Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AC073349.3-201ENST00000617616 186 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 MTND1P7-201ENST00000632801 297 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 AC022336.2-201ENST00000568966 2538 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 AC233981.2-201ENST00000611524 1614 ntBASIC2.39□□□□□ -2.03
USP43Q70EL4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
USP43Q70EL4 AC009541.1-201ENST00000438279 2662 ntBASIC2.38□□□□□ -2.03
USP43Q70EL4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
USP43Q70EL4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
USP43Q70EL4 MIR410-201ENST00000362222 80 ntBASIC2.38□□□□□ -2.03
USP43Q70EL4 SNORD32A-201ENST00000364805 84 ntBASIC2.38□□□□□ -2.03
USP43Q70EL4 Y_RNA.343-201ENST00000365354 112 ntBASIC2.38□□□□□ -2.03
USP43Q70EL4 RNU6-898P-201ENST00000365627 104 ntBASIC2.38□□□□□ -2.03
USP43Q70EL4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
USP43Q70EL4 RNU6-1286P-201ENST00000383871 107 ntBASIC2.38□□□□□ -2.03
USP43Q70EL4 Y_RNA.570-201ENST00000384750 101 ntBASIC2.38□□□□□ -2.03
USP43Q70EL4 RPL23AP95-201ENST00000426806 265 ntBASIC2.38□□□□□ -2.03
USP43Q70EL4 IFNA11P-201ENST00000446352 526 ntBASIC2.38□□□□□ -2.03
USP43Q70EL4 AC007395.1-201ENST00000451333 677 ntBASIC2.38□□□□□ -2.03
USP43Q70EL4 RPL23AP70-201ENST00000483361 460 ntBASIC2.38□□□□□ -2.03
USP43Q70EL4 RNU6-966P-201ENST00000516479 104 ntBASIC2.38□□□□□ -2.03
USP43Q70EL4 SNORD116-25-201ENST00000516517 92 ntBASIC2.38□□□□□ -2.03
USP43Q70EL4 RNU6-919P-201ENST00000516731 104 ntBASIC2.38□□□□□ -2.03
USP43Q70EL4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.38□□□□□ -2.03
USP43Q70EL4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.38□□□□□ -2.03
USP43Q70EL4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.38□□□□□ -2.03
USP43Q70EL4 MIR5692C2-201ENST00000577959 77 ntBASIC2.38□□□□□ -2.03
USP43Q70EL4 AC091895.1-201ENST00000624494 256 ntBASIC2.38□□□□□ -2.03
USP43Q70EL4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
USP43Q70EL4 AC131280.1-202ENST00000624067 4211 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 RNU4-82P-201ENST00000362443 140 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 RNA5SP361-201ENST00000362686 118 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 RNU6-449P-201ENST00000383914 107 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 RNU6-968P-201ENST00000384076 107 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 RNA5SP354-201ENST00000391247 136 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 RNU1-139P-201ENST00000391307 165 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 MIR888-201ENST00000401186 77 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 RNU5A-5P-201ENST00000411054 116 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 RNA5SP508-201ENST00000411327 119 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 AC087499.2-201ENST00000432861 149 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 AC008267.6-201ENST00000441664 139 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 AC007969.2-201ENST00000441891 191 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 AC009296.1-201ENST00000443146 155 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.37□□□□□ -2.03
USP43Q70EL4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.37□□□□□ -2.03
USP43Q70EL4 AC011753.1-201ENST00000451001 220 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 AL109933.2-201ENST00000452651 260 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 AC006026.2-201ENST00000457376 180 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 AF186996.7-201ENST00000492781 209 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 AC091874.1-201ENST00000511402 339 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 RNU5F-8P-201ENST00000515941 111 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.37□□□□□ -2.03
USP43Q70EL4 MIR4635-201ENST00000583759 79 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 AC008749.1-201ENST00000597650 306 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 RMST_6.1-201ENST00000611980 203 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 MIR6895-201ENST00000613497 78 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 SNORA43.4-201ENST00000629559 138 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 MIR203B-201ENST00000636080 86 ntBASIC2.37□□□□□ -2.03
USP43Q70EL4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
USP43Q70EL4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.37□□□□□ -2.03
USP43Q70EL4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.37□□□□□ -2.03
USP43Q70EL4 AC005336.3-201ENST00000623833 2679 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
USP43Q70EL4 SNORA25.1-201ENST00000362326 128 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 RNU6-626P-201ENST00000363354 107 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 RNU6-527P-201ENST00000363425 104 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 RNU6-961P-201ENST00000363893 105 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 RNU4-84P-201ENST00000364200 139 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 RNU6-198P-201ENST00000384258 104 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 MIR9-1-201ENST00000385198 89 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
USP43Q70EL4 SNORD12B-201ENST00000410433 91 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 EIF1AXP1-201ENST00000419267 435 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.36□□□□□ -2.03
USP43Q70EL4 AC099548.1-201ENST00000421443 426 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 AC124916.1-201ENST00000444020 547 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 MRPS10P1-201ENST00000448483 130 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 EEF1B2P7-201ENST00000451177 676 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 RPL23AP3-201ENST00000453844 468 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 RPL23AP49-201ENST00000492925 468 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.36□□□□□ -2.03
USP43Q70EL4 RNU7-121P-201ENST00000516604 62 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 RNU6-567P-201ENST00000516746 107 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.36□□□□□ -2.03
USP43Q70EL4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.36□□□□□ -2.03
USP43Q70EL4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.36□□□□□ -2.03
USP43Q70EL4 CR383656.8-201ENST00000549046 145 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 AC112693.2-201ENST00000556538 232 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 AC233702.2-202ENST00000562547 291 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.36□□□□□ -2.03
USP43Q70EL4 AL356157.2-201ENST00000605122 111 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 AC005828.6-201ENST00000606610 232 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 AL109809.4-201ENST00000603520 2185 ntBASIC2.36□□□□□ -2.03
USP43Q70EL4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USP43Q70EL4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.35□□□□□ -2.03
USP43Q70EL4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
USP43Q70EL4 Y_RNA.71-201ENST00000362892 104 ntBASIC2.35□□□□□ -2.03
USP43Q70EL4 RNU5B-2P-201ENST00000363036 113 ntBASIC2.35□□□□□ -2.03
USP43Q70EL4 Y_RNA.127-201ENST00000363386 109 ntBASIC2.35□□□□□ -2.03
USP43Q70EL4 RNU6-1325P-201ENST00000364905 105 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms