| CD99 | P14209 | U6atac.1-201 | ENST00000616025 | 117 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC092794.2-201 | ENST00000620933 | 563 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC008781.3-201 | ENST00000622826 | 335 nt | TSL 2 BASIC | 1.03 | □□□□□ -2.24 | | |
| CD99 | P14209 | AL450472.1-202 | ENST00000637286 | 180 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC112487.2-201 | ENST00000637950 | 304 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CD99 | P14209 | AC099654.14-201 | ENST00000638599 | 341 nt | BASIC | 1.03 | □□□□□ -2.24 | | |
| CD99 | P14209 | LRRIQ1-202 | ENST00000393217 | 5394 nt | APPRIS P1 TSL 1 (best) BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | Y_RNA.48-201 | ENST00000362710 | 103 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | Y_RNA.58-201 | ENST00000362807 | 102 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | Y_RNA.132-201 | ENST00000363421 | 102 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | Y_RNA.135-201 | ENST00000363439 | 95 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | SNORA72.1-201 | ENST00000363485 | 129 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | Y_RNA.154-201 | ENST00000363624 | 102 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | SNORD113-7-201 | ENST00000363762 | 77 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | RNY3P1-201 | ENST00000365085 | 102 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | Y_RNA.339-201 | ENST00000365325 | 102 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | RNY3-201 | ENST00000365484 | 102 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | Y_RNA.474-201 | ENST00000384341 | 102 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | Y_RNA.490-201 | ENST00000384413 | 102 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | TRAJ21-201 | ENST00000390516 | 55 nt | APPRIS P1 BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | LINC01853-201 | ENST00000417715 | 444 nt | TSL 3 BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | AC139712.2-201 | ENST00000424302 | 339 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | AC027119.1-201 | ENST00000440877 | 241 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | AC243964.1-201 | ENST00000441814 | 261 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | AC007969.2-201 | ENST00000441891 | 191 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | AL031274.1-201 | ENST00000450334 | 232 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | RNU1-131P-201 | ENST00000458943 | 161 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | RNU6-329P-201 | ENST00000459618 | 107 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | RPL30P7-201 | ENST00000479312 | 323 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | AC069528.1-201 | ENST00000490344 | 705 nt | TSL 3 BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | Y_RNA.654-201 | ENST00000497848 | 106 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | AC008628.2-201 | ENST00000502605 | 298 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | MTND5P9-201 | ENST00000503854 | 1755 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | AC097473.1-201 | ENST00000508142 | 408 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | RNU6-864P-201 | ENST00000516256 | 108 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | RNU6-277P-201 | ENST00000516272 | 106 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | MDM2-221 | ENST00000517852 | 393 nt | TSL 1 (best) BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | RNU6-323P-201 | ENST00000521915 | 107 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | AL357078.3-201 | ENST00000607528 | 618 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | AC025253.1-201 | ENST00000613623 | 543 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | DLEU2_5.1-201 | ENST00000615567 | 84 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | KCNQ1OT1_3.1-201 | ENST00000616504 | 116 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | SNORA43.4-201 | ENST00000629559 | 138 nt | BASIC | 1.02 | □□□□□ -2.25 | | |
| CD99 | P14209 | RNU6-1317P-201 | ENST00000364582 | 104 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | RNU1-133P-201 | ENST00000364867 | 167 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | Y_RNA.404-201 | ENST00000383978 | 102 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | Y_RNA.414-201 | ENST00000384011 | 101 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | RNU6-842P-201 | ENST00000384269 | 107 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | RNU6-434P-201 | ENST00000384376 | 107 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | Y_RNA.529-201 | ENST00000384586 | 119 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | MIR548F5-201 | ENST00000408421 | 86 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | SNRPG-202 | ENST00000413456 | 398 nt | TSL 3 BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | MS4A4E-203 | ENST00000425663 | 350 nt | TSL 1 (best) BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | KCNMA1-AS2-201 | ENST00000428936 | 427 nt | TSL 3 BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | RPS29P29-201 | ENST00000456396 | 171 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | ATP1B3-AS1-201 | ENST00000492725 | 376 nt | TSL 5 BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | AC104136.1-201 | ENST00000512969 | 394 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | AC025465.4-201 | ENST00000513422 | 638 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | SNORA19.2-201 | ENST00000516013 | 114 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | RNU5F-2P-201 | ENST00000516066 | 82 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | Y_RNA.682-201 | ENST00000516457 | 100 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | RNU6-875P-201 | ENST00000516488 | 106 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | RNU6-256P-201 | ENST00000516747 | 97 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | SNORA31.16-201 | ENST00000516773 | 139 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | RNU7-30P-201 | ENST00000516835 | 62 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | MRPS36P4-201 | ENST00000534436 | 298 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | RAB11AP2-201 | ENST00000545905 | 639 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | AL121579.1-201 | ENST00000555129 | 305 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | POLR3GP2-201 | ENST00000588366 | 668 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | AL590095.2-201 | ENST00000604136 | 117 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | MIR3976-201 | ENST00000606807 | 139 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | ST7-OT4_2.1-201 | ENST00000619089 | 172 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | U4.7-201 | ENST00000638126 | 106 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | RBMS2-209 | ENST00000639027 | 192 nt | TSL 5 BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | AC100821.1-201 | ENST00000523153 | 2479 nt | BASIC | 1.01 | □□□□□ -2.25 | | |
| CD99 | P14209 | C9orf84-201 | ENST00000318737 | 4661 nt | APPRIS P3 TSL 1 (best) BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | DEUP1-202 | ENST00000525646 | 1920 nt | TSL 1 (best) BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | RNU6-105P-201 | ENST00000363909 | 104 nt | BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | SNORD32B-201 | ENST00000364460 | 84 nt | BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | SNORD32A-201 | ENST00000364805 | 84 nt | BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | RNU6-1329P-201 | ENST00000365664 | 107 nt | BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | Y_RNA.481-201 | ENST00000384373 | 102 nt | BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | SNORD116-29-201 | ENST00000384516 | 83 nt | BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | SNORA12-201 | ENST00000391162 | 147 nt | BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | RAP1BP3-201 | ENST00000407180 | 549 nt | BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | Y_RNA.604-201 | ENST00000410574 | 102 nt | BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | RNU6-325P-201 | ENST00000411132 | 105 nt | BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | RNU6-387P-201 | ENST00000411331 | 105 nt | BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | PSPC1-AS2-201 | ENST00000423023 | 376 nt | TSL 3 BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | MTND3P9-201 | ENST00000429526 | 346 nt | BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | SIRPG-AS1-201 | ENST00000437384 | 410 nt | TSL 3 BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | SNRPEP8-201 | ENST00000442866 | 260 nt | BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | AL357873.1-201 | ENST00000449215 | 282 nt | TSL 3 BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | AC013470.1-201 | ENST00000453438 | 462 nt | BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | AC079140.2-201 | ENST00000506193 | 142 nt | BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | AC096711.1-201 | ENST00000510967 | 347 nt | TSL 5 BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | RNA5SP384-201 | ENST00000516615 | 116 nt | BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | AP003097.2-201 | ENST00000530126 | 178 nt | TSL 3 BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | MIR548S-201 | ENST00000581352 | 82 nt | BASIC | 1 | □□□□□ -2.25 | | |
| CD99 | P14209 | AC211469.2-201 | ENST00000605461 | 205 nt | BASIC | 1 | □□□□□ -2.25 | | |