Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AL049545.1-201ENST00000401856 572 ntBASIC0.43□□□□□ -2.34
HHLA3Q9XRX5 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.43□□□□□ -2.34
HHLA3Q9XRX5 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.43□□□□□ -2.34
HHLA3Q9XRX5 TPT1P7-201ENST00000458300 517 ntBASIC0.43□□□□□ -2.34
HHLA3Q9XRX5 RNU7-63P-201ENST00000459054 62 ntBASIC0.43□□□□□ -2.34
HHLA3Q9XRX5 RNU7-21P-201ENST00000459430 62 ntBASIC0.43□□□□□ -2.34
HHLA3Q9XRX5 BET1P1-201ENST00000482276 359 ntBASIC0.43□□□□□ -2.34
HHLA3Q9XRX5 RNU7-99P-201ENST00000516271 62 ntBASIC0.43□□□□□ -2.34
HHLA3Q9XRX5 MTND1P35-201ENST00000526739 508 ntBASIC0.43□□□□□ -2.34
HHLA3Q9XRX5 APOOP3-201ENST00000536787 586 ntBASIC0.43□□□□□ -2.34
HHLA3Q9XRX5 AL137100.2-201ENST00000555786 315 ntBASIC0.43□□□□□ -2.34
HHLA3Q9XRX5 AL162424.1-201ENST00000602325 221 ntBASIC0.43□□□□□ -2.34
HHLA3Q9XRX5 AC068790.6-201ENST00000602558 258 ntBASIC0.43□□□□□ -2.34
HHLA3Q9XRX5 AL360219.1-201ENST00000610230 366 ntBASIC0.43□□□□□ -2.34
HHLA3Q9XRX5 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.43□□□□□ -2.34
HHLA3Q9XRX5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.43□□□□□ -2.34
HHLA3Q9XRX5 AC137590.2-201ENST00000619709 240 ntBASIC0.43□□□□□ -2.34
HHLA3Q9XRX5 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 RNU6-784P-201ENST00000384330 106 ntBASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 SNORA26.8-201ENST00000391306 124 ntBASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 AL451046.2-201ENST00000403074 277 ntBASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 MIR1185-2-201ENST00000408687 86 ntBASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 MIR548J-201ENST00000408833 112 ntBASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 CALM2P4-201ENST00000430810 426 ntBASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 AL035398.1-201ENST00000430869 322 ntBASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 AL445305.1-201ENST00000432577 575 ntBASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 STAG3L5P-204ENST00000443759 179 ntBASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 RPL23AP75-201ENST00000491601 451 ntBASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 AC087854.1-201ENST00000519706 414 ntBASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 AP003484.1-201ENST00000530974 250 ntBASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 AC004812.1-201ENST00000540773 146 ntBASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 PRELID3BP2-201ENST00000605362 201 ntBASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 AL353765.1-201ENST00000605514 183 ntBASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 SNORD11B-201ENST00000607707 90 ntBASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 MIR6788-201ENST00000618842 66 ntBASIC0.42□□□□□ -2.34
HHLA3Q9XRX5 RNU4-12P-201ENST00000365233 139 ntBASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 RNU6-424P-201ENST00000384367 105 ntBASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 U8.16-201ENST00000391279 133 ntBASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 AL606923.1-201ENST00000406616 190 ntBASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 MIR320B2-201ENST00000408479 138 ntBASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 RNU6-325P-201ENST00000411132 105 ntBASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 USP9YP29-201ENST00000445112 563 ntBASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 AL157398.1-201ENST00000452981 186 ntBASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 AC093850.1-201ENST00000454121 251 ntBASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 MTCO2P18-201ENST00000457151 658 ntBASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 TPTE2P5-203ENST00000458118 728 ntBASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 snoU13.25-201ENST00000458945 104 ntBASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 MTCO3P38-201ENST00000468910 766 ntBASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 COX6CP6-201ENST00000490840 228 ntBASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 RNU6-189P-201ENST00000516120 101 ntBASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 RNU6-1038P-201ENST00000516516 104 ntBASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 AP002001.1-203ENST00000534002 267 ntBASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 AC011604.1-201ENST00000545978 196 ntBASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 AL157687.1-201ENST00000554853 619 ntBASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 AL118558.2-201ENST00000556294 238 ntBASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 CPDP1-201ENST00000579660 283 ntBASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 AC104465.1-201ENST00000611365 139 ntBASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 AC103705.1-201ENST00000619013 241 ntBASIC0.41□□□□□ -2.34
HHLA3Q9XRX5 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 Y_RNA.100-201ENST00000363141 102 ntBASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 RNU6-1335P-201ENST00000365426 107 ntBASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 SNORA2.2-201ENST00000365473 135 ntBASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 Y_RNA.381-201ENST00000365666 102 ntBASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 RNU6-1158P-201ENST00000391167 107 ntBASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 AL663109.1-201ENST00000411498 844 ntBASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 AL365203.2-201ENST00000423444 196 ntBASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 RPEP5-201ENST00000441137 268 ntBASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 AL049830.1-201ENST00000468034 425 ntBASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 RPS27P22-201ENST00000478056 241 ntBASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 AC022493.2-201ENST00000506122 481 ntBASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 AC091133.4-201ENST00000511142 308 ntBASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 AC092436.3-201ENST00000511788 257 ntBASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 RNU6-430P-201ENST00000517078 107 ntBASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 MIR5692C1-201ENST00000585309 91 ntBASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 AC087683.1-201ENST00000591187 441 ntBASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 AL078603.1-201ENST00000603824 313 ntBASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 AL357312.1-201ENST00000603879 298 ntBASIC0.4□□□□□ -2.35
HHLA3Q9XRX5 AL121757.2-201ENST00000611223 313 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms