1.33□□□□□ -2.2
VEGFDO43915 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.33□□□□□ -2.2
VEGFDO43915 AL121579.1-201ENST00000555129 305 ntBASIC1.33□□□□□ -2.2
VEGFDO43915 AL160236.1-201ENST00000556317 195 ntBASIC1.33□□□□□ -2.2
VEGFDO43915 AL929325.1-201ENST00000603096 117 ntBASIC1.33□□□□□ -2.2
VEGFDO43915 AL157834.3-201ENST00000615543 103 ntBASIC1.33□□□□□ -2.2
VEGFDO43915 MIR8065-201ENST00000620577 100 ntBASIC1.33□□□□□ -2.2
VEGFDO43915 MIR3662-201ENST00000637030 95 ntBASIC1.33□□□□□ -2.2
VEGFDO43915 U6.108-201ENST00000637764 58 ntBASIC1.33□□□□□ -2.2
VEGFDO43915 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
VEGFDO43915 MIR26B-201ENST00000362251 77 ntBASIC1.32□□□□□ -2.2
VEGFDO43915 Y_RNA.226-201ENST00000364337 114 ntBASIC1.32□□□□□ -2.2
VEGFDO43915 Y_RNA.295-201ENST00000364918 102 ntBASIC1.32□□□□□ -2.2
VEGFDO43915 RNU6-306P-201ENST00000384617 107 ntBASIC1.32□□□□□ -2.2
VEGFDO43915 RNU1-139P-201ENST00000391307 165 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms